Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames

Most Atlantic salmon production takes place in large sea cages where there are limited opportunities to record growth on individual fish. This limits management capabilities for monitoring mean weight and thus total biomass, pellet sizes, feed volumes and the estimation of time until harvest. Furthe...

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Published in:Computers and Electronics in Agriculture
Main Authors: Difford, Gareth Frank, Boison, Solomon Antwi, Khaw, Hooi Ling, Gjerde, Bjarne
Format: Article in Journal/Newspaper
Language:English
Published: 2020
Subjects:
Online Access:https://hdl.handle.net/11250/2660618
https://doi.org/10.1016/j.compag.2020.105411
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spelling ftnofima:oai:nofima.brage.unit.no:11250/2660618 2023-05-15T15:31:05+02:00 Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames Difford, Gareth Frank Boison, Solomon Antwi Khaw, Hooi Ling Gjerde, Bjarne 2020 application/pdf https://hdl.handle.net/11250/2660618 https://doi.org/10.1016/j.compag.2020.105411 eng eng Norges forskningsråd: 267650 Computers and Electronics in Agriculture. 2020, 173 1-8. urn:issn:0168-1699 https://hdl.handle.net/11250/2660618 https://doi.org/10.1016/j.compag.2020.105411 cristin:1817714 1-8 173 Computers and Electronics in Agriculture Peer reviewed Journal article 2020 ftnofima https://doi.org/10.1016/j.compag.2020.105411 2022-11-18T06:51:08Z Most Atlantic salmon production takes place in large sea cages where there are limited opportunities to record growth on individual fish. This limits management capabilities for monitoring mean weight and thus total biomass, pellet sizes, feed volumes and the estimation of time until harvest. Furthermore, cause and effect of perturbations and arrested growth cannot be established or interceded on and genetic selection is limited to stocking and harvest measurements. The fusion of passive integrated transponder (PIT) identification and diode frames offers the possibility to noninvasively monitor the growth on thousands of individual fish. However, the accuracy of diode frame measurements for population- and individual level growth and biomass estimation has not been assessed. We stocked over 5000 individually PIT tagged Atlantic salmon post smolts in a net-cage in the sea and monitored growth using a diode frame and PIT tag reader. At the end of the growth period all fish were measured for body length and weight using the intensive gold standard methods of manual recording. At the population level diode frames were highly accurate with a mean difference of 0.002% for length and 4% for weight. Individual level length and weight records were repeatable 0.34 and 0.35, respectively. A single measurement at individual level from diode frames were moderately concordant with the gold standard measures (concordance correlation coefficient (CCC) of 0.52 for length and 0.57 for weight). By exploiting the repeatability and high throughput of diode frame measurements it was possible to increase the number of records per fish to a maximum of 5 resulting in CCC of up to 0.88 for length and 0.81 for weight. Diode frame measurements may hold promise for continuous growth measurements at sea needed in genetic evaluations. publishedVersion Article in Journal/Newspaper Atlantic salmon Nofima Knowledge Archive (Brage) Computers and Electronics in Agriculture 173 105411
institution Open Polar
collection Nofima Knowledge Archive (Brage)
op_collection_id ftnofima
language English
description Most Atlantic salmon production takes place in large sea cages where there are limited opportunities to record growth on individual fish. This limits management capabilities for monitoring mean weight and thus total biomass, pellet sizes, feed volumes and the estimation of time until harvest. Furthermore, cause and effect of perturbations and arrested growth cannot be established or interceded on and genetic selection is limited to stocking and harvest measurements. The fusion of passive integrated transponder (PIT) identification and diode frames offers the possibility to noninvasively monitor the growth on thousands of individual fish. However, the accuracy of diode frame measurements for population- and individual level growth and biomass estimation has not been assessed. We stocked over 5000 individually PIT tagged Atlantic salmon post smolts in a net-cage in the sea and monitored growth using a diode frame and PIT tag reader. At the end of the growth period all fish were measured for body length and weight using the intensive gold standard methods of manual recording. At the population level diode frames were highly accurate with a mean difference of 0.002% for length and 4% for weight. Individual level length and weight records were repeatable 0.34 and 0.35, respectively. A single measurement at individual level from diode frames were moderately concordant with the gold standard measures (concordance correlation coefficient (CCC) of 0.52 for length and 0.57 for weight). By exploiting the repeatability and high throughput of diode frame measurements it was possible to increase the number of records per fish to a maximum of 5 resulting in CCC of up to 0.88 for length and 0.81 for weight. Diode frame measurements may hold promise for continuous growth measurements at sea needed in genetic evaluations. publishedVersion
format Article in Journal/Newspaper
author Difford, Gareth Frank
Boison, Solomon Antwi
Khaw, Hooi Ling
Gjerde, Bjarne
spellingShingle Difford, Gareth Frank
Boison, Solomon Antwi
Khaw, Hooi Ling
Gjerde, Bjarne
Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames
author_facet Difford, Gareth Frank
Boison, Solomon Antwi
Khaw, Hooi Ling
Gjerde, Bjarne
author_sort Difford, Gareth Frank
title Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames
title_short Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames
title_full Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames
title_fullStr Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames
title_full_unstemmed Validating non-invasive growth measurements on individual Atlantic salmon in sea cages using diode frames
title_sort validating non-invasive growth measurements on individual atlantic salmon in sea cages using diode frames
publishDate 2020
url https://hdl.handle.net/11250/2660618
https://doi.org/10.1016/j.compag.2020.105411
genre Atlantic salmon
genre_facet Atlantic salmon
op_source 1-8
173
Computers and Electronics in Agriculture
op_relation Norges forskningsråd: 267650
Computers and Electronics in Agriculture. 2020, 173 1-8.
urn:issn:0168-1699
https://hdl.handle.net/11250/2660618
https://doi.org/10.1016/j.compag.2020.105411
cristin:1817714
op_doi https://doi.org/10.1016/j.compag.2020.105411
container_title Computers and Electronics in Agriculture
container_volume 173
container_start_page 105411
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