Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island

Cryotolerance in microorganisms from polar regions provides their survival through alternating freezing and thawing cycles. Our research was aimed at biodiversity analysis of culturable bacteria from the King George Island near Antarctica including their antibiotic resistance and cold-adaptive enzym...

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Published in:Polar Science
Format: Article in Journal/Newspaper
Language:English
Published: 2022
Subjects:
Online Access:https://nipr.repo.nii.ac.jp/?action=repository_uri&item_id=16903
http://id.nii.ac.jp/1291/00016772/
id ftnipr:oai:nipr.repo.nii.ac.jp:00016903
record_format openpolar
spelling ftnipr:oai:nipr.repo.nii.ac.jp:00016903 2023-05-15T13:49:00+02:00 Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island 2022-03 https://nipr.repo.nii.ac.jp/?action=repository_uri&item_id=16903 http://id.nii.ac.jp/1291/00016772/ en eng https://doi.org/10.1016/j.polar.2021.100756 https://nipr.repo.nii.ac.jp/?action=repository_uri&item_id=16903 http://id.nii.ac.jp/1291/00016772/ Polar Science, 31, 100756(2022-03) 18739652 Culturable psychrophilic eubacteria 16S rRNA gene phylogenetic analysis Plasmids Alkaline phosphatases Lipases Exo- and restriction endonucleases Journal Article 2022 ftnipr https://doi.org/10.1016/j.polar.2021.100756 2022-12-03T19:43:26Z Cryotolerance in microorganisms from polar regions provides their survival through alternating freezing and thawing cycles. Our research was aimed at biodiversity analysis of culturable bacteria from the King George Island near Antarctica including their antibiotic resistance and cold-adaptive enzymes. Average bacterial density was estimated as 3 × 106 cells/mL but the number of colony-forming units (CFU) was essentially lower - (3.2–9.2)x103 cells/mL. Totally, 83 stable strains were isolated and identified using phylogenetic analysis of 16S rRNA gene nucleotide sequences and phenotypic traits. Main groups were the Gram-negative Pseudomonas and Duganella species as well as Gram-positive Arthrobacter spp. Besides, eubacteria Psychrobacter, Flavobacterium, Clavibacter, Aquaspirillum, Polaromonas, Actinibacterium, Shewanella, Kocuria and families Comamonadacea, Actinobacteridae were found. Genetic diversity of the bacteria was elevated with plasmids of different lengths in 33 strains but no correlation between the plasmids content and antibiotic resistance was found. Among cold-adapted enzymes antioxidant catalases (91.5%), peroxidases (57.5%), alkaline phosphatases (42.2%) prevailed; unspecific exonucleases were revealed in 16.9% strains and restriction endonucleases of type II - in 8.4% strains only. Lypases were detected in 24 strains (28.9%) and could facilitate membrane fluidity at low temperatures. Despite the antibiotic resistance the Antarctic cultivable eubacteria are mainly not pathogenic and may serve as sources of plasmids and cold-adapted enzymes for biotechnology. Article in Journal/Newspaper Antarc* Antarctic Antarctica King George Island Polar Science Polar Science National Institute of Polar Research Repository, Japan Antarctic The Antarctic King George Island Polar Science 31 100756
institution Open Polar
collection National Institute of Polar Research Repository, Japan
op_collection_id ftnipr
language English
topic Culturable psychrophilic eubacteria
16S rRNA gene phylogenetic analysis
Plasmids
Alkaline phosphatases
Lipases
Exo- and restriction endonucleases
spellingShingle Culturable psychrophilic eubacteria
16S rRNA gene phylogenetic analysis
Plasmids
Alkaline phosphatases
Lipases
Exo- and restriction endonucleases
Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island
topic_facet Culturable psychrophilic eubacteria
16S rRNA gene phylogenetic analysis
Plasmids
Alkaline phosphatases
Lipases
Exo- and restriction endonucleases
description Cryotolerance in microorganisms from polar regions provides their survival through alternating freezing and thawing cycles. Our research was aimed at biodiversity analysis of culturable bacteria from the King George Island near Antarctica including their antibiotic resistance and cold-adaptive enzymes. Average bacterial density was estimated as 3 × 106 cells/mL but the number of colony-forming units (CFU) was essentially lower - (3.2–9.2)x103 cells/mL. Totally, 83 stable strains were isolated and identified using phylogenetic analysis of 16S rRNA gene nucleotide sequences and phenotypic traits. Main groups were the Gram-negative Pseudomonas and Duganella species as well as Gram-positive Arthrobacter spp. Besides, eubacteria Psychrobacter, Flavobacterium, Clavibacter, Aquaspirillum, Polaromonas, Actinibacterium, Shewanella, Kocuria and families Comamonadacea, Actinobacteridae were found. Genetic diversity of the bacteria was elevated with plasmids of different lengths in 33 strains but no correlation between the plasmids content and antibiotic resistance was found. Among cold-adapted enzymes antioxidant catalases (91.5%), peroxidases (57.5%), alkaline phosphatases (42.2%) prevailed; unspecific exonucleases were revealed in 16.9% strains and restriction endonucleases of type II - in 8.4% strains only. Lypases were detected in 24 strains (28.9%) and could facilitate membrane fluidity at low temperatures. Despite the antibiotic resistance the Antarctic cultivable eubacteria are mainly not pathogenic and may serve as sources of plasmids and cold-adapted enzymes for biotechnology.
format Article in Journal/Newspaper
title Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island
title_short Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island
title_full Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island
title_fullStr Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island
title_full_unstemmed Antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from King George Island
title_sort antibiotic resistance and cold-adaptive enzymes of antarctic culturable bacteria from king george island
publishDate 2022
url https://nipr.repo.nii.ac.jp/?action=repository_uri&item_id=16903
http://id.nii.ac.jp/1291/00016772/
geographic Antarctic
The Antarctic
King George Island
geographic_facet Antarctic
The Antarctic
King George Island
genre Antarc*
Antarctic
Antarctica
King George Island
Polar Science
Polar Science
genre_facet Antarc*
Antarctic
Antarctica
King George Island
Polar Science
Polar Science
op_relation https://doi.org/10.1016/j.polar.2021.100756
https://nipr.repo.nii.ac.jp/?action=repository_uri&item_id=16903
http://id.nii.ac.jp/1291/00016772/
Polar Science, 31, 100756(2022-03)
18739652
op_doi https://doi.org/10.1016/j.polar.2021.100756
container_title Polar Science
container_volume 31
container_start_page 100756
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