Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory

An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral ( Lophelia pertusa ) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing ch...

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Published in:Scientific Reports
Main Authors: Osterloff, J., Nilssen, I., Järnegren, J., van Engeland, T., Buhl-Mortensen, P., Nattkemper, T.W.
Format: Article in Journal/Newspaper
Language:English
Published: 2019
Subjects:
Online Access:https://www.vliz.be/imisdocs/publications/82/330182.pdf
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spelling ftnioz:oai:imis.nioz.nl:310806 2023-05-15T17:08:18+02:00 Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory Osterloff, J. Nilssen, I. Järnegren, J. van Engeland, T. Buhl-Mortensen, P. Nattkemper, T.W. 2019 application/pdf https://www.vliz.be/imisdocs/publications/82/330182.pdf en eng info:eu-repo/semantics/altIdentifier/wos/000466127100003 info:eu-repo/semantics/altIdentifier/doi/doi.org/10.1038/s41598-019-41275-1 https://www.vliz.be/imisdocs/publications/82/330182.pdf info:eu-repo/semantics/openAccess %3Ci%3ENPG+Scientific+Reports+9%281%29%3C%2Fi%3E%3A+6578.+%3Ca+href%3D%22https%3A%2F%2Fdx.doi.org%2F10.1038%2Fs41598-019-41275-1%22+target%3D%22_blank%22%3Ehttps%3A%2F%2Fdx.doi.org%2F10.1038%2Fs41598-019-41275-1%3C%2Fa%3E lophelia pertusa [spider hazards] info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2019 ftnioz https://doi.org/10.1038/s41598-019-41275-1 2022-05-01T14:09:30Z An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral ( Lophelia pertusa ) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing changes in coral colour and polyp activity (feeding). The image data was analysed together with data from the other sensors from the same period, to provide new insights into the short- and long-term dynamics in polyp features. The results indicate that diurnal variations and tidal current influenced polyp activity, by controlling the food supply. On a longer time-scale, the coral’s tissue colour changed from white in the spring to slightly red during the summer months, which can be explained by a seasonal change in food supply. Our work shows, that using an effective integrative computational approach, the image time series is a new and rich source of information to understand and monitor the dynamics in underwater environments due to the high temporal resolution and coverage enabled with FUOs. Article in Journal/Newspaper Lofoten Lophelia pertusa Vesterålen NIOZ Repository (Royal Netherlands Institute for Sea Research) Lofoten Vesterålen ENVELOPE(14.939,14.939,68.754,68.754) Scientific Reports 9 1
institution Open Polar
collection NIOZ Repository (Royal Netherlands Institute for Sea Research)
op_collection_id ftnioz
language English
topic lophelia pertusa [spider hazards]
spellingShingle lophelia pertusa [spider hazards]
Osterloff, J.
Nilssen, I.
Järnegren, J.
van Engeland, T.
Buhl-Mortensen, P.
Nattkemper, T.W.
Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
topic_facet lophelia pertusa [spider hazards]
description An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral ( Lophelia pertusa ) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing changes in coral colour and polyp activity (feeding). The image data was analysed together with data from the other sensors from the same period, to provide new insights into the short- and long-term dynamics in polyp features. The results indicate that diurnal variations and tidal current influenced polyp activity, by controlling the food supply. On a longer time-scale, the coral’s tissue colour changed from white in the spring to slightly red during the summer months, which can be explained by a seasonal change in food supply. Our work shows, that using an effective integrative computational approach, the image time series is a new and rich source of information to understand and monitor the dynamics in underwater environments due to the high temporal resolution and coverage enabled with FUOs.
format Article in Journal/Newspaper
author Osterloff, J.
Nilssen, I.
Järnegren, J.
van Engeland, T.
Buhl-Mortensen, P.
Nattkemper, T.W.
author_facet Osterloff, J.
Nilssen, I.
Järnegren, J.
van Engeland, T.
Buhl-Mortensen, P.
Nattkemper, T.W.
author_sort Osterloff, J.
title Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_short Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_full Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_fullStr Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_full_unstemmed Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_sort computer vision enables short- and long-term analysis of lophelia pertusa polyp behaviour and colour from an underwater observatory
publishDate 2019
url https://www.vliz.be/imisdocs/publications/82/330182.pdf
long_lat ENVELOPE(14.939,14.939,68.754,68.754)
geographic Lofoten
Vesterålen
geographic_facet Lofoten
Vesterålen
genre Lofoten
Lophelia pertusa
Vesterålen
genre_facet Lofoten
Lophelia pertusa
Vesterålen
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op_relation info:eu-repo/semantics/altIdentifier/wos/000466127100003
info:eu-repo/semantics/altIdentifier/doi/doi.org/10.1038/s41598-019-41275-1
https://www.vliz.be/imisdocs/publications/82/330182.pdf
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op_doi https://doi.org/10.1038/s41598-019-41275-1
container_title Scientific Reports
container_volume 9
container_issue 1
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