Linkage between copepods and bacteria in the North Atlantic Ocean
Copepods and bacteria are fundamental components of the pelagic food web andplay a major role in biogeochemical cycles. Marine bacteria have a free-living or particleattachedlifestyle, but as members of the microbial food web, the only biotic interaction of bacteriais commonly assumed to be with the...
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Language: | English |
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2014
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ftnioz:oai:imis.nioz.nl:241278 2023-05-15T17:33:25+02:00 Linkage between copepods and bacteria in the North Atlantic Ocean De Corte, D. Lekunberri, I. Sintes, E. Garcia, J.A.L. Gonzalez, S. Herndl, G.J. 2014 application/pdf https://www.vliz.be/imisdocs/publications/79/264079.pdf en eng info:eu-repo/semantics/altIdentifier/wos/000340220300003 info:eu-repo/semantics/altIdentifier/doi/oi.org/10.3354/ame01696 https://www.vliz.be/imisdocs/publications/79/264079.pdf info:eu-repo/semantics/openAccess %3Ci%3EAquat.+Microb.+Ecol.+72%3C%2Fi%3E%3A+215-225.+%3Ca+href%3D%22http%3A%2F%2Fdx.doi.org%2F10.3354%2Fame01696%22+target%3D%22_blank%22%3Ehttp%3A%2F%2Fdx.doi.org%2F10.3354%2Fame01696%3C%2Fa%3E info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2014 ftnioz https://doi.org/10.3354/ame01696 2022-05-01T14:00:09Z Copepods and bacteria are fundamental components of the pelagic food web andplay a major role in biogeochemical cycles. Marine bacteria have a free-living or particleattachedlifestyle, but as members of the microbial food web, the only biotic interaction of bacteriais commonly assumed to be with their predators (protists and/or viruses). However, acopepod’s body is highly enriched in organic matter and harbors a large and complex bacterialcommunity. The aim of this study was to compare the composition of the free-living bacterialcommunity of the open Atlantic to that associated with copepods. We used 454 highthroughputsequencing of the 16S rRNA gene to decipher the bacterial community compositionassociated with this zooplankton group and the ambient water. Significant differences werefound between the bacterial communities associated with the dominant copepod families(Calanoida: Centropagidae and Clausocalanidae; Cyclopoida: Corycaeidae, Oncaeidae, andLubbockiidae) and the ambient water. Bacilli and Actinobacteria dominated the copepodassociatedcommunity and Alphaproteobacteria, Deltaproteobacteria, and Synechococcus dominatedthe free-living community. However, the presence of shared bacterial operational taxonomicunits (OTUs) between these 2 distinct habitats suggests a dynamic exchange of bacteriabetween seawater and copepods. Taken together, our results support the hypothesis that theinterior and exterior surfaces of copepods provide a specific niche with a strong selective pressurefor bacteria. Article in Journal/Newspaper North Atlantic Copepods NIOZ Repository (Royal Netherlands Institute for Sea Research) Aquatic Microbial Ecology 72 3 215 225 |
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Open Polar |
collection |
NIOZ Repository (Royal Netherlands Institute for Sea Research) |
op_collection_id |
ftnioz |
language |
English |
description |
Copepods and bacteria are fundamental components of the pelagic food web andplay a major role in biogeochemical cycles. Marine bacteria have a free-living or particleattachedlifestyle, but as members of the microbial food web, the only biotic interaction of bacteriais commonly assumed to be with their predators (protists and/or viruses). However, acopepod’s body is highly enriched in organic matter and harbors a large and complex bacterialcommunity. The aim of this study was to compare the composition of the free-living bacterialcommunity of the open Atlantic to that associated with copepods. We used 454 highthroughputsequencing of the 16S rRNA gene to decipher the bacterial community compositionassociated with this zooplankton group and the ambient water. Significant differences werefound between the bacterial communities associated with the dominant copepod families(Calanoida: Centropagidae and Clausocalanidae; Cyclopoida: Corycaeidae, Oncaeidae, andLubbockiidae) and the ambient water. Bacilli and Actinobacteria dominated the copepodassociatedcommunity and Alphaproteobacteria, Deltaproteobacteria, and Synechococcus dominatedthe free-living community. However, the presence of shared bacterial operational taxonomicunits (OTUs) between these 2 distinct habitats suggests a dynamic exchange of bacteriabetween seawater and copepods. Taken together, our results support the hypothesis that theinterior and exterior surfaces of copepods provide a specific niche with a strong selective pressurefor bacteria. |
format |
Article in Journal/Newspaper |
author |
De Corte, D. Lekunberri, I. Sintes, E. Garcia, J.A.L. Gonzalez, S. Herndl, G.J. |
spellingShingle |
De Corte, D. Lekunberri, I. Sintes, E. Garcia, J.A.L. Gonzalez, S. Herndl, G.J. Linkage between copepods and bacteria in the North Atlantic Ocean |
author_facet |
De Corte, D. Lekunberri, I. Sintes, E. Garcia, J.A.L. Gonzalez, S. Herndl, G.J. |
author_sort |
De Corte, D. |
title |
Linkage between copepods and bacteria in the North Atlantic Ocean |
title_short |
Linkage between copepods and bacteria in the North Atlantic Ocean |
title_full |
Linkage between copepods and bacteria in the North Atlantic Ocean |
title_fullStr |
Linkage between copepods and bacteria in the North Atlantic Ocean |
title_full_unstemmed |
Linkage between copepods and bacteria in the North Atlantic Ocean |
title_sort |
linkage between copepods and bacteria in the north atlantic ocean |
publishDate |
2014 |
url |
https://www.vliz.be/imisdocs/publications/79/264079.pdf |
genre |
North Atlantic Copepods |
genre_facet |
North Atlantic Copepods |
op_source |
%3Ci%3EAquat.+Microb.+Ecol.+72%3C%2Fi%3E%3A+215-225.+%3Ca+href%3D%22http%3A%2F%2Fdx.doi.org%2F10.3354%2Fame01696%22+target%3D%22_blank%22%3Ehttp%3A%2F%2Fdx.doi.org%2F10.3354%2Fame01696%3C%2Fa%3E |
op_relation |
info:eu-repo/semantics/altIdentifier/wos/000340220300003 info:eu-repo/semantics/altIdentifier/doi/oi.org/10.3354/ame01696 https://www.vliz.be/imisdocs/publications/79/264079.pdf |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.3354/ame01696 |
container_title |
Aquatic Microbial Ecology |
container_volume |
72 |
container_issue |
3 |
container_start_page |
215 |
op_container_end_page |
225 |
_version_ |
1766131918139555840 |