Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory

An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral (Lophelia pertusa) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing chan...

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Published in:Scientific Reports
Main Authors: Osterloff, Jonas, Nilssen, Ingunn, Järnegren, Johanna, Van Engeland, Tom, Buhl-Mortensen, Pål, Nattkemper, Tim W.
Format: Text
Language:English
Published: 2019
Subjects:
Online Access:http://hdl.handle.net/11250/2596589
https://doi.org/10.1038/s41598-019-41275-1
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spelling ftninstnf:oai:brage.nina.no:11250/2596589 2023-05-15T17:08:15+02:00 Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory Osterloff, Jonas Nilssen, Ingunn Järnegren, Johanna Van Engeland, Tom Buhl-Mortensen, Pål Nattkemper, Tim W. Noreg, Norge, Norway, Nordland, Vesterålen, Lofoten 2019 application/pdf http://hdl.handle.net/11250/2596589 https://doi.org/10.1038/s41598-019-41275-1 eng eng urn:issn:2045-2322 http://hdl.handle.net/11250/2596589 https://doi.org/10.1038/s41598-019-41275-1 cristin:1695358 Navngivelse 4.0 Internasjonal http://creativecommons.org/licenses/by/4.0/deed.no © The Author(s) 2019 CC-BY 12 9 Scientific Reports VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 Peer reviewed 2019 ftninstnf https://doi.org/10.1038/s41598-019-41275-1 2021-12-23T07:17:02Z An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral (Lophelia pertusa) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing changes in coral colour and polyp activity (feeding). The image data was analysed together with data from the other sensors from the same period, to provide new insights into the short- and long-term dynamics in polyp features. The results indicate that diurnal variations and tidal current influenced polyp activity, by controlling the food supply. On a longer time-scale, the coral’s tissue colour changed from white in the spring to slightly red during the summer months, which can be explained by a seasonal change in food supply. Our work shows, that using an effective integrative computational approach, the image time series is a new and rich source of information to understand and monitor the dynamics in underwater environments due to the high temporal resolution and coverage enabled with FUOs. Text Lofoten Lophelia pertusa Nordland Nordland Vesterålen Nordland Norwegian Institute for Nature Research: Brage NINA Lofoten Norway Vesterålen ENVELOPE(14.939,14.939,68.754,68.754) Scientific Reports 9 1
institution Open Polar
collection Norwegian Institute for Nature Research: Brage NINA
op_collection_id ftninstnf
language English
topic VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497
spellingShingle VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497
Osterloff, Jonas
Nilssen, Ingunn
Järnegren, Johanna
Van Engeland, Tom
Buhl-Mortensen, Pål
Nattkemper, Tim W.
Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
topic_facet VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497
description An array of sensors, including an HD camera mounted on a Fixed Underwater Observatory (FUO) were used to monitor a cold-water coral (Lophelia pertusa) reef in the Lofoten-Vesterålen area from April to November 2015. Image processing and deep learning enabled extraction of time series describing changes in coral colour and polyp activity (feeding). The image data was analysed together with data from the other sensors from the same period, to provide new insights into the short- and long-term dynamics in polyp features. The results indicate that diurnal variations and tidal current influenced polyp activity, by controlling the food supply. On a longer time-scale, the coral’s tissue colour changed from white in the spring to slightly red during the summer months, which can be explained by a seasonal change in food supply. Our work shows, that using an effective integrative computational approach, the image time series is a new and rich source of information to understand and monitor the dynamics in underwater environments due to the high temporal resolution and coverage enabled with FUOs.
format Text
author Osterloff, Jonas
Nilssen, Ingunn
Järnegren, Johanna
Van Engeland, Tom
Buhl-Mortensen, Pål
Nattkemper, Tim W.
author_facet Osterloff, Jonas
Nilssen, Ingunn
Järnegren, Johanna
Van Engeland, Tom
Buhl-Mortensen, Pål
Nattkemper, Tim W.
author_sort Osterloff, Jonas
title Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_short Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_full Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_fullStr Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_full_unstemmed Computer vision enables short- and long-term analysis of Lophelia pertusa polyp behaviour and colour from an underwater observatory
title_sort computer vision enables short- and long-term analysis of lophelia pertusa polyp behaviour and colour from an underwater observatory
publishDate 2019
url http://hdl.handle.net/11250/2596589
https://doi.org/10.1038/s41598-019-41275-1
op_coverage Noreg, Norge, Norway, Nordland, Vesterålen, Lofoten
long_lat ENVELOPE(14.939,14.939,68.754,68.754)
geographic Lofoten
Norway
Vesterålen
geographic_facet Lofoten
Norway
Vesterålen
genre Lofoten
Lophelia pertusa
Nordland
Nordland
Vesterålen
Nordland
genre_facet Lofoten
Lophelia pertusa
Nordland
Nordland
Vesterålen
Nordland
op_source 12
9
Scientific Reports
op_relation urn:issn:2045-2322
http://hdl.handle.net/11250/2596589
https://doi.org/10.1038/s41598-019-41275-1
cristin:1695358
op_rights Navngivelse 4.0 Internasjonal
http://creativecommons.org/licenses/by/4.0/deed.no
© The Author(s) 2019
op_rightsnorm CC-BY
op_doi https://doi.org/10.1038/s41598-019-41275-1
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