Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice

Antarctica contains most of the glacial ice on the planet, a habitat that is largely unexplored by biologists. Recent warming in parts of Antarctica, particularly the Antarctic Peninsula region, is leading to widespread glacial retreat, releasing melt water and, potentially, contained biological mat...

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Published in:Anais da Academia Brasileira de Ciências
Main Authors: Câmara, Paulo E.A.S., Menezes, Graciele C.A., Pinto, Otavio H.B., Silva, Micheline C., Convey, Peter, Rosa, Luiz H.
Format: Article in Journal/Newspaper
Language:English
Published: Academia Brasileira de Ciências 2022
Subjects:
Online Access:http://nora.nerc.ac.uk/id/eprint/528896/
https://nora.nerc.ac.uk/id/eprint/528896/1/Camara.pdf
https://www.scielo.br/j/aabc/a/r8JDLqBC5LBkXfX5j8JQJHr/?format=pdf&lang=en
id ftnerc:oai:nora.nerc.ac.uk:528896
record_format openpolar
spelling ftnerc:oai:nora.nerc.ac.uk:528896 2023-05-15T13:41:45+02:00 Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice Câmara, Paulo E.A.S. Menezes, Graciele C.A. Pinto, Otavio H.B. Silva, Micheline C. Convey, Peter Rosa, Luiz H. 2022-02-28 text http://nora.nerc.ac.uk/id/eprint/528896/ https://nora.nerc.ac.uk/id/eprint/528896/1/Camara.pdf https://www.scielo.br/j/aabc/a/r8JDLqBC5LBkXfX5j8JQJHr/?format=pdf&lang=en en eng Academia Brasileira de Ciências https://nora.nerc.ac.uk/id/eprint/528896/1/Camara.pdf Câmara, Paulo E.A.S.; Menezes, Graciele C.A.; Pinto, Otavio H.B.; Silva, Micheline C.; Convey, Peter orcid:0000-0001-8497-9903 Rosa, Luiz H. 2022 Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice. Anais da Academia Brasileira de Ciências, 94, supplement 1. https://doi.org/10.1590/0001-3765202220201736 <https://doi.org/10.1590/0001-3765202220201736> cc_by_4 CC-BY Botany Publication - Article PeerReviewed 2022 ftnerc https://doi.org/10.1590/0001-3765202220201736 2023-02-04T19:51:18Z Antarctica contains most of the glacial ice on the planet, a habitat that is largely unexplored by biologists. Recent warming in parts of Antarctica, particularly the Antarctic Peninsula region, is leading to widespread glacial retreat, releasing melt water and, potentially, contained biological material and propagules. In this study, we used a DNA metabarcoding approach to characterize Viridiplantae DNA present in Antarctic glacial ice. Ice samples from six glaciers in the South Shetland Islands and Antarctic Peninsula were analysed, detecting the presence of DNA representing a total of 16 taxa including 11 Chlorophyta (green algae) and five Magnoliophyta (flowering plants). The green algae may indicate the presence of a viable algal community in the ice or simply of preserved DNA, and the sequence diversity assigned included representatives of Chlorophyta not previously recorded in Antarctica. The presence of flowering plant DNA is most likely to be associated with pollen or tissue fragments introduced by humans. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Antarctica South Shetland Islands Natural Environment Research Council: NERC Open Research Archive Antarctic The Antarctic Antarctic Peninsula South Shetland Islands Anais da Academia Brasileira de Ciências 94 suppl 1
institution Open Polar
collection Natural Environment Research Council: NERC Open Research Archive
op_collection_id ftnerc
language English
topic Botany
spellingShingle Botany
Câmara, Paulo E.A.S.
Menezes, Graciele C.A.
Pinto, Otavio H.B.
Silva, Micheline C.
Convey, Peter
Rosa, Luiz H.
Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice
topic_facet Botany
description Antarctica contains most of the glacial ice on the planet, a habitat that is largely unexplored by biologists. Recent warming in parts of Antarctica, particularly the Antarctic Peninsula region, is leading to widespread glacial retreat, releasing melt water and, potentially, contained biological material and propagules. In this study, we used a DNA metabarcoding approach to characterize Viridiplantae DNA present in Antarctic glacial ice. Ice samples from six glaciers in the South Shetland Islands and Antarctic Peninsula were analysed, detecting the presence of DNA representing a total of 16 taxa including 11 Chlorophyta (green algae) and five Magnoliophyta (flowering plants). The green algae may indicate the presence of a viable algal community in the ice or simply of preserved DNA, and the sequence diversity assigned included representatives of Chlorophyta not previously recorded in Antarctica. The presence of flowering plant DNA is most likely to be associated with pollen or tissue fragments introduced by humans.
format Article in Journal/Newspaper
author Câmara, Paulo E.A.S.
Menezes, Graciele C.A.
Pinto, Otavio H.B.
Silva, Micheline C.
Convey, Peter
Rosa, Luiz H.
author_facet Câmara, Paulo E.A.S.
Menezes, Graciele C.A.
Pinto, Otavio H.B.
Silva, Micheline C.
Convey, Peter
Rosa, Luiz H.
author_sort Câmara, Paulo E.A.S.
title Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice
title_short Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice
title_full Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice
title_fullStr Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice
title_full_unstemmed Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice
title_sort using metabarcoding to assess viridiplantae sequence diversity present in antarctic glacial ice
publisher Academia Brasileira de Ciências
publishDate 2022
url http://nora.nerc.ac.uk/id/eprint/528896/
https://nora.nerc.ac.uk/id/eprint/528896/1/Camara.pdf
https://www.scielo.br/j/aabc/a/r8JDLqBC5LBkXfX5j8JQJHr/?format=pdf&lang=en
geographic Antarctic
The Antarctic
Antarctic Peninsula
South Shetland Islands
geographic_facet Antarctic
The Antarctic
Antarctic Peninsula
South Shetland Islands
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
South Shetland Islands
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
South Shetland Islands
op_relation https://nora.nerc.ac.uk/id/eprint/528896/1/Camara.pdf
Câmara, Paulo E.A.S.; Menezes, Graciele C.A.; Pinto, Otavio H.B.; Silva, Micheline C.; Convey, Peter orcid:0000-0001-8497-9903
Rosa, Luiz H. 2022 Using metabarcoding to assess Viridiplantae sequence diversity present in Antarctic glacial ice. Anais da Academia Brasileira de Ciências, 94, supplement 1. https://doi.org/10.1590/0001-3765202220201736 <https://doi.org/10.1590/0001-3765202220201736>
op_rights cc_by_4
op_rightsnorm CC-BY
op_doi https://doi.org/10.1590/0001-3765202220201736
container_title Anais da Academia Brasileira de Ciências
container_volume 94
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