Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach

Assessment of the diversity of algal assemblages in Antarctica has until now largely relied on traditional microbiological culture approaches. Here we used DNA metabarcoding through high-throughput sequencing (HTS) to assess the uncultured algal diversity at two sites on Deception Island, Antarctica...

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Published in:Microbial Ecology
Main Authors: Câmara, Paulo E.A.S., Carvalho-Silva, Micheline, Pinto, Otávio H.B., Henriques, Diego Knop, da Silva, Thamar Holanda, Stech, Michael, Pellizzari, Franciane, Convey, Peter, Rosa, Luiz Henrique
Format: Article in Journal/Newspaper
Language:unknown
Published: Springer 2021
Subjects:
Online Access:http://nora.nerc.ac.uk/id/eprint/527057/
https://link.springer.com/article/10.1007/s00248-020-01584-9
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spelling ftnerc:oai:nora.nerc.ac.uk:527057 2023-05-15T13:41:45+02:00 Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach Câmara, Paulo E.A.S. Carvalho-Silva, Micheline Pinto, Otávio H.B. Henriques, Diego Knop da Silva, Thamar Holanda Stech, Michael Pellizzari, Franciane Convey, Peter Rosa, Luiz Henrique 2021-02 http://nora.nerc.ac.uk/id/eprint/527057/ https://link.springer.com/article/10.1007/s00248-020-01584-9 unknown Springer Câmara, Paulo E.A.S.; Carvalho-Silva, Micheline; Pinto, Otávio H.B.; Henriques, Diego Knop; da Silva, Thamar Holanda; Stech, Michael; Pellizzari, Franciane; Convey, Peter orcid:0000-0001-8497-9903 Rosa, Luiz Henrique. 2021 Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach. Microbial Ecology, 81. 323-334. https://doi.org/10.1007/s00248-020-01584-9 <https://doi.org/10.1007/s00248-020-01584-9> Ecology and Environment Botany Publication - Article PeerReviewed 2021 ftnerc https://doi.org/10.1007/s00248-020-01584-9 2023-02-04T19:50:16Z Assessment of the diversity of algal assemblages in Antarctica has until now largely relied on traditional microbiological culture approaches. Here we used DNA metabarcoding through high-throughput sequencing (HTS) to assess the uncultured algal diversity at two sites on Deception Island, Antarctica. The first was a relatively undisturbed site within an Antarctic Specially Protected Area (ASPA 140), and the second was a site heavily impacted by human visitation, the Whalers Bay historic site. We detected 65 distinct algal taxa, 50 from within ASPA 140 and 61 from Whalers Bay. Of these taxa, 46 were common to both sites, and 19 only occurred at one site. Algal richness was about six times greater than reported in previous studies using culture methods. A high proportion of DNA reads obtained was assigned to the highly invasive species Caulerpa webbiana at Whalers Bay, and the potentially pathogenic genus Desmodesmus was found at both sites. Our data demonstrate that important differences exist between these two protected and human-impacted sites on Deception Island in terms of algal diversity, richness, and abundance. The South Shetland Islands have experienced considerable effects of climate change in recent decades, while warming through geothermal activity on Deception Island itself makes this island one of the most vulnerable to colonization by non-native species. The detection of DNA of non-native taxa highlights concerns about how human impacts, which take place primarily through tourism and national research operations, may influence future biological colonization processes in Antarctica. Article in Journal/Newspaper Antarc* Antarctic Antarctica Deception Island South Shetland Islands Natural Environment Research Council: NERC Open Research Archive Antarctic South Shetland Islands Deception Island ENVELOPE(-60.633,-60.633,-62.950,-62.950) Whalers Bay ENVELOPE(69.917,69.917,-49.100,-49.100) Microbial Ecology 81 2 323 334
institution Open Polar
collection Natural Environment Research Council: NERC Open Research Archive
op_collection_id ftnerc
language unknown
topic Ecology and Environment
Botany
spellingShingle Ecology and Environment
Botany
Câmara, Paulo E.A.S.
Carvalho-Silva, Micheline
Pinto, Otávio H.B.
Henriques, Diego Knop
da Silva, Thamar Holanda
Stech, Michael
Pellizzari, Franciane
Convey, Peter
Rosa, Luiz Henrique
Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach
topic_facet Ecology and Environment
Botany
description Assessment of the diversity of algal assemblages in Antarctica has until now largely relied on traditional microbiological culture approaches. Here we used DNA metabarcoding through high-throughput sequencing (HTS) to assess the uncultured algal diversity at two sites on Deception Island, Antarctica. The first was a relatively undisturbed site within an Antarctic Specially Protected Area (ASPA 140), and the second was a site heavily impacted by human visitation, the Whalers Bay historic site. We detected 65 distinct algal taxa, 50 from within ASPA 140 and 61 from Whalers Bay. Of these taxa, 46 were common to both sites, and 19 only occurred at one site. Algal richness was about six times greater than reported in previous studies using culture methods. A high proportion of DNA reads obtained was assigned to the highly invasive species Caulerpa webbiana at Whalers Bay, and the potentially pathogenic genus Desmodesmus was found at both sites. Our data demonstrate that important differences exist between these two protected and human-impacted sites on Deception Island in terms of algal diversity, richness, and abundance. The South Shetland Islands have experienced considerable effects of climate change in recent decades, while warming through geothermal activity on Deception Island itself makes this island one of the most vulnerable to colonization by non-native species. The detection of DNA of non-native taxa highlights concerns about how human impacts, which take place primarily through tourism and national research operations, may influence future biological colonization processes in Antarctica.
format Article in Journal/Newspaper
author Câmara, Paulo E.A.S.
Carvalho-Silva, Micheline
Pinto, Otávio H.B.
Henriques, Diego Knop
da Silva, Thamar Holanda
Stech, Michael
Pellizzari, Franciane
Convey, Peter
Rosa, Luiz Henrique
author_facet Câmara, Paulo E.A.S.
Carvalho-Silva, Micheline
Pinto, Otávio H.B.
Henriques, Diego Knop
da Silva, Thamar Holanda
Stech, Michael
Pellizzari, Franciane
Convey, Peter
Rosa, Luiz Henrique
author_sort Câmara, Paulo E.A.S.
title Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach
title_short Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach
title_full Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach
title_fullStr Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach
title_full_unstemmed Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach
title_sort diversity and ecology of chlorophyta (viridiplantae) assemblages in protected and non-protected sites in deception island (antarctica, south shetland islands) assessed using an ngs approach
publisher Springer
publishDate 2021
url http://nora.nerc.ac.uk/id/eprint/527057/
https://link.springer.com/article/10.1007/s00248-020-01584-9
long_lat ENVELOPE(-60.633,-60.633,-62.950,-62.950)
ENVELOPE(69.917,69.917,-49.100,-49.100)
geographic Antarctic
South Shetland Islands
Deception Island
Whalers Bay
geographic_facet Antarctic
South Shetland Islands
Deception Island
Whalers Bay
genre Antarc*
Antarctic
Antarctica
Deception Island
South Shetland Islands
genre_facet Antarc*
Antarctic
Antarctica
Deception Island
South Shetland Islands
op_relation Câmara, Paulo E.A.S.; Carvalho-Silva, Micheline; Pinto, Otávio H.B.; Henriques, Diego Knop; da Silva, Thamar Holanda; Stech, Michael; Pellizzari, Franciane; Convey, Peter orcid:0000-0001-8497-9903
Rosa, Luiz Henrique. 2021 Diversity and ecology of Chlorophyta (Viridiplantae) assemblages in protected and non-protected sites in Deception Island (Antarctica, South Shetland Islands) assessed using an NGS approach. Microbial Ecology, 81. 323-334. https://doi.org/10.1007/s00248-020-01584-9 <https://doi.org/10.1007/s00248-020-01584-9>
op_doi https://doi.org/10.1007/s00248-020-01584-9
container_title Microbial Ecology
container_volume 81
container_issue 2
container_start_page 323
op_container_end_page 334
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