Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica

Nematodes are one of the key organisms in the terrestrial ecosystems of Antarctica. Their exceptional cryptobiotic adaptations against freezing and desiccation stress have attracted significant research attention. However, even today, relatively little is known about the biology of nematodes across...

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Published in:Polar Biology
Main Authors: Kagoshima, Hiroshi, Maslen, Rolf, Kito, Kenji, Imura, Satoshi, Niki, Hironori, Convey, Peter
Format: Article in Journal/Newspaper
Language:unknown
Published: Springer 2019
Subjects:
Online Access:http://nora.nerc.ac.uk/id/eprint/519668/
https://doi.org/10.1007/s00300-019-02482-8
id ftnerc:oai:nora.nerc.ac.uk:519668
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spelling ftnerc:oai:nora.nerc.ac.uk:519668 2023-12-17T10:21:38+01:00 Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica Kagoshima, Hiroshi Maslen, Rolf Kito, Kenji Imura, Satoshi Niki, Hironori Convey, Peter 2019-05 http://nora.nerc.ac.uk/id/eprint/519668/ https://doi.org/10.1007/s00300-019-02482-8 unknown Springer Kagoshima, Hiroshi; Maslen, Rolf; Kito, Kenji; Imura, Satoshi; Niki, Hironori; Convey, Peter orcid:0000-0001-8497-9903 . 2019 Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica. Polar Biology, 42 (5). 877-887. https://doi.org/10.1007/s00300-019-02482-8 <https://doi.org/10.1007/s00300-019-02482-8> Publication - Article PeerReviewed 2019 ftnerc https://doi.org/10.1007/s00300-019-02482-8 2023-11-17T00:03:30Z Nematodes are one of the key organisms in the terrestrial ecosystems of Antarctica. Their exceptional cryptobiotic adaptations against freezing and desiccation stress have attracted significant research attention. However, even today, relatively little is known about the biology of nematodes across this continent, especially in terms of their biodiversity and distribution. To address such fundamental research areas, correct classification of Antarctic nematodes is a necessary underpinning. Until recently, morphological examination has been the only established method available, and this remains challenging even for experts. Advances in molecular biological techniques now provide a complementary approach to nematode classification, but as yet have largely not been applied to the Antarctic fauna. In this study we initiate development of cataloguing of Antarctic nematodes using both morphological and molecular information from individual worms. We collected nematode samples from islands in maritime Antarctica (Signy, Adelaide and Léonie Islands; a latitudinal range between the South Orkney Islands and Marguerite Bay), and classified them by DNA sequence obtained from morphologically-determined samples. We obtained small subunit ribosomal RNA gene (SSU rDNA) sequence data from seven major maritime Antarctic nematode species, which will permit future identification of these species without the requirement for detailed morphological taxonomic analyses. We also trialled the application of molecular analyses to morphologically unidentified samples from King George Island, thereby obtaining support for our approach through the identification of samples with identical sequences. This approach provides baseline information for future studies of Antarctic nematodes. Article in Journal/Newspaper Antarc* Antarctic Antarctica King George Island Léonie Islands Polar Biology South Orkney Islands Natural Environment Research Council: NERC Open Research Archive Antarctic The Antarctic King George Island South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) Marguerite ENVELOPE(141.378,141.378,-66.787,-66.787) Marguerite Bay ENVELOPE(-68.000,-68.000,-68.500,-68.500) Léonie ENVELOPE(-68.350,-68.350,-67.600,-67.600) Léonie Islands ENVELOPE(-68.350,-68.350,-67.600,-67.600) Polar Biology 42 5 877 887
institution Open Polar
collection Natural Environment Research Council: NERC Open Research Archive
op_collection_id ftnerc
language unknown
description Nematodes are one of the key organisms in the terrestrial ecosystems of Antarctica. Their exceptional cryptobiotic adaptations against freezing and desiccation stress have attracted significant research attention. However, even today, relatively little is known about the biology of nematodes across this continent, especially in terms of their biodiversity and distribution. To address such fundamental research areas, correct classification of Antarctic nematodes is a necessary underpinning. Until recently, morphological examination has been the only established method available, and this remains challenging even for experts. Advances in molecular biological techniques now provide a complementary approach to nematode classification, but as yet have largely not been applied to the Antarctic fauna. In this study we initiate development of cataloguing of Antarctic nematodes using both morphological and molecular information from individual worms. We collected nematode samples from islands in maritime Antarctica (Signy, Adelaide and Léonie Islands; a latitudinal range between the South Orkney Islands and Marguerite Bay), and classified them by DNA sequence obtained from morphologically-determined samples. We obtained small subunit ribosomal RNA gene (SSU rDNA) sequence data from seven major maritime Antarctic nematode species, which will permit future identification of these species without the requirement for detailed morphological taxonomic analyses. We also trialled the application of molecular analyses to morphologically unidentified samples from King George Island, thereby obtaining support for our approach through the identification of samples with identical sequences. This approach provides baseline information for future studies of Antarctic nematodes.
format Article in Journal/Newspaper
author Kagoshima, Hiroshi
Maslen, Rolf
Kito, Kenji
Imura, Satoshi
Niki, Hironori
Convey, Peter
spellingShingle Kagoshima, Hiroshi
Maslen, Rolf
Kito, Kenji
Imura, Satoshi
Niki, Hironori
Convey, Peter
Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica
author_facet Kagoshima, Hiroshi
Maslen, Rolf
Kito, Kenji
Imura, Satoshi
Niki, Hironori
Convey, Peter
author_sort Kagoshima, Hiroshi
title Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica
title_short Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica
title_full Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica
title_fullStr Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica
title_full_unstemmed Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica
title_sort integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime antarctica
publisher Springer
publishDate 2019
url http://nora.nerc.ac.uk/id/eprint/519668/
https://doi.org/10.1007/s00300-019-02482-8
long_lat ENVELOPE(-45.500,-45.500,-60.583,-60.583)
ENVELOPE(141.378,141.378,-66.787,-66.787)
ENVELOPE(-68.000,-68.000,-68.500,-68.500)
ENVELOPE(-68.350,-68.350,-67.600,-67.600)
ENVELOPE(-68.350,-68.350,-67.600,-67.600)
geographic Antarctic
The Antarctic
King George Island
South Orkney Islands
Marguerite
Marguerite Bay
Léonie
Léonie Islands
geographic_facet Antarctic
The Antarctic
King George Island
South Orkney Islands
Marguerite
Marguerite Bay
Léonie
Léonie Islands
genre Antarc*
Antarctic
Antarctica
King George Island
Léonie Islands
Polar Biology
South Orkney Islands
genre_facet Antarc*
Antarctic
Antarctica
King George Island
Léonie Islands
Polar Biology
South Orkney Islands
op_relation Kagoshima, Hiroshi; Maslen, Rolf; Kito, Kenji; Imura, Satoshi; Niki, Hironori; Convey, Peter orcid:0000-0001-8497-9903 . 2019 Integrated taxonomy combining morphological and molecular biological analyses of soil nematodes from maritime Antarctica. Polar Biology, 42 (5). 877-887. https://doi.org/10.1007/s00300-019-02482-8 <https://doi.org/10.1007/s00300-019-02482-8>
op_doi https://doi.org/10.1007/s00300-019-02482-8
container_title Polar Biology
container_volume 42
container_issue 5
container_start_page 877
op_container_end_page 887
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