Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity

In this study, which was carried out within the ChEsSO consortium project (Chemosynthetically driven ecosystems south of the Polar Front), we sampled two hydrothermal vent sites on the East Scotia Ridge, Scotia Sea, one in the Kemp Caldera, South Sandwich Arc, and one in the Bransfield Strait, north...

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Published in:FEMS Microbiology Letters
Main Authors: Millard, Andrew D., Pearce, David A., Zwirglmaier, Katrin
Format: Article in Journal/Newspaper
Language:unknown
Published: Oxford University Press 2016
Subjects:
Online Access:http://nora.nerc.ac.uk/id/eprint/512114/
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spelling ftnerc:oai:nora.nerc.ac.uk:512114 2023-05-15T13:49:32+02:00 Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity Millard, Andrew D. Pearce, David A. Zwirglmaier, Katrin 2016-04 http://nora.nerc.ac.uk/id/eprint/512114/ unknown Oxford University Press Millard, Andrew D.; Pearce, David A. orcid:0000-0001-5292-4596 Zwirglmaier, Katrin. 2016 Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity. FEMS Microbiology Letters, 363 (7), fnw043. https://doi.org/10.1093/femsle/fnw043 <https://doi.org/10.1093/femsle/fnw043> Publication - Article PeerReviewed 2016 ftnerc https://doi.org/10.1093/femsle/fnw043 2023-02-04T19:42:16Z In this study, which was carried out within the ChEsSO consortium project (Chemosynthetically driven ecosystems south of the Polar Front), we sampled two hydrothermal vent sites on the East Scotia Ridge, Scotia Sea, one in the Kemp Caldera, South Sandwich Arc, and one in the Bransfield Strait, north-west of the Antarctic Peninsula, which exhibit strong differences in their chemical characteristics. We compared a subset of their bacteriophage population by Sanger- and 454-sequencing of g23, which codes for the major capsid protein of T4likeviruses. We found that the sites differ vastly in their bacteriophage diversity, which reflects the differences in the chemical conditions and therefore putatively the differences in microbial hosts living at these sites. Comparing phage diversity in the vent samples to other aquatic samples, the vent samples formed a distinct separate cluster, which also included the non-vent control samples that were taken several hundred meters above the vent chimneys. This indicates that the influence of the vents on the microbial population and therefore also the bacteriophage population extends much further than anticipated. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Bransfield Strait Scotia Sea Natural Environment Research Council: NERC Open Research Archive Antarctic The Antarctic Antarctic Peninsula Scotia Sea Bransfield Strait East Scotia Ridge ENVELOPE(-29.250,-29.250,-57.917,-57.917) FEMS Microbiology Letters 363 7 fnw043
institution Open Polar
collection Natural Environment Research Council: NERC Open Research Archive
op_collection_id ftnerc
language unknown
description In this study, which was carried out within the ChEsSO consortium project (Chemosynthetically driven ecosystems south of the Polar Front), we sampled two hydrothermal vent sites on the East Scotia Ridge, Scotia Sea, one in the Kemp Caldera, South Sandwich Arc, and one in the Bransfield Strait, north-west of the Antarctic Peninsula, which exhibit strong differences in their chemical characteristics. We compared a subset of their bacteriophage population by Sanger- and 454-sequencing of g23, which codes for the major capsid protein of T4likeviruses. We found that the sites differ vastly in their bacteriophage diversity, which reflects the differences in the chemical conditions and therefore putatively the differences in microbial hosts living at these sites. Comparing phage diversity in the vent samples to other aquatic samples, the vent samples formed a distinct separate cluster, which also included the non-vent control samples that were taken several hundred meters above the vent chimneys. This indicates that the influence of the vents on the microbial population and therefore also the bacteriophage population extends much further than anticipated.
format Article in Journal/Newspaper
author Millard, Andrew D.
Pearce, David A.
Zwirglmaier, Katrin
spellingShingle Millard, Andrew D.
Pearce, David A.
Zwirglmaier, Katrin
Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity
author_facet Millard, Andrew D.
Pearce, David A.
Zwirglmaier, Katrin
author_sort Millard, Andrew D.
title Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity
title_short Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity
title_full Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity
title_fullStr Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity
title_full_unstemmed Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity
title_sort biogeography of bacteriophages at four hydrothermal vent sites in the antarctic based on gp23 sequence diversity
publisher Oxford University Press
publishDate 2016
url http://nora.nerc.ac.uk/id/eprint/512114/
long_lat ENVELOPE(-29.250,-29.250,-57.917,-57.917)
geographic Antarctic
The Antarctic
Antarctic Peninsula
Scotia Sea
Bransfield Strait
East Scotia Ridge
geographic_facet Antarctic
The Antarctic
Antarctic Peninsula
Scotia Sea
Bransfield Strait
East Scotia Ridge
genre Antarc*
Antarctic
Antarctic Peninsula
Bransfield Strait
Scotia Sea
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Bransfield Strait
Scotia Sea
op_relation Millard, Andrew D.; Pearce, David A. orcid:0000-0001-5292-4596
Zwirglmaier, Katrin. 2016 Biogeography of bacteriophages at four hydrothermal vent sites in the Antarctic based on gp23 sequence diversity. FEMS Microbiology Letters, 363 (7), fnw043. https://doi.org/10.1093/femsle/fnw043 <https://doi.org/10.1093/femsle/fnw043>
op_doi https://doi.org/10.1093/femsle/fnw043
container_title FEMS Microbiology Letters
container_volume 363
container_issue 7
container_start_page fnw043
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