Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica

Since the advent of 16SrRNAgene-based molecular analysis, an increasing amount of work has been conducted on the Antarctic soilbacterial community. The majority of such studies suggest that the Antarctic soil environment may harbour a greater diversity of bacteria than was previously thought, and in...

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Published in:Geoderma
Main Authors: Chong, C.W., Pearce, David, Convey, Peter, Yew, W.C., Tan, I.K.P.
Format: Article in Journal/Newspaper
Language:unknown
Published: Elsevier 2012
Subjects:
Online Access:http://nora.nerc.ac.uk/id/eprint/18237/
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spelling ftnerc:oai:nora.nerc.ac.uk:18237 2024-02-11T09:57:48+01:00 Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica Chong, C.W. Pearce, David Convey, Peter Yew, W.C. Tan, I.K.P. 2012 http://nora.nerc.ac.uk/id/eprint/18237/ unknown Elsevier Chong, C.W.; Pearce, David orcid:0000-0001-5292-4596 Convey, Peter orcid:0000-0001-8497-9903 Yew, W.C.; Tan, I.K.P. 2012 Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica. Geoderma, 181-182. 45-55. https://doi.org/10.1016/j.geoderma.2012.02.017 <https://doi.org/10.1016/j.geoderma.2012.02.017> Publication - Article PeerReviewed 2012 ftnerc https://doi.org/10.1016/j.geoderma.2012.02.017 2024-01-26T00:03:20Z Since the advent of 16SrRNAgene-based molecular analysis, an increasing amount of work has been conducted on the Antarctic soilbacterial community. The majority of such studies suggest that the Antarctic soil environment may harbour a greater diversity of bacteria than was previously thought, and indeed that a proportion of the bacterial species found might be unique to the Antarctic. However, few have looked at the distribution of soilsequence types from different biogeographic regions of the continent. Here, we assess the taxonomic distribution of soil bacteria from differentregions and latitudes in Antarctica by integrating 16SrRNAgenesequence information from 13 independent studies that, together, obtained samples from 35 locations ranging from 51°S to 78°S. The majority of these formed a transect across the continent, representing most of the ice-free regions of the Antarctic Peninsula and Scott Sector. Using detailed phylogenetic analysis, we found that most of the Antarctic soil environments contained a narrow range of bacterial species when compared to the overall number of sequences available. Further, patterns in the taxonomic distribution of Antarctic soilbacterial communities were significantly correlated to both the underlying soil parameters and geographic (regional) origins. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula Antarctica Natural Environment Research Council: NERC Open Research Archive Antarctic Antarctic Peninsula The Antarctic Geoderma 181-182 45 55
institution Open Polar
collection Natural Environment Research Council: NERC Open Research Archive
op_collection_id ftnerc
language unknown
description Since the advent of 16SrRNAgene-based molecular analysis, an increasing amount of work has been conducted on the Antarctic soilbacterial community. The majority of such studies suggest that the Antarctic soil environment may harbour a greater diversity of bacteria than was previously thought, and indeed that a proportion of the bacterial species found might be unique to the Antarctic. However, few have looked at the distribution of soilsequence types from different biogeographic regions of the continent. Here, we assess the taxonomic distribution of soil bacteria from differentregions and latitudes in Antarctica by integrating 16SrRNAgenesequence information from 13 independent studies that, together, obtained samples from 35 locations ranging from 51°S to 78°S. The majority of these formed a transect across the continent, representing most of the ice-free regions of the Antarctic Peninsula and Scott Sector. Using detailed phylogenetic analysis, we found that most of the Antarctic soil environments contained a narrow range of bacterial species when compared to the overall number of sequences available. Further, patterns in the taxonomic distribution of Antarctic soilbacterial communities were significantly correlated to both the underlying soil parameters and geographic (regional) origins.
format Article in Journal/Newspaper
author Chong, C.W.
Pearce, David
Convey, Peter
Yew, W.C.
Tan, I.K.P.
spellingShingle Chong, C.W.
Pearce, David
Convey, Peter
Yew, W.C.
Tan, I.K.P.
Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica
author_facet Chong, C.W.
Pearce, David
Convey, Peter
Yew, W.C.
Tan, I.K.P.
author_sort Chong, C.W.
title Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica
title_short Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica
title_full Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica
title_fullStr Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica
title_full_unstemmed Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica
title_sort patterns in the distribution of soil bacterial 16s rrna gene sequences from different regions of antarctica
publisher Elsevier
publishDate 2012
url http://nora.nerc.ac.uk/id/eprint/18237/
geographic Antarctic
Antarctic Peninsula
The Antarctic
geographic_facet Antarctic
Antarctic Peninsula
The Antarctic
genre Antarc*
Antarctic
Antarctic Peninsula
Antarctica
genre_facet Antarc*
Antarctic
Antarctic Peninsula
Antarctica
op_relation Chong, C.W.; Pearce, David orcid:0000-0001-5292-4596
Convey, Peter orcid:0000-0001-8497-9903
Yew, W.C.; Tan, I.K.P. 2012 Patterns in the distribution of soil bacterial 16S rRNA gene sequences from different regions of Antarctica. Geoderma, 181-182. 45-55. https://doi.org/10.1016/j.geoderma.2012.02.017 <https://doi.org/10.1016/j.geoderma.2012.02.017>
op_doi https://doi.org/10.1016/j.geoderma.2012.02.017
container_title Geoderma
container_volume 181-182
container_start_page 45
op_container_end_page 55
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