Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic

Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asia...

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Published in:Cell Reports
Main Authors: Lynch, Vincent J., Bedoya-Reina, Oscar C., Ratan, Aakrosh, Sulak, Michael, Drautz-Moses, Daniela I., Perry, George H., Miller, Webb, Schuster, Stephan C.
Other Authors: Singapore Centre for Environmental Life Sciences Engineering
Format: Article in Journal/Newspaper
Language:English
Published: 2015
Subjects:
Online Access:https://hdl.handle.net/10356/103508
http://hdl.handle.net/10220/38768
https://doi.org/10.1016/j.celrep.2015.06.027
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spelling ftnanyangtu:oai:dr.ntu.edu.sg:10356/103508 2023-05-15T14:25:49+02:00 Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic Lynch, Vincent J. Bedoya-Reina, Oscar C. Ratan, Aakrosh Sulak, Michael Drautz-Moses, Daniela I. Perry, George H. Miller, Webb Schuster, Stephan C. Singapore Centre for Environmental Life Sciences Engineering 2015-10-01T07:32:01Z application/pdf https://hdl.handle.net/10356/103508 http://hdl.handle.net/10220/38768 https://doi.org/10.1016/j.celrep.2015.06.027 en eng Cell Reports Lynch, V., Bedoya-Reina, O., Ratan, A., Sulak, M., Drautz-Moses, D., et al. (2015). Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic. Cell Reports, 12(2), 217-228. 2211-1247 https://hdl.handle.net/10356/103508 http://hdl.handle.net/10220/38768 doi:10.1016/j.celrep.2015.06.027 © 2015 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). CC-BY-NC-ND Journal Article 2015 ftnanyangtu https://doi.org/10.1016/j.celrep.2015.06.027 2020-09-25T00:08:47Z Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asian elephants and two woolly mammoths, and we identified and functionally annotated genetic changes unique to woolly mammoths. We found that genes with mammoth-specific amino acid changes are enriched in functions related to circadian biology, skin and hair development and physiology, lipid metabolism, adipose development and physiology, and temperature sensation. Finally, we resurrected and functionally tested the mammoth and ancestral elephant TRPV3 gene, which encodes a temperature-sensitive transient receptor potential (thermoTRP) channel involved in thermal sensation and hair growth, and we show that a single mammoth-specific amino acid substitution in an otherwise highly conserved region of the TRPV3 channel strongly affects its temperature sensitivity. Published version Article in Journal/Newspaper Arctic Arctic DR-NTU (Digital Repository at Nanyang Technological University, Singapore) Arctic Cell Reports 12 2 217 228
institution Open Polar
collection DR-NTU (Digital Repository at Nanyang Technological University, Singapore)
op_collection_id ftnanyangtu
language English
description Woolly mammoths and living elephants are characterized by major phenotypic differences that have allowed them to live in very different environments. To identify the genetic changes that underlie the suite of woolly mammoth adaptations to extreme cold, we sequenced the nuclear genome from three Asian elephants and two woolly mammoths, and we identified and functionally annotated genetic changes unique to woolly mammoths. We found that genes with mammoth-specific amino acid changes are enriched in functions related to circadian biology, skin and hair development and physiology, lipid metabolism, adipose development and physiology, and temperature sensation. Finally, we resurrected and functionally tested the mammoth and ancestral elephant TRPV3 gene, which encodes a temperature-sensitive transient receptor potential (thermoTRP) channel involved in thermal sensation and hair growth, and we show that a single mammoth-specific amino acid substitution in an otherwise highly conserved region of the TRPV3 channel strongly affects its temperature sensitivity. Published version
author2 Singapore Centre for Environmental Life Sciences Engineering
format Article in Journal/Newspaper
author Lynch, Vincent J.
Bedoya-Reina, Oscar C.
Ratan, Aakrosh
Sulak, Michael
Drautz-Moses, Daniela I.
Perry, George H.
Miller, Webb
Schuster, Stephan C.
spellingShingle Lynch, Vincent J.
Bedoya-Reina, Oscar C.
Ratan, Aakrosh
Sulak, Michael
Drautz-Moses, Daniela I.
Perry, George H.
Miller, Webb
Schuster, Stephan C.
Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
author_facet Lynch, Vincent J.
Bedoya-Reina, Oscar C.
Ratan, Aakrosh
Sulak, Michael
Drautz-Moses, Daniela I.
Perry, George H.
Miller, Webb
Schuster, Stephan C.
author_sort Lynch, Vincent J.
title Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_short Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_full Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_fullStr Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_full_unstemmed Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic
title_sort elephantid genomes reveal the molecular bases of woolly mammoth adaptations to the arctic
publishDate 2015
url https://hdl.handle.net/10356/103508
http://hdl.handle.net/10220/38768
https://doi.org/10.1016/j.celrep.2015.06.027
geographic Arctic
geographic_facet Arctic
genre Arctic
Arctic
genre_facet Arctic
Arctic
op_relation Cell Reports
Lynch, V., Bedoya-Reina, O., Ratan, A., Sulak, M., Drautz-Moses, D., et al. (2015). Elephantid Genomes Reveal the Molecular Bases of Woolly Mammoth Adaptations to the Arctic. Cell Reports, 12(2), 217-228.
2211-1247
https://hdl.handle.net/10356/103508
http://hdl.handle.net/10220/38768
doi:10.1016/j.celrep.2015.06.027
op_rights © 2015 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
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op_doi https://doi.org/10.1016/j.celrep.2015.06.027
container_title Cell Reports
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container_start_page 217
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