DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.
15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC)...
Published in: | Polar Science |
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Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Other Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2011
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Subjects: | |
Online Access: | https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 |
id |
ftmuseumnhn:oai:HAL:hal-00614982v1 |
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openpolar |
institution |
Open Polar |
collection |
Muséum National d'Histoire Naturelle (MNHM): HAL |
op_collection_id |
ftmuseumnhn |
language |
English |
topic |
Barcode Cytochrome oxidase 1 CEAMARC Taxonomy Systematics [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy |
spellingShingle |
Barcode Cytochrome oxidase 1 CEAMARC Taxonomy Systematics [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
topic_facet |
Barcode Cytochrome oxidase 1 CEAMARC Taxonomy Systematics [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy |
description |
15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007e2008. The Australian vessel RSVAurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. |
author2 |
Systématique, adaptation, évolution (SAE) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Canadian Centre for DNA Barcoding University of Guelph Martin Ryan Marine Science Institute National University of Ireland Galway (NUI Galway) School of Biological Sciences Queen's University Belfast (QUB) Natural Environments Program Queensland Museum British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Diversité, évolution et écologie fonctionnelle marine (DIMAR) Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS) Genoscope - Centre national de séquençage Evry (GENOSCOPE) Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biogéosciences UMR 6282 (BGS) Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS) Mer, molécules et santé EA 2160 (MMS) Le Mans Université (UM)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST) Université de Nantes (UN)-Université de Nantes (UN)-Université de Nantes - UFR des Sciences Pharmaceutiques et Biologiques Université de Nantes (UN)-Université de Nantes (UN) Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA) Instituto de Ecología y Biodiversidad Biologie des organismes marins et écosystèmes (BOME) Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Scott Polar Research Institute University of Cambridge UK (CAM) Functional Ecology Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung = Alfred Wegener Institute for Polar and Marine Research = Institut Alfred-Wegener pour la recherche polaire et marine (AWI) Helmholtz-Gemeinschaft = Helmholtz Association-Helmholtz-Gemeinschaft = Helmholtz Association Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy The Natural History Museum London (NHM) Institute of Oceanology Polska Akademia Nauk = Polish Academy of Sciences = Académie polonaise des sciences (PAN) Department of Invertebrate Zoology Smithsonian Institution-National Museum of Natural History Museum Victoria Museum Victoria Melbourne Biologie 1 Universität Regensburg (UR) National Institute of Water and Atmospheric Research Wellington (NIWA) Department of Zoology |
format |
Article in Journal/Newspaper |
author |
Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia |
author_facet |
Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia |
author_sort |
Dettaï, Agnès |
title |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_short |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_full |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_fullStr |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_full_unstemmed |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. |
title_sort |
dna barcoding and molecular systematics of the benthic and demersal organisms of the ceamarc survey. |
publisher |
HAL CCSD |
publishDate |
2011 |
url |
https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 |
long_lat |
ENVELOPE(140.017,140.017,-66.667,-66.667) ENVELOPE(140.013,140.013,-66.667,-66.667) ENVELOPE(140.000,140.000,-65.000,-65.000) |
geographic |
Antarctic Southern Ocean The Antarctic Antarctic Peninsula Austral Ross Sea Dumont d'Urville Dumont-d'Urville D'Urville Sea |
geographic_facet |
Antarctic Southern Ocean The Antarctic Antarctic Peninsula Austral Ross Sea Dumont d'Urville Dumont-d'Urville D'Urville Sea |
genre |
Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean |
op_source |
ISSN: 1873-9652 Polar Science https://hal.science/hal-00614982 Polar Science, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.polar.2011.02.002 hal-00614982 https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf doi:10.1016/j.polar.2011.02.002 |
op_rights |
info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.1016/j.polar.2011.02.002 |
container_title |
Polar Science |
container_volume |
5 |
container_issue |
2 |
container_start_page |
298 |
op_container_end_page |
312 |
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1796318670531592192 |
spelling |
ftmuseumnhn:oai:HAL:hal-00614982v1 2024-04-14T08:02:55+00:00 DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Dettaï, Agnès Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gaël Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, Katarzyna Wadley, Victoria Améziane, Nadia Systématique, adaptation, évolution (SAE) Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Canadian Centre for DNA Barcoding University of Guelph Martin Ryan Marine Science Institute National University of Ireland Galway (NUI Galway) School of Biological Sciences Queen's University Belfast (QUB) Natural Environments Program Queensland Museum British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Diversité, évolution et écologie fonctionnelle marine (DIMAR) Université de la Méditerranée - Aix-Marseille 2-Centre National de la Recherche Scientifique (CNRS) Genoscope - Centre national de séquençage Evry (GENOSCOPE) Université Paris-Saclay-Direction de Recherche Fondamentale (CEA) (DRF (CEA)) Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA) Biogéosciences UMR 6282 (BGS) Université de Bourgogne (UB)-Centre National de la Recherche Scientifique (CNRS) Mer, molécules et santé EA 2160 (MMS) Le Mans Université (UM)-Université de Nantes - UFR des Sciences et des Techniques (UN UFR ST) Université de Nantes (UN)-Université de Nantes (UN)-Université de Nantes - UFR des Sciences Pharmaceutiques et Biologiques Université de Nantes (UN)-Université de Nantes (UN) Biologie des Organismes et Ecosystèmes Aquatiques (BOREA) Université de Caen Normandie (UNICAEN) Normandie Université (NU)-Normandie Université (NU)-Muséum national d'Histoire naturelle (MNHN)-Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA) Instituto de Ecología y Biodiversidad Biologie des organismes marins et écosystèmes (BOME) Muséum national d'Histoire naturelle (MNHN)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS) Scott Polar Research Institute University of Cambridge UK (CAM) Functional Ecology Alfred-Wegener-Institut, Helmholtz-Zentrum für Polar- und Meeresforschung = Alfred Wegener Institute for Polar and Marine Research = Institut Alfred-Wegener pour la recherche polaire et marine (AWI) Helmholtz-Gemeinschaft = Helmholtz Association-Helmholtz-Gemeinschaft = Helmholtz Association Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy The Natural History Museum London (NHM) Institute of Oceanology Polska Akademia Nauk = Polish Academy of Sciences = Académie polonaise des sciences (PAN) Department of Invertebrate Zoology Smithsonian Institution-National Museum of Natural History Museum Victoria Museum Victoria Melbourne Biologie 1 Universität Regensburg (UR) National Institute of Water and Atmospheric Research Wellington (NIWA) Department of Zoology 2011-08 https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf https://doi.org/10.1016/j.polar.2011.02.002 en eng HAL CCSD Elsevier info:eu-repo/semantics/altIdentifier/doi/10.1016/j.polar.2011.02.002 hal-00614982 https://hal.science/hal-00614982 https://hal.science/hal-00614982/document https://hal.science/hal-00614982/file/2011_Dettai_Polar%20Science_pr_DNA%20Barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf doi:10.1016/j.polar.2011.02.002 info:eu-repo/semantics/OpenAccess ISSN: 1873-9652 Polar Science https://hal.science/hal-00614982 Polar Science, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩ Barcode Cytochrome oxidase 1 CEAMARC Taxonomy Systematics [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE] [SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy info:eu-repo/semantics/article Journal articles 2011 ftmuseumnhn https://doi.org/10.1016/j.polar.2011.02.002 2024-03-21T16:39:25Z 15 pages International audience The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007e2008. The Australian vessel RSVAurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean Muséum National d'Histoire Naturelle (MNHM): HAL Antarctic Southern Ocean The Antarctic Antarctic Peninsula Austral Ross Sea Dumont d'Urville ENVELOPE(140.017,140.017,-66.667,-66.667) Dumont-d'Urville ENVELOPE(140.013,140.013,-66.667,-66.667) D'Urville Sea ENVELOPE(140.000,140.000,-65.000,-65.000) Polar Science 5 2 298 312 |