Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication

Partial genome sequence of a herpes-like virus, isolated from Siberian sturgeon ( Acipenser baeri ), was determined and subjected to phylogenetic analysis. The virus (SbSHV) has been shown to be the causative agent of an acute disease with high mortality in farmed juvenile sturgeons in Russia. Two f...

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Published in:Acta Veterinaria Hungarica
Main Authors: Doszpoly, Andor, Shchelkunov, Igor
Format: Article in Journal/Newspaper
Language:unknown
Published: 2010
Subjects:
Online Access:http://real.mtak.hu/48097/
http://real.mtak.hu/48097/1/avet.58.2010.2.13.pdf
https://doi.org/10.1556/AVet.58.2010.2.13
id ftmtak:oai:real.mtak.hu:48097
record_format openpolar
spelling ftmtak:oai:real.mtak.hu:48097 2023-05-15T18:19:29+02:00 Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication Doszpoly, Andor Shchelkunov, Igor 2010 text http://real.mtak.hu/48097/ http://real.mtak.hu/48097/1/avet.58.2010.2.13.pdf https://doi.org/10.1556/AVet.58.2010.2.13 unknown http://real.mtak.hu/48097/1/avet.58.2010.2.13.pdf Doszpoly, Andor and Shchelkunov, Igor (2010) Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication. Acta Veterinaria Hungarica, 58 (2). pp. 269-274. ISSN 0236-6290 SV Veterinary science / állatorvostudomány Article PeerReviewed 2010 ftmtak https://doi.org/10.1556/AVet.58.2010.2.13 2017-02-15T23:54:47Z Partial genome sequence of a herpes-like virus, isolated from Siberian sturgeon ( Acipenser baeri ), was determined and subjected to phylogenetic analysis. The virus (SbSHV) has been shown to be the causative agent of an acute disease with high mortality in farmed juvenile sturgeons in Russia. Two fragments (of 7000 and 300 base pairs in length) encompassing 3 complete and 3 partial ORFs were amplified by PCR. Sturgeon herpesvirus strains, classified into species Acipenserid herpesvirus 2 (AciHV-2), have been isolated and partially sequenced from several regions (California, Idaho, Oregon and Canada) of North America from white ( A. transmontanus) and shortnose sturgeons ( A. brevirostrum ). The sequence of the SbSHV strain shared highest identity with that of the Canadian strain originating from shortnose sturgeon. The phylogenetic analysis also confirmed that SbSHV is closely related to AciHV-2 and could also be classified into this virus species. This is the first report on the occurrence of AciHV-2 in Europe. Previously, only another virus species, AciHV-1 has been detected in farmed white sturgeons in Italy. The size and position of ORFs in the examined gene block confirmed that this genomic region is highly conserved in members of the genus Ictalurivirus . Article in Journal/Newspaper Siberian sturgeon MTAK: REAL (Library and Information Centre of the Hungarian Academy of Sciences Canada Acta Veterinaria Hungarica 58 2 269 274
institution Open Polar
collection MTAK: REAL (Library and Information Centre of the Hungarian Academy of Sciences
op_collection_id ftmtak
language unknown
topic SV Veterinary science / állatorvostudomány
spellingShingle SV Veterinary science / állatorvostudomány
Doszpoly, Andor
Shchelkunov, Igor
Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication
topic_facet SV Veterinary science / állatorvostudomány
description Partial genome sequence of a herpes-like virus, isolated from Siberian sturgeon ( Acipenser baeri ), was determined and subjected to phylogenetic analysis. The virus (SbSHV) has been shown to be the causative agent of an acute disease with high mortality in farmed juvenile sturgeons in Russia. Two fragments (of 7000 and 300 base pairs in length) encompassing 3 complete and 3 partial ORFs were amplified by PCR. Sturgeon herpesvirus strains, classified into species Acipenserid herpesvirus 2 (AciHV-2), have been isolated and partially sequenced from several regions (California, Idaho, Oregon and Canada) of North America from white ( A. transmontanus) and shortnose sturgeons ( A. brevirostrum ). The sequence of the SbSHV strain shared highest identity with that of the Canadian strain originating from shortnose sturgeon. The phylogenetic analysis also confirmed that SbSHV is closely related to AciHV-2 and could also be classified into this virus species. This is the first report on the occurrence of AciHV-2 in Europe. Previously, only another virus species, AciHV-1 has been detected in farmed white sturgeons in Italy. The size and position of ORFs in the examined gene block confirmed that this genomic region is highly conserved in members of the genus Ictalurivirus .
format Article in Journal/Newspaper
author Doszpoly, Andor
Shchelkunov, Igor
author_facet Doszpoly, Andor
Shchelkunov, Igor
author_sort Doszpoly, Andor
title Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication
title_short Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication
title_full Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication
title_fullStr Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication
title_full_unstemmed Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication
title_sort partial genome analysis of siberian sturgeon alloherpesvirus suggests its close relation to acihv-2 — short communication
publishDate 2010
url http://real.mtak.hu/48097/
http://real.mtak.hu/48097/1/avet.58.2010.2.13.pdf
https://doi.org/10.1556/AVet.58.2010.2.13
geographic Canada
geographic_facet Canada
genre Siberian sturgeon
genre_facet Siberian sturgeon
op_relation http://real.mtak.hu/48097/1/avet.58.2010.2.13.pdf
Doszpoly, Andor and Shchelkunov, Igor (2010) Partial genome analysis of Siberian sturgeon alloherpesvirus suggests its close relation to AciHV-2 — Short communication. Acta Veterinaria Hungarica, 58 (2). pp. 269-274. ISSN 0236-6290
op_doi https://doi.org/10.1556/AVet.58.2010.2.13
container_title Acta Veterinaria Hungarica
container_volume 58
container_issue 2
container_start_page 269
op_container_end_page 274
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