Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals

Thesis (Ph. D.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Biology; and the Woods Hole Oceanographic Institution), 2007. Includes bibliographical references. Marine mammals possess high body burdens of persistent organic pollutants, including PCBs and dioxin-like...

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Main Author: Lapseritis, Joy M
Other Authors: Mark E. Hahn., Woods Hole Oceanographic Institution., Joint Program in Oceanography, Massachusetts Institute of Technology. Dept. of Biology., Massachusetts Institute of Technology. Department of Biology
Format: Thesis
Language:English
Published: Massachusetts Institute of Technology 2007
Subjects:
Online Access:http://hdl.handle.net/1721.1/38636
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spelling ftmit:oai:dspace.mit.edu:1721.1/38636 2023-06-11T04:12:31+02:00 Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals Lapseritis, Joy M Mark E. Hahn. Woods Hole Oceanographic Institution. Joint Program in Oceanography Massachusetts Institute of Technology. Dept. of Biology. Massachusetts Institute of Technology. Department of Biology 2007 160 leaves application/pdf http://hdl.handle.net/1721.1/38636 eng eng Massachusetts Institute of Technology http://hdl.handle.net/1721.1/38636 157023694 M.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission. http://dspace.mit.edu/handle/1721.1/7582 Joint Program in Oceanography Biology Woods Hole Oceanographic Institution Thesis 2007 ftmit 2023-05-29T07:26:29Z Thesis (Ph. D.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Biology; and the Woods Hole Oceanographic Institution), 2007. Includes bibliographical references. Marine mammals possess high body burdens of persistent organic pollutants, including PCBs and dioxin-like compounds (DLC). Chronic environmental or dietary exposure to these chemicals can disrupt the function of reproductive and immune systems, as well as cause developmental defects in laboratory animals. The aryl hydrocarbon receptor (AHR) is a ligand-activated transcription factor, mediating the expression of a suite of genes in response to exposure to DLC and structurally related chemicals. Species-specific differences in AHR structure can affect an organism's susceptibility to the effects of DLC. The structures and functions of several cetacean AHRs were investigated using in vitro molecular cloning and biochemical techniques. Using a novel combination of remote biopsy and molecular cloning methods, RNA was extracted from small integument samples from living North Atlantic right whales to identify the cDNA sequence for AHR and other genes of physiological importance. Biopsy-derived RNA was found to be of higher quality than RNA extracted from stranded cetaceans, and proved a good source for identifying cDNA sequences for expressed genes. (cont.) The molecular sequences, binding constants, and transcriptional activities for North Atlantic right whale and humpback whale AHRs cDNAs were determined using in vitro and cell culture methods. Whale AHRs are capable of specifically binding dioxin and initiating transcription of reporter genes. The properties of these AHRs were compared with those from other mammalian species, including human, mouse, hamster, and guinea pig, and other novel marine mammal AHRs, using biochemical, phylogenetic, and homology modeling analyses. The relative binding affinities for some marine mammal AHRs fall between those for the high-affinity mouse AHRb-1 and the lower affinity human AHR. ... Thesis Humpback Whale North Atlantic North Atlantic right whale DSpace@MIT (Massachusetts Institute of Technology)
institution Open Polar
collection DSpace@MIT (Massachusetts Institute of Technology)
op_collection_id ftmit
language English
topic Joint Program in Oceanography
Biology
Woods Hole Oceanographic Institution
spellingShingle Joint Program in Oceanography
Biology
Woods Hole Oceanographic Institution
Lapseritis, Joy M
Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
topic_facet Joint Program in Oceanography
Biology
Woods Hole Oceanographic Institution
description Thesis (Ph. D.)--Joint Program in Oceanography (Massachusetts Institute of Technology, Dept. of Biology; and the Woods Hole Oceanographic Institution), 2007. Includes bibliographical references. Marine mammals possess high body burdens of persistent organic pollutants, including PCBs and dioxin-like compounds (DLC). Chronic environmental or dietary exposure to these chemicals can disrupt the function of reproductive and immune systems, as well as cause developmental defects in laboratory animals. The aryl hydrocarbon receptor (AHR) is a ligand-activated transcription factor, mediating the expression of a suite of genes in response to exposure to DLC and structurally related chemicals. Species-specific differences in AHR structure can affect an organism's susceptibility to the effects of DLC. The structures and functions of several cetacean AHRs were investigated using in vitro molecular cloning and biochemical techniques. Using a novel combination of remote biopsy and molecular cloning methods, RNA was extracted from small integument samples from living North Atlantic right whales to identify the cDNA sequence for AHR and other genes of physiological importance. Biopsy-derived RNA was found to be of higher quality than RNA extracted from stranded cetaceans, and proved a good source for identifying cDNA sequences for expressed genes. (cont.) The molecular sequences, binding constants, and transcriptional activities for North Atlantic right whale and humpback whale AHRs cDNAs were determined using in vitro and cell culture methods. Whale AHRs are capable of specifically binding dioxin and initiating transcription of reporter genes. The properties of these AHRs were compared with those from other mammalian species, including human, mouse, hamster, and guinea pig, and other novel marine mammal AHRs, using biochemical, phylogenetic, and homology modeling analyses. The relative binding affinities for some marine mammal AHRs fall between those for the high-affinity mouse AHRb-1 and the lower affinity human AHR. ...
author2 Mark E. Hahn.
Woods Hole Oceanographic Institution.
Joint Program in Oceanography
Massachusetts Institute of Technology. Dept. of Biology.
Massachusetts Institute of Technology. Department of Biology
format Thesis
author Lapseritis, Joy M
author_facet Lapseritis, Joy M
author_sort Lapseritis, Joy M
title Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
title_short Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
title_full Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
title_fullStr Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
title_full_unstemmed Comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
title_sort comparative analyses of aryl hydrocarbon receptor structure, function, and evolution in marine mammals
publisher Massachusetts Institute of Technology
publishDate 2007
url http://hdl.handle.net/1721.1/38636
genre Humpback Whale
North Atlantic
North Atlantic right whale
genre_facet Humpback Whale
North Atlantic
North Atlantic right whale
op_relation http://hdl.handle.net/1721.1/38636
157023694
op_rights M.I.T. theses are protected by copyright. They may be viewed from this source for any purpose, but reproduction or distribution in any format is prohibited without written permission. See provided URL for inquiries about permission.
http://dspace.mit.edu/handle/1721.1/7582
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