Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an appr...
Published in: | Fishes |
---|---|
Main Authors: | , , , , , , , , , , , , |
Format: | Text |
Language: | English |
Published: |
Multidisciplinary Digital Publishing Institute
2022
|
Subjects: | |
Online Access: | https://doi.org/10.3390/fishes7010052 |
id |
ftmdpi:oai:mdpi.com:/2410-3888/7/1/52/ |
---|---|
record_format |
openpolar |
spelling |
ftmdpi:oai:mdpi.com:/2410-3888/7/1/52/ 2023-08-20T04:08:40+02:00 Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus Ana Neves Ana Rita Vieira Vera Sequeira Elisabete Silva Frederica Silva Ana Marta Duarte Susana Mendes Rui Ganhão Carlos Assis Rui Rebelo Maria Filomena Magalhães Maria Manuel Gil Leonel Serrano Gordo agris 2022-02-18 application/pdf https://doi.org/10.3390/fishes7010052 EN eng Multidisciplinary Digital Publishing Institute Fishery Economics, Policy, and Management https://dx.doi.org/10.3390/fishes7010052 https://creativecommons.org/licenses/by/4.0/ Fishes; Volume 7; Issue 1; Pages: 52 Bayesian Carangidae fisheries mortality Text 2022 ftmdpi https://doi.org/10.3390/fishes7010052 2023-08-01T04:12:07Z Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an approach to improve plausibility in growth estimates when small individuals are under-sampled, based on Bayesian fitting growth models using Markov Chain Monte Carlo (MCMC) with informative priors on growth parameters. Focusing on the blue jack mackerel, Trachurus picturatus, which is an important commercial fish in the southern northeast Atlantic, this Bayesian approach was evaluated in relation to standard growth model fitting methods, using both direct readings and back-calculation data. Matched growth parameter estimates were obtained with the von Bertalanffy growth function applied to back-calculated length at age and the Bayesian fitting, using MCMC to direct age readings, with both outperforming all other methods assessed. These results indicate that Bayesian inference may be a powerful addition in growth modelling using imperfect data and should be considered further in age and growth studies, provided relevant biological information can be gathered and included in the analyses. Text Northeast Atlantic MDPI Open Access Publishing Fishes 7 1 52 |
institution |
Open Polar |
collection |
MDPI Open Access Publishing |
op_collection_id |
ftmdpi |
language |
English |
topic |
Bayesian Carangidae fisheries mortality |
spellingShingle |
Bayesian Carangidae fisheries mortality Ana Neves Ana Rita Vieira Vera Sequeira Elisabete Silva Frederica Silva Ana Marta Duarte Susana Mendes Rui Ganhão Carlos Assis Rui Rebelo Maria Filomena Magalhães Maria Manuel Gil Leonel Serrano Gordo Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus |
topic_facet |
Bayesian Carangidae fisheries mortality |
description |
Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an approach to improve plausibility in growth estimates when small individuals are under-sampled, based on Bayesian fitting growth models using Markov Chain Monte Carlo (MCMC) with informative priors on growth parameters. Focusing on the blue jack mackerel, Trachurus picturatus, which is an important commercial fish in the southern northeast Atlantic, this Bayesian approach was evaluated in relation to standard growth model fitting methods, using both direct readings and back-calculation data. Matched growth parameter estimates were obtained with the von Bertalanffy growth function applied to back-calculated length at age and the Bayesian fitting, using MCMC to direct age readings, with both outperforming all other methods assessed. These results indicate that Bayesian inference may be a powerful addition in growth modelling using imperfect data and should be considered further in age and growth studies, provided relevant biological information can be gathered and included in the analyses. |
format |
Text |
author |
Ana Neves Ana Rita Vieira Vera Sequeira Elisabete Silva Frederica Silva Ana Marta Duarte Susana Mendes Rui Ganhão Carlos Assis Rui Rebelo Maria Filomena Magalhães Maria Manuel Gil Leonel Serrano Gordo |
author_facet |
Ana Neves Ana Rita Vieira Vera Sequeira Elisabete Silva Frederica Silva Ana Marta Duarte Susana Mendes Rui Ganhão Carlos Assis Rui Rebelo Maria Filomena Magalhães Maria Manuel Gil Leonel Serrano Gordo |
author_sort |
Ana Neves |
title |
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus |
title_short |
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus |
title_full |
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus |
title_fullStr |
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus |
title_full_unstemmed |
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus |
title_sort |
modelling fish growth with imperfect data: the case of trachurus picturatus |
publisher |
Multidisciplinary Digital Publishing Institute |
publishDate |
2022 |
url |
https://doi.org/10.3390/fishes7010052 |
op_coverage |
agris |
genre |
Northeast Atlantic |
genre_facet |
Northeast Atlantic |
op_source |
Fishes; Volume 7; Issue 1; Pages: 52 |
op_relation |
Fishery Economics, Policy, and Management https://dx.doi.org/10.3390/fishes7010052 |
op_rights |
https://creativecommons.org/licenses/by/4.0/ |
op_doi |
https://doi.org/10.3390/fishes7010052 |
container_title |
Fishes |
container_volume |
7 |
container_issue |
1 |
container_start_page |
52 |
_version_ |
1774721088243105792 |