Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus

Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an appr...

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Published in:Fishes
Main Authors: Ana Neves, Ana Rita Vieira, Vera Sequeira, Elisabete Silva, Frederica Silva, Ana Marta Duarte, Susana Mendes, Rui Ganhão, Carlos Assis, Rui Rebelo, Maria Filomena Magalhães, Maria Manuel Gil, Leonel Serrano Gordo
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2022
Subjects:
Online Access:https://doi.org/10.3390/fishes7010052
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spelling ftmdpi:oai:mdpi.com:/2410-3888/7/1/52/ 2023-08-20T04:08:40+02:00 Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus Ana Neves Ana Rita Vieira Vera Sequeira Elisabete Silva Frederica Silva Ana Marta Duarte Susana Mendes Rui Ganhão Carlos Assis Rui Rebelo Maria Filomena Magalhães Maria Manuel Gil Leonel Serrano Gordo agris 2022-02-18 application/pdf https://doi.org/10.3390/fishes7010052 EN eng Multidisciplinary Digital Publishing Institute Fishery Economics, Policy, and Management https://dx.doi.org/10.3390/fishes7010052 https://creativecommons.org/licenses/by/4.0/ Fishes; Volume 7; Issue 1; Pages: 52 Bayesian Carangidae fisheries mortality Text 2022 ftmdpi https://doi.org/10.3390/fishes7010052 2023-08-01T04:12:07Z Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an approach to improve plausibility in growth estimates when small individuals are under-sampled, based on Bayesian fitting growth models using Markov Chain Monte Carlo (MCMC) with informative priors on growth parameters. Focusing on the blue jack mackerel, Trachurus picturatus, which is an important commercial fish in the southern northeast Atlantic, this Bayesian approach was evaluated in relation to standard growth model fitting methods, using both direct readings and back-calculation data. Matched growth parameter estimates were obtained with the von Bertalanffy growth function applied to back-calculated length at age and the Bayesian fitting, using MCMC to direct age readings, with both outperforming all other methods assessed. These results indicate that Bayesian inference may be a powerful addition in growth modelling using imperfect data and should be considered further in age and growth studies, provided relevant biological information can be gathered and included in the analyses. Text Northeast Atlantic MDPI Open Access Publishing Fishes 7 1 52
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Bayesian
Carangidae
fisheries
mortality
spellingShingle Bayesian
Carangidae
fisheries
mortality
Ana Neves
Ana Rita Vieira
Vera Sequeira
Elisabete Silva
Frederica Silva
Ana Marta Duarte
Susana Mendes
Rui Ganhão
Carlos Assis
Rui Rebelo
Maria Filomena Magalhães
Maria Manuel Gil
Leonel Serrano Gordo
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
topic_facet Bayesian
Carangidae
fisheries
mortality
description Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an approach to improve plausibility in growth estimates when small individuals are under-sampled, based on Bayesian fitting growth models using Markov Chain Monte Carlo (MCMC) with informative priors on growth parameters. Focusing on the blue jack mackerel, Trachurus picturatus, which is an important commercial fish in the southern northeast Atlantic, this Bayesian approach was evaluated in relation to standard growth model fitting methods, using both direct readings and back-calculation data. Matched growth parameter estimates were obtained with the von Bertalanffy growth function applied to back-calculated length at age and the Bayesian fitting, using MCMC to direct age readings, with both outperforming all other methods assessed. These results indicate that Bayesian inference may be a powerful addition in growth modelling using imperfect data and should be considered further in age and growth studies, provided relevant biological information can be gathered and included in the analyses.
format Text
author Ana Neves
Ana Rita Vieira
Vera Sequeira
Elisabete Silva
Frederica Silva
Ana Marta Duarte
Susana Mendes
Rui Ganhão
Carlos Assis
Rui Rebelo
Maria Filomena Magalhães
Maria Manuel Gil
Leonel Serrano Gordo
author_facet Ana Neves
Ana Rita Vieira
Vera Sequeira
Elisabete Silva
Frederica Silva
Ana Marta Duarte
Susana Mendes
Rui Ganhão
Carlos Assis
Rui Rebelo
Maria Filomena Magalhães
Maria Manuel Gil
Leonel Serrano Gordo
author_sort Ana Neves
title Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_short Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_full Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_fullStr Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_full_unstemmed Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_sort modelling fish growth with imperfect data: the case of trachurus picturatus
publisher Multidisciplinary Digital Publishing Institute
publishDate 2022
url https://doi.org/10.3390/fishes7010052
op_coverage agris
genre Northeast Atlantic
genre_facet Northeast Atlantic
op_source Fishes; Volume 7; Issue 1; Pages: 52
op_relation Fishery Economics, Policy, and Management
https://dx.doi.org/10.3390/fishes7010052
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/fishes7010052
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