Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China

Ecological adaptation plays an important role in the process of plant expansion, and genetics and epigenetics are important in the process of plant adaptation. In this study, genetic and epigenetic analyses and soil properties were performed on D. angustifolia of 17 populations, which were selected...

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Published in:Plants
Main Authors: Biao Ni, Jian You, Jiangnan Li, Yingda Du, Wei Zhao, Xia Chen
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2021
Subjects:
Online Access:https://doi.org/10.3390/plants10020291
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spelling ftmdpi:oai:mdpi.com:/2223-7747/10/2/291/ 2023-08-20T04:10:13+02:00 Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China Biao Ni Jian You Jiangnan Li Yingda Du Wei Zhao Xia Chen agris 2021-02-03 application/pdf https://doi.org/10.3390/plants10020291 EN eng Multidisciplinary Digital Publishing Institute Plant Genetics, Genomics and Biotechnology https://dx.doi.org/10.3390/plants10020291 https://creativecommons.org/licenses/by/4.0/ Plants; Volume 10; Issue 2; Pages: 291 Deyeuxia angustifolia Kom. upward expansion genetic epigenetic adaptation Text 2021 ftmdpi https://doi.org/10.3390/plants10020291 2023-08-01T01:00:08Z Ecological adaptation plays an important role in the process of plant expansion, and genetics and epigenetics are important in the process of plant adaptation. In this study, genetic and epigenetic analyses and soil properties were performed on D. angustifolia of 17 populations, which were selected in the tundra zone on the western slope of the Changbai Mountains. Our results showed that the levels of genetic and epigenetic diversity of D. angustifolia were relatively low, and the main variation occurred among different populations (amplified fragment length polymorphism (AFLP): 95%, methylation sensitive amplification polymorphism (MSAP): 87%). In addition, DNA methylation levels varied from 23.36% to 35.70%. Principal component analysis (PCA) results showed that soil properties of different populations were heterogeneous. Correlation analyses showed that soil moisture, pH and total nitrogen were significantly correlated with genetic diversity of D. angustifolia, and soil temperature and pH were closely related to epigenetic diversity. Simple Mantel tests and partial Mantel tests showed that genetic variation significantly correlated with habitat or geographical distance. However, the correlation between epigenetic variation and habitat or geographical distance was not significant. Our results showed that, in the case of low genetic variation and genetic diversity, epigenetic variation and DNA methylation may provide a basis for the adaptation of D. angustifolia. Text Tundra MDPI Open Access Publishing Plants 10 2 291
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Deyeuxia angustifolia Kom.
upward expansion
genetic
epigenetic
adaptation
spellingShingle Deyeuxia angustifolia Kom.
upward expansion
genetic
epigenetic
adaptation
Biao Ni
Jian You
Jiangnan Li
Yingda Du
Wei Zhao
Xia Chen
Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China
topic_facet Deyeuxia angustifolia Kom.
upward expansion
genetic
epigenetic
adaptation
description Ecological adaptation plays an important role in the process of plant expansion, and genetics and epigenetics are important in the process of plant adaptation. In this study, genetic and epigenetic analyses and soil properties were performed on D. angustifolia of 17 populations, which were selected in the tundra zone on the western slope of the Changbai Mountains. Our results showed that the levels of genetic and epigenetic diversity of D. angustifolia were relatively low, and the main variation occurred among different populations (amplified fragment length polymorphism (AFLP): 95%, methylation sensitive amplification polymorphism (MSAP): 87%). In addition, DNA methylation levels varied from 23.36% to 35.70%. Principal component analysis (PCA) results showed that soil properties of different populations were heterogeneous. Correlation analyses showed that soil moisture, pH and total nitrogen were significantly correlated with genetic diversity of D. angustifolia, and soil temperature and pH were closely related to epigenetic diversity. Simple Mantel tests and partial Mantel tests showed that genetic variation significantly correlated with habitat or geographical distance. However, the correlation between epigenetic variation and habitat or geographical distance was not significant. Our results showed that, in the case of low genetic variation and genetic diversity, epigenetic variation and DNA methylation may provide a basis for the adaptation of D. angustifolia.
format Text
author Biao Ni
Jian You
Jiangnan Li
Yingda Du
Wei Zhao
Xia Chen
author_facet Biao Ni
Jian You
Jiangnan Li
Yingda Du
Wei Zhao
Xia Chen
author_sort Biao Ni
title Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China
title_short Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China
title_full Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China
title_fullStr Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China
title_full_unstemmed Genetic and Epigenetic Changes during the Upward Expansion of Deyeuxia angustifolia Kom. in the Alpine Tundra of the Changbai Mountains, China
title_sort genetic and epigenetic changes during the upward expansion of deyeuxia angustifolia kom. in the alpine tundra of the changbai mountains, china
publisher Multidisciplinary Digital Publishing Institute
publishDate 2021
url https://doi.org/10.3390/plants10020291
op_coverage agris
genre Tundra
genre_facet Tundra
op_source Plants; Volume 10; Issue 2; Pages: 291
op_relation Plant Genetics, Genomics and Biotechnology
https://dx.doi.org/10.3390/plants10020291
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/plants10020291
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