Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernev...
Published in: | Microorganisms |
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Main Authors: | , , |
Format: | Text |
Language: | English |
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Multidisciplinary Digital Publishing Institute
2024
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Online Access: | https://doi.org/10.3390/microorganisms12122599 |
_version_ | 1821725449588310016 |
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author | Mikhail Rayko Irina Kravchenko Alla Lapidus |
author_facet | Mikhail Rayko Irina Kravchenko Alla Lapidus |
author_sort | Mikhail Rayko |
collection | MDPI Open Access Publishing |
container_issue | 12 |
container_start_page | 2599 |
container_title | Microorganisms |
container_volume | 12 |
description | A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernevaya taiga of Western Siberia, a unique and fertile forest ecosystem known for its diverse plant growth-promoting bacteria (PGPB). The A. doebereinerae genome under study is fully assembled into seven circular molecules, none of which are unequivocally plasmids, with a total length of 6.94 Mb and a G + C content of 68.66%. A detailed phylogenomic analysis confirmed its placement within the genus Azospirillum, specifically closely related to A. doebereinerae GSF71T. Functional annotation revealed genes involved in nitrogen metabolism, highlighting the potential of strain TA as a biofertilizer and plant growth-promoting agent. The findings contribute to our understanding of the genomic diversity and metabolic potential of the Azospirillum genus, and they are of interest for further study in the field of comparative bacterial genomics, given the strain’s multi-chromosomal genome structure. |
format | Text |
genre | taiga Siberia |
genre_facet | taiga Siberia |
id | ftmdpi:oai:mdpi.com:/2076-2607/12/12/2599/ |
institution | Open Polar |
language | English |
op_collection_id | ftmdpi |
op_coverage | agris |
op_doi | https://doi.org/10.3390/microorganisms12122599 |
op_relation | Environmental Microbiology https://dx.doi.org/10.3390/microorganisms12122599 |
op_rights | https://creativecommons.org/licenses/by/4.0/ |
op_source | Microorganisms Volume 12 Issue 12 Pages: 2599 |
publishDate | 2024 |
publisher | Multidisciplinary Digital Publishing Institute |
record_format | openpolar |
spelling | ftmdpi:oai:mdpi.com:/2076-2607/12/12/2599/ 2025-01-17T01:03:13+00:00 Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil Mikhail Rayko Irina Kravchenko Alla Lapidus agris 2024-12-16 application/pdf https://doi.org/10.3390/microorganisms12122599 eng eng Multidisciplinary Digital Publishing Institute Environmental Microbiology https://dx.doi.org/10.3390/microorganisms12122599 https://creativecommons.org/licenses/by/4.0/ Microorganisms Volume 12 Issue 12 Pages: 2599 Azospirillum PGPB chromids whole-genome assembly Text 2024 ftmdpi https://doi.org/10.3390/microorganisms12122599 2024-12-20T01:13:48Z A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernevaya taiga of Western Siberia, a unique and fertile forest ecosystem known for its diverse plant growth-promoting bacteria (PGPB). The A. doebereinerae genome under study is fully assembled into seven circular molecules, none of which are unequivocally plasmids, with a total length of 6.94 Mb and a G + C content of 68.66%. A detailed phylogenomic analysis confirmed its placement within the genus Azospirillum, specifically closely related to A. doebereinerae GSF71T. Functional annotation revealed genes involved in nitrogen metabolism, highlighting the potential of strain TA as a biofertilizer and plant growth-promoting agent. The findings contribute to our understanding of the genomic diversity and metabolic potential of the Azospirillum genus, and they are of interest for further study in the field of comparative bacterial genomics, given the strain’s multi-chromosomal genome structure. Text taiga Siberia MDPI Open Access Publishing Microorganisms 12 12 2599 |
spellingShingle | Azospirillum PGPB chromids whole-genome assembly Mikhail Rayko Irina Kravchenko Alla Lapidus Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil |
title | Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil |
title_full | Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil |
title_fullStr | Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil |
title_full_unstemmed | Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil |
title_short | Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil |
title_sort | complete genome sequence of a novel azospirillum strain ta isolated from western siberia chernevaya taiga soil |
topic | Azospirillum PGPB chromids whole-genome assembly |
topic_facet | Azospirillum PGPB chromids whole-genome assembly |
url | https://doi.org/10.3390/microorganisms12122599 |