Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil

A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernev...

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Published in:Microorganisms
Main Authors: Mikhail Rayko, Irina Kravchenko, Alla Lapidus
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2024
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Online Access:https://doi.org/10.3390/microorganisms12122599
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author Mikhail Rayko
Irina Kravchenko
Alla Lapidus
author_facet Mikhail Rayko
Irina Kravchenko
Alla Lapidus
author_sort Mikhail Rayko
collection MDPI Open Access Publishing
container_issue 12
container_start_page 2599
container_title Microorganisms
container_volume 12
description A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernevaya taiga of Western Siberia, a unique and fertile forest ecosystem known for its diverse plant growth-promoting bacteria (PGPB). The A. doebereinerae genome under study is fully assembled into seven circular molecules, none of which are unequivocally plasmids, with a total length of 6.94 Mb and a G + C content of 68.66%. A detailed phylogenomic analysis confirmed its placement within the genus Azospirillum, specifically closely related to A. doebereinerae GSF71T. Functional annotation revealed genes involved in nitrogen metabolism, highlighting the potential of strain TA as a biofertilizer and plant growth-promoting agent. The findings contribute to our understanding of the genomic diversity and metabolic potential of the Azospirillum genus, and they are of interest for further study in the field of comparative bacterial genomics, given the strain’s multi-chromosomal genome structure.
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spelling ftmdpi:oai:mdpi.com:/2076-2607/12/12/2599/ 2025-01-17T01:03:13+00:00 Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil Mikhail Rayko Irina Kravchenko Alla Lapidus agris 2024-12-16 application/pdf https://doi.org/10.3390/microorganisms12122599 eng eng Multidisciplinary Digital Publishing Institute Environmental Microbiology https://dx.doi.org/10.3390/microorganisms12122599 https://creativecommons.org/licenses/by/4.0/ Microorganisms Volume 12 Issue 12 Pages: 2599 Azospirillum PGPB chromids whole-genome assembly Text 2024 ftmdpi https://doi.org/10.3390/microorganisms12122599 2024-12-20T01:13:48Z A whole genome sequence of a new strain of the nitrogen-fixing bacterium Azospirillum doebereinerae, known for its diverse plant growth-promoting bacteria (PGPB), was obtained for the first time. The strain, designated Azospirillum doebereinerae AT, was isolated during a soil analysis in the Chernevaya taiga of Western Siberia, a unique and fertile forest ecosystem known for its diverse plant growth-promoting bacteria (PGPB). The A. doebereinerae genome under study is fully assembled into seven circular molecules, none of which are unequivocally plasmids, with a total length of 6.94 Mb and a G + C content of 68.66%. A detailed phylogenomic analysis confirmed its placement within the genus Azospirillum, specifically closely related to A. doebereinerae GSF71T. Functional annotation revealed genes involved in nitrogen metabolism, highlighting the potential of strain TA as a biofertilizer and plant growth-promoting agent. The findings contribute to our understanding of the genomic diversity and metabolic potential of the Azospirillum genus, and they are of interest for further study in the field of comparative bacterial genomics, given the strain’s multi-chromosomal genome structure. Text taiga Siberia MDPI Open Access Publishing Microorganisms 12 12 2599
spellingShingle Azospirillum
PGPB
chromids
whole-genome assembly
Mikhail Rayko
Irina Kravchenko
Alla Lapidus
Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
title Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
title_full Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
title_fullStr Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
title_full_unstemmed Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
title_short Complete Genome Sequence of a Novel Azospirillum Strain TA Isolated from Western Siberia Chernevaya Taiga Soil
title_sort complete genome sequence of a novel azospirillum strain ta isolated from western siberia chernevaya taiga soil
topic Azospirillum
PGPB
chromids
whole-genome assembly
topic_facet Azospirillum
PGPB
chromids
whole-genome assembly
url https://doi.org/10.3390/microorganisms12122599