Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems

Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study charact...

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Published in:Microorganisms
Main Authors: Kang Eun Kim, Hyoung Min Joo, Taek-Kyun Lee, Hyun-Jung Kim, Yu Jin Kim, Bo Kyung Kim, Sun-Yong Ha, Seung Won Jung
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2023
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Online Access:https://doi.org/10.3390/microorganisms11010169
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spelling ftmdpi:oai:mdpi.com:/2076-2607/11/1/169/ 2023-08-20T04:03:52+02:00 Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems Kang Eun Kim Hyoung Min Joo Taek-Kyun Lee Hyun-Jung Kim Yu Jin Kim Bo Kyung Kim Sun-Yong Ha Seung Won Jung agris 2023-01-09 application/pdf https://doi.org/10.3390/microorganisms11010169 EN eng Multidisciplinary Digital Publishing Institute Virology https://dx.doi.org/10.3390/microorganisms11010169 https://creativecommons.org/licenses/by/4.0/ Microorganisms; Volume 11; Issue 1; Pages: 169 Aureococcus anophagefferens eukaryotic plankton communities Gyrodinium helveticum metagenomics nucleocytoplasmic large DNA viruses sub-arctic sea Text 2023 ftmdpi https://doi.org/10.3390/microorganisms11010169 2023-08-01T08:12:40Z Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. Gyrodinium helveticum (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time Mimiviridae (31.8%), Poxviridae (25.1%), Phycodnaviridae (14.7%) and Pandoraviridae (13.1%) predominate. However, in June, the predominant taxon is Aureococcus anophagefferens (Pelagophyceae), and the NCLDVs, Poxviridae (32.9%), Mimiviridae (29.1%), and Phycodnaviridae (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem. Text Arctic Kongsfjord* Kongsfjorden Svalbard MDPI Open Access Publishing Arctic Svalbard Norway Microorganisms 11 1 169
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Aureococcus anophagefferens
eukaryotic plankton communities
Gyrodinium helveticum
metagenomics
nucleocytoplasmic large DNA viruses
sub-arctic sea
spellingShingle Aureococcus anophagefferens
eukaryotic plankton communities
Gyrodinium helveticum
metagenomics
nucleocytoplasmic large DNA viruses
sub-arctic sea
Kang Eun Kim
Hyoung Min Joo
Taek-Kyun Lee
Hyun-Jung Kim
Yu Jin Kim
Bo Kyung Kim
Sun-Yong Ha
Seung Won Jung
Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
topic_facet Aureococcus anophagefferens
eukaryotic plankton communities
Gyrodinium helveticum
metagenomics
nucleocytoplasmic large DNA viruses
sub-arctic sea
description Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. Gyrodinium helveticum (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time Mimiviridae (31.8%), Poxviridae (25.1%), Phycodnaviridae (14.7%) and Pandoraviridae (13.1%) predominate. However, in June, the predominant taxon is Aureococcus anophagefferens (Pelagophyceae), and the NCLDVs, Poxviridae (32.9%), Mimiviridae (29.1%), and Phycodnaviridae (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem.
format Text
author Kang Eun Kim
Hyoung Min Joo
Taek-Kyun Lee
Hyun-Jung Kim
Yu Jin Kim
Bo Kyung Kim
Sun-Yong Ha
Seung Won Jung
author_facet Kang Eun Kim
Hyoung Min Joo
Taek-Kyun Lee
Hyun-Jung Kim
Yu Jin Kim
Bo Kyung Kim
Sun-Yong Ha
Seung Won Jung
author_sort Kang Eun Kim
title Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_short Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_full Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_fullStr Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_full_unstemmed Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_sort covariance of marine nucleocytoplasmic large dna viruses with eukaryotic plankton communities in the sub-arctic kongsfjorden ecosystem: a metagenomic analysis of marine microbial ecosystems
publisher Multidisciplinary Digital Publishing Institute
publishDate 2023
url https://doi.org/10.3390/microorganisms11010169
op_coverage agris
geographic Arctic
Svalbard
Norway
geographic_facet Arctic
Svalbard
Norway
genre Arctic
Kongsfjord*
Kongsfjorden
Svalbard
genre_facet Arctic
Kongsfjord*
Kongsfjorden
Svalbard
op_source Microorganisms; Volume 11; Issue 1; Pages: 169
op_relation Virology
https://dx.doi.org/10.3390/microorganisms11010169
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/microorganisms11010169
container_title Microorganisms
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container_issue 1
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