Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities

Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incomp...

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Published in:Life
Main Authors: Giuseppina Fanelli, Claudia Coleine, Federica Gevi, Silvano Onofri, Laura Selbmann, Anna Maria Timperio
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2021
Subjects:
Online Access:https://doi.org/10.3390/life11020096
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spelling ftmdpi:oai:mdpi.com:/2075-1729/11/2/96/ 2023-08-20T04:01:03+02:00 Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities Giuseppina Fanelli Claudia Coleine Federica Gevi Silvano Onofri Laura Selbmann Anna Maria Timperio agris 2021-01-27 application/pdf https://doi.org/10.3390/life11020096 EN eng Multidisciplinary Digital Publishing Institute Microbiology https://dx.doi.org/10.3390/life11020096 https://creativecommons.org/licenses/by/4.0/ Life; Volume 11; Issue 2; Pages: 96 Antarctica cryptoendolithic communities untargeted metabolomics adaptation extremophiles sun exposure Text 2021 ftmdpi https://doi.org/10.3390/life11020096 2023-08-01T00:57:06Z Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incompatible with active life. If high-throughput sequencing based studies are unravelling prokaryotic and eukaryotic diversity, they are not yet characterized in terms of stress adaptations and responses, despite their paramount ecological importance. In this study, we compared the responses of Antarctic endolithic communities, with special focus on fungi, both under dry conditions (i.e., when dormant), and after reanimation by wetting, light, and optimal temperature (15 °C). We found that several metabolites were differently expressed in reanimated opposite sun exposed communities, suggesting a critical role in their success. In particular, the saccharopine pathway was up-regulated in the north surface, while the spermine/spermidine pathway was significantly down-regulated in the shaded exposed communities. The carnitine-dependent pathway is up-regulated in south-exposed reanimated samples, indicating the preferential involvement of the B-oxidation for the functioning of TCA cycle. The role of these metabolites in the performance of the communities is discussed herein. Text Antarc* Antarctic Antarctica MDPI Open Access Publishing Antarctic The Antarctic Life 11 2 96
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Antarctica
cryptoendolithic communities
untargeted metabolomics
adaptation
extremophiles
sun exposure
spellingShingle Antarctica
cryptoendolithic communities
untargeted metabolomics
adaptation
extremophiles
sun exposure
Giuseppina Fanelli
Claudia Coleine
Federica Gevi
Silvano Onofri
Laura Selbmann
Anna Maria Timperio
Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
topic_facet Antarctica
cryptoendolithic communities
untargeted metabolomics
adaptation
extremophiles
sun exposure
description Cryptoendolithic communities are almost the sole life form in the ice-free areas of the Antarctic desert, encompassing among the most extreme-tolerant organisms known on Earth that still assure ecosystems functioning, regulating nutrient and biogeochemical cycles under conditions accounted as incompatible with active life. If high-throughput sequencing based studies are unravelling prokaryotic and eukaryotic diversity, they are not yet characterized in terms of stress adaptations and responses, despite their paramount ecological importance. In this study, we compared the responses of Antarctic endolithic communities, with special focus on fungi, both under dry conditions (i.e., when dormant), and after reanimation by wetting, light, and optimal temperature (15 °C). We found that several metabolites were differently expressed in reanimated opposite sun exposed communities, suggesting a critical role in their success. In particular, the saccharopine pathway was up-regulated in the north surface, while the spermine/spermidine pathway was significantly down-regulated in the shaded exposed communities. The carnitine-dependent pathway is up-regulated in south-exposed reanimated samples, indicating the preferential involvement of the B-oxidation for the functioning of TCA cycle. The role of these metabolites in the performance of the communities is discussed herein.
format Text
author Giuseppina Fanelli
Claudia Coleine
Federica Gevi
Silvano Onofri
Laura Selbmann
Anna Maria Timperio
author_facet Giuseppina Fanelli
Claudia Coleine
Federica Gevi
Silvano Onofri
Laura Selbmann
Anna Maria Timperio
author_sort Giuseppina Fanelli
title Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_short Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_full Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_fullStr Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_full_unstemmed Metabolomics of Dry Versus Reanimated Antarctic Lichen-Dominated Endolithic Communities
title_sort metabolomics of dry versus reanimated antarctic lichen-dominated endolithic communities
publisher Multidisciplinary Digital Publishing Institute
publishDate 2021
url https://doi.org/10.3390/life11020096
op_coverage agris
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_source Life; Volume 11; Issue 2; Pages: 96
op_relation Microbiology
https://dx.doi.org/10.3390/life11020096
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/life11020096
container_title Life
container_volume 11
container_issue 2
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