Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities

Lichens have developed numerous adaptations to optimise their survival under harsh abiotic stress, colonise different substrates, and reach substantial population sizes and high coverage in ice-free Antarctic areas, benefiting from a symbiotic lifestyle. As lichen thalli represent consortia with an...

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Published in:Genes
Main Authors: Andreas Beck, Angélica Casanova-Katny, Julia Gerasimova
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2023
Subjects:
Online Access:https://doi.org/10.3390/genes14051019
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spelling ftmdpi:oai:mdpi.com:/2073-4425/14/5/1019/ 2023-08-20T04:01:32+02:00 Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities Andreas Beck Angélica Casanova-Katny Julia Gerasimova agris 2023-04-29 application/pdf https://doi.org/10.3390/genes14051019 EN eng Multidisciplinary Digital Publishing Institute Population and Evolutionary Genetics and Genomics https://dx.doi.org/10.3390/genes14051019 https://creativecommons.org/licenses/by/4.0/ Genes; Volume 14; Issue 5; Pages: 1019 Himantormia Placopsis Ramalina lichen-associated eukaryotes deglaciation time Text 2023 ftmdpi https://doi.org/10.3390/genes14051019 2023-08-01T09:54:37Z Lichens have developed numerous adaptations to optimise their survival under harsh abiotic stress, colonise different substrates, and reach substantial population sizes and high coverage in ice-free Antarctic areas, benefiting from a symbiotic lifestyle. As lichen thalli represent consortia with an unknown number of participants, it is important to know about the accessory organisms and their relationships with various environmental conditions. To this end, we analysed lichen-associated communities from Himantormia lugubris, Placopsis antarctica, P. contortuplicata, and Ramalina terebrata, collected from soils with differing deglaciation times, using a metabarcoding approach. In general, many more Ascomycete taxa are associated with the investigated lichens compared to Basidiomycota. Given our sampling, a consistently higher number of lichen-associated eukaryotes are estimated to be present in areas with deglaciation times of longer than 5000 years compared to more recently deglaciated areas. Thus far, members of Dothideomycetes, Leotiomycetes, and Arthoniomycetes have been restricted to the Placopsis specimens from areas with deglaciation times longer than 5000 years. Striking differences between the associated organisms of R. terebrata and H. lugubris have also been discovered. Thus, a species-specific basidiomycete, Tremella, was revealed for R. terebrata, as was a member of Capnodiales for H. lugubris. Our study provides further understanding of the complex terricolous lichen-associated mycobiome using the metabarcoding approach. It also illustrates the necessity to extend our knowledge of complex lichen symbiosis and further improve the coverage of microbial eukaryotes in DNA barcode libraries, including more extended sampling. Text Antarc* Antarctic Antarctica MDPI Open Access Publishing Antarctic Genes 14 5 1019
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Himantormia
Placopsis
Ramalina
lichen-associated eukaryotes
deglaciation time
spellingShingle Himantormia
Placopsis
Ramalina
lichen-associated eukaryotes
deglaciation time
Andreas Beck
Angélica Casanova-Katny
Julia Gerasimova
Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities
topic_facet Himantormia
Placopsis
Ramalina
lichen-associated eukaryotes
deglaciation time
description Lichens have developed numerous adaptations to optimise their survival under harsh abiotic stress, colonise different substrates, and reach substantial population sizes and high coverage in ice-free Antarctic areas, benefiting from a symbiotic lifestyle. As lichen thalli represent consortia with an unknown number of participants, it is important to know about the accessory organisms and their relationships with various environmental conditions. To this end, we analysed lichen-associated communities from Himantormia lugubris, Placopsis antarctica, P. contortuplicata, and Ramalina terebrata, collected from soils with differing deglaciation times, using a metabarcoding approach. In general, many more Ascomycete taxa are associated with the investigated lichens compared to Basidiomycota. Given our sampling, a consistently higher number of lichen-associated eukaryotes are estimated to be present in areas with deglaciation times of longer than 5000 years compared to more recently deglaciated areas. Thus far, members of Dothideomycetes, Leotiomycetes, and Arthoniomycetes have been restricted to the Placopsis specimens from areas with deglaciation times longer than 5000 years. Striking differences between the associated organisms of R. terebrata and H. lugubris have also been discovered. Thus, a species-specific basidiomycete, Tremella, was revealed for R. terebrata, as was a member of Capnodiales for H. lugubris. Our study provides further understanding of the complex terricolous lichen-associated mycobiome using the metabarcoding approach. It also illustrates the necessity to extend our knowledge of complex lichen symbiosis and further improve the coverage of microbial eukaryotes in DNA barcode libraries, including more extended sampling.
format Text
author Andreas Beck
Angélica Casanova-Katny
Julia Gerasimova
author_facet Andreas Beck
Angélica Casanova-Katny
Julia Gerasimova
author_sort Andreas Beck
title Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities
title_short Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities
title_full Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities
title_fullStr Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities
title_full_unstemmed Metabarcoding of Antarctic Lichens from Areas with Different Deglaciation Times Reveals a High Diversity of Lichen-Associated Communities
title_sort metabarcoding of antarctic lichens from areas with different deglaciation times reveals a high diversity of lichen-associated communities
publisher Multidisciplinary Digital Publishing Institute
publishDate 2023
url https://doi.org/10.3390/genes14051019
op_coverage agris
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_source Genes; Volume 14; Issue 5; Pages: 1019
op_relation Population and Evolutionary Genetics and Genomics
https://dx.doi.org/10.3390/genes14051019
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/genes14051019
container_title Genes
container_volume 14
container_issue 5
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