Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data

Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and gene...

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Published in:Genes
Main Authors: Claudio Cucini, Pietro P. Fanciulli, Francesco Frati, Peter Convey, Francesco Nardi, Antonio Carapelli
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2020
Subjects:
Online Access:https://doi.org/10.3390/genes12010044
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spelling ftmdpi:oai:mdpi.com:/2073-4425/12/1/44/ 2023-08-20T04:02:25+02:00 Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data Claudio Cucini Pietro P. Fanciulli Francesco Frati Peter Convey Francesco Nardi Antonio Carapelli agris 2020-12-30 application/pdf https://doi.org/10.3390/genes12010044 EN eng Multidisciplinary Digital Publishing Institute Animal Genetics and Genomics https://dx.doi.org/10.3390/genes12010044 https://creativecommons.org/licenses/by/4.0/ Genes; Volume 12; Issue 1; Pages: 44 springtail evolution mitochondrial DNA phylogeny Text 2020 ftmdpi https://doi.org/10.3390/genes12010044 2023-08-01T00:46:50Z Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and genetic approaches (singly or in combination) to assess the evolutionary relationships of major lineages in the group, no consensus has been reached. Several mitogenome sequences have been published for key taxa of the class (and their number is increasing rapidly). Here, we describe two new Antarctic Collembola mitogenomes and compare all complete or semi-complete springtail mitogenome sequences available on GenBank in terms of both gene order and DNA sequence analyses in a genome evolution and molecular phylogenetic framework. With minor exceptions, we confirm the monophyly of Poduromorpha and Symphypleona sensu stricto (the latter placed at the most basal position in the springtail phylogenetic tree), whereas monophyly of Neelipleona and Entomobryomorpha is only supported when a handful of critical taxa in these two lineages are excluded. Finally, we review gene order models observed in the class, as well as the overall mitochondrial nucleotide composition. Text Antarc* Antarctic Springtail MDPI Open Access Publishing Antarctic Genes 12 1 44
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic springtail
evolution
mitochondrial DNA
phylogeny
spellingShingle springtail
evolution
mitochondrial DNA
phylogeny
Claudio Cucini
Pietro P. Fanciulli
Francesco Frati
Peter Convey
Francesco Nardi
Antonio Carapelli
Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
topic_facet springtail
evolution
mitochondrial DNA
phylogeny
description Collembola are an ancient and early diverging lineage of basal hexapods that occur in virtually all terrestrial habitats on Earth. Phylogenetic relationships between the different orders of Collembola are fiercely debated. Despite a range of studies and the application of both morphological and genetic approaches (singly or in combination) to assess the evolutionary relationships of major lineages in the group, no consensus has been reached. Several mitogenome sequences have been published for key taxa of the class (and their number is increasing rapidly). Here, we describe two new Antarctic Collembola mitogenomes and compare all complete or semi-complete springtail mitogenome sequences available on GenBank in terms of both gene order and DNA sequence analyses in a genome evolution and molecular phylogenetic framework. With minor exceptions, we confirm the monophyly of Poduromorpha and Symphypleona sensu stricto (the latter placed at the most basal position in the springtail phylogenetic tree), whereas monophyly of Neelipleona and Entomobryomorpha is only supported when a handful of critical taxa in these two lineages are excluded. Finally, we review gene order models observed in the class, as well as the overall mitochondrial nucleotide composition.
format Text
author Claudio Cucini
Pietro P. Fanciulli
Francesco Frati
Peter Convey
Francesco Nardi
Antonio Carapelli
author_facet Claudio Cucini
Pietro P. Fanciulli
Francesco Frati
Peter Convey
Francesco Nardi
Antonio Carapelli
author_sort Claudio Cucini
title Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_short Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_full Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_fullStr Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_full_unstemmed Re-Evaluating the Internal Phylogenetic Relationships of Collembola by Means of Mitogenome Data
title_sort re-evaluating the internal phylogenetic relationships of collembola by means of mitogenome data
publisher Multidisciplinary Digital Publishing Institute
publishDate 2020
url https://doi.org/10.3390/genes12010044
op_coverage agris
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Springtail
genre_facet Antarc*
Antarctic
Springtail
op_source Genes; Volume 12; Issue 1; Pages: 44
op_relation Animal Genetics and Genomics
https://dx.doi.org/10.3390/genes12010044
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/genes12010044
container_title Genes
container_volume 12
container_issue 1
container_start_page 44
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