Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles

A moderate yield of a purified enzyme can be achieved by using the simple technique of reverse micellar extraction (RME). RME is a liquid–liquid extraction method that uses a surfactant and an organic solvent to extract biomolecules. Instead of traditional chromatographic purification methods, which...

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Published in:Catalysts
Main Authors: Fatin Nur Fauzi Ana Abd. Jalil, Raja Noor Zaliha Raja Abd. Rahman, Abu Bakar Salleh, Mohd Shukuri Mohamad Ali
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2018
Subjects:
Online Access:https://doi.org/10.3390/catal8070289
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author Fatin Nur Fauzi Ana Abd. Jalil
Raja Noor Zaliha Raja Abd. Rahman
Abu Bakar Salleh
Mohd Shukuri Mohamad Ali
author_facet Fatin Nur Fauzi Ana Abd. Jalil
Raja Noor Zaliha Raja Abd. Rahman
Abu Bakar Salleh
Mohd Shukuri Mohamad Ali
author_sort Fatin Nur Fauzi Ana Abd. Jalil
collection MDPI Open Access Publishing
container_issue 7
container_start_page 289
container_title Catalysts
container_volume 8
description A moderate yield of a purified enzyme can be achieved by using the simple technique of reverse micellar extraction (RME). RME is a liquid–liquid extraction method that uses a surfactant and an organic solvent to extract biomolecules. Instead of traditional chromatographic purification methods, which are tedious and expensive, RME using the nonionic surfactant Triton X-100 and toluene is used as an alternative purification technique to purify a recombinant cold-adapted lipase, AMS8. Various process parameters were optimized to maximize the activity recovery of the AMS8 lipase. The optimal conditions were found to be 50 mM sodium phosphate buffer, pH 7, 0.125 M NaCl, and 0.07 M Triton X-100 in toluene at 10 °C. Approximately 56% of the lipase activity was successfully recovered. Structural analysis of the lipase in a reverse micelle (RM) was performed using an in silico approach. The predicted model of AMS8 lipase was simulated in the Triton X-100/toluene reverse micelles from 5 to 40 °C. The lid 2 was slightly opened at 10 °C. However, the secondary structure of AMS8 was most affected in the non-catalytic domain compared to the catalytic domain, with an increased coil conformation. These results suggest that an AMS8 lipase can be extracted using Triton X-100/water/toluene micelles at low temperature. This RME approach will be an important tool for the downstream processing of recombinant cold-adapted lipases.
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genre Antarc*
Antarctic
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op_doi https://doi.org/10.3390/catal8070289
op_relation Catalytic Materials
https://dx.doi.org/10.3390/catal8070289
op_rights https://creativecommons.org/licenses/by/4.0/
op_source Catalysts; Volume 8; Issue 7; Pages: 289
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spelling ftmdpi:oai:mdpi.com:/2073-4344/8/7/289/ 2025-01-16T19:23:37+00:00 Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles Fatin Nur Fauzi Ana Abd. Jalil Raja Noor Zaliha Raja Abd. Rahman Abu Bakar Salleh Mohd Shukuri Mohamad Ali 2018-07-18 application/pdf https://doi.org/10.3390/catal8070289 EN eng Multidisciplinary Digital Publishing Institute Catalytic Materials https://dx.doi.org/10.3390/catal8070289 https://creativecommons.org/licenses/by/4.0/ Catalysts; Volume 8; Issue 7; Pages: 289 reverse micellar extraction cold-adapted lipase Triton X-100 molecular dynamics simulations Text 2018 ftmdpi https://doi.org/10.3390/catal8070289 2023-07-31T21:37:56Z A moderate yield of a purified enzyme can be achieved by using the simple technique of reverse micellar extraction (RME). RME is a liquid–liquid extraction method that uses a surfactant and an organic solvent to extract biomolecules. Instead of traditional chromatographic purification methods, which are tedious and expensive, RME using the nonionic surfactant Triton X-100 and toluene is used as an alternative purification technique to purify a recombinant cold-adapted lipase, AMS8. Various process parameters were optimized to maximize the activity recovery of the AMS8 lipase. The optimal conditions were found to be 50 mM sodium phosphate buffer, pH 7, 0.125 M NaCl, and 0.07 M Triton X-100 in toluene at 10 °C. Approximately 56% of the lipase activity was successfully recovered. Structural analysis of the lipase in a reverse micelle (RM) was performed using an in silico approach. The predicted model of AMS8 lipase was simulated in the Triton X-100/toluene reverse micelles from 5 to 40 °C. The lid 2 was slightly opened at 10 °C. However, the secondary structure of AMS8 was most affected in the non-catalytic domain compared to the catalytic domain, with an increased coil conformation. These results suggest that an AMS8 lipase can be extracted using Triton X-100/water/toluene micelles at low temperature. This RME approach will be an important tool for the downstream processing of recombinant cold-adapted lipases. Text Antarc* Antarctic MDPI Open Access Publishing Antarctic Triton ENVELOPE(-55.615,-55.615,49.517,49.517) Catalysts 8 7 289
spellingShingle reverse micellar extraction
cold-adapted lipase
Triton X-100
molecular dynamics simulations
Fatin Nur Fauzi Ana Abd. Jalil
Raja Noor Zaliha Raja Abd. Rahman
Abu Bakar Salleh
Mohd Shukuri Mohamad Ali
Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles
title Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles
title_full Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles
title_fullStr Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles
title_full_unstemmed Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles
title_short Optimization and in Silico Analysis of a Cold-Adapted Lipase from an Antarctic Pseudomonas sp. Strain AMS8 Reaction in Triton X-100 Reverse Micelles
title_sort optimization and in silico analysis of a cold-adapted lipase from an antarctic pseudomonas sp. strain ams8 reaction in triton x-100 reverse micelles
topic reverse micellar extraction
cold-adapted lipase
Triton X-100
molecular dynamics simulations
topic_facet reverse micellar extraction
cold-adapted lipase
Triton X-100
molecular dynamics simulations
url https://doi.org/10.3390/catal8070289