Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden

A novel, 10 kb RNA virus—tentatively named ‘Abisko virus’—was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in norther...

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Published in:Viruses
Main Authors: Joachim De Miranda, Harald Hedman, Piero Onorati, Jörg Stephan, Olof Karlberg, Helena Bylund, Olle Terenius
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2017
Subjects:
Online Access:https://doi.org/10.3390/v9080214
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author Joachim De Miranda
Harald Hedman
Piero Onorati
Jörg Stephan
Olof Karlberg
Helena Bylund
Olle Terenius
author_facet Joachim De Miranda
Harald Hedman
Piero Onorati
Jörg Stephan
Olof Karlberg
Helena Bylund
Olle Terenius
author_sort Joachim De Miranda
collection MDPI Open Access Publishing
container_issue 8
container_start_page 214
container_title Viruses
container_volume 9
description A novel, 10 kb RNA virus—tentatively named ‘Abisko virus’—was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in northern Fennoscandia. Abisko virus has a genome organization similar to that of the insect-infecting negeviruses, but phylogenetic and compositional bias analyses also reveal strong affiliations with plant-infecting viruses, such that both the primary host origin and taxonomic identity of the virus remain in doubt. In an extensive set of larval, pupal, and adult autumnal moth and winter moth (Operophtera brumata) outbreak samples, the virus was only detected in a few adult E. autumnata moths as well as the single larval transcriptome. The Abisko virus is therefore unlikely to be a factor in the Fennoscandia geometrid population dynamics.
format Text
genre Abisko
Fennoscandia
genre_facet Abisko
Fennoscandia
geographic Abisko
geographic_facet Abisko
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institution Open Polar
language English
long_lat ENVELOPE(18.829,18.829,68.349,68.349)
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op_coverage agris
op_doi https://doi.org/10.3390/v9080214
op_relation Insect Viruses
https://dx.doi.org/10.3390/v9080214
op_rights https://creativecommons.org/licenses/by/4.0/
op_source Viruses; Volume 9; Issue 8; Pages: 214
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publisher Multidisciplinary Digital Publishing Institute
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spelling ftmdpi:oai:mdpi.com:/1999-4915/9/8/214/ 2025-01-16T18:31:22+00:00 Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden Joachim De Miranda Harald Hedman Piero Onorati Jörg Stephan Olof Karlberg Helena Bylund Olle Terenius agris 2017-08-08 application/pdf https://doi.org/10.3390/v9080214 EN eng Multidisciplinary Digital Publishing Institute Insect Viruses https://dx.doi.org/10.3390/v9080214 https://creativecommons.org/licenses/by/4.0/ Viruses; Volume 9; Issue 8; Pages: 214 Epirrita autumnata autumnal moth Abisko virus negevirus Operophtera brumata outbreak mortality Text 2017 ftmdpi https://doi.org/10.3390/v9080214 2023-07-31T21:11:29Z A novel, 10 kb RNA virus—tentatively named ‘Abisko virus’—was discovered in the transcriptome data of a diseased autumnal moth (Epirrita autumnata) larva, as part of a search for the possible causes of the cyclical nature and mortality associated with geometrid moth dynamics and outbreaks in northern Fennoscandia. Abisko virus has a genome organization similar to that of the insect-infecting negeviruses, but phylogenetic and compositional bias analyses also reveal strong affiliations with plant-infecting viruses, such that both the primary host origin and taxonomic identity of the virus remain in doubt. In an extensive set of larval, pupal, and adult autumnal moth and winter moth (Operophtera brumata) outbreak samples, the virus was only detected in a few adult E. autumnata moths as well as the single larval transcriptome. The Abisko virus is therefore unlikely to be a factor in the Fennoscandia geometrid population dynamics. Text Abisko Fennoscandia MDPI Open Access Publishing Abisko ENVELOPE(18.829,18.829,68.349,68.349) Viruses 9 8 214
spellingShingle Epirrita autumnata
autumnal moth
Abisko virus
negevirus
Operophtera brumata
outbreak mortality
Joachim De Miranda
Harald Hedman
Piero Onorati
Jörg Stephan
Olof Karlberg
Helena Bylund
Olle Terenius
Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_full Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_fullStr Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_full_unstemmed Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_short Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden
title_sort characterization of a novel rna virus discovered in the autumnal moth epirrita autumnata in sweden
topic Epirrita autumnata
autumnal moth
Abisko virus
negevirus
Operophtera brumata
outbreak mortality
topic_facet Epirrita autumnata
autumnal moth
Abisko virus
negevirus
Operophtera brumata
outbreak mortality
url https://doi.org/10.3390/v9080214