Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica

Lake Vostok is the deepest lake of Antarctica but has poor accessibility for study due to a thick glacial cover, however, water samples of this lake have become available for study just recently. Previously, only the microbiome of the ice cover samples was characterized. Here we report results of ba...

Full description

Bibliographic Details
Published in:International Journal of Environmental Research and Public Health
Main Authors: Ekaterina Y. Epova, Alexei B. Shevelev, Ramazan M. Akbayev, Yulia K. Biryukova, Marina V. Zylkova, Elena S. Bogdanova, Marina A. Guseva, Yaroslav Y. Tynio, Vladislav V. Egorov
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2022
Subjects:
Online Access:https://doi.org/10.3390/ijerph19074025
id ftmdpi:oai:mdpi.com:/1660-4601/19/7/4025/
record_format openpolar
spelling ftmdpi:oai:mdpi.com:/1660-4601/19/7/4025/ 2023-08-20T04:00:30+02:00 Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica Ekaterina Y. Epova Alexei B. Shevelev Ramazan M. Akbayev Yulia K. Biryukova Marina V. Zylkova Elena S. Bogdanova Marina A. Guseva Yaroslav Y. Tynio Vladislav V. Egorov agris 2022-03-29 application/pdf https://doi.org/10.3390/ijerph19074025 EN eng Multidisciplinary Digital Publishing Institute https://dx.doi.org/10.3390/ijerph19074025 https://creativecommons.org/licenses/by/4.0/ International Journal of Environmental Research and Public Health; Volume 19; Issue 7; Pages: 4025 Antarctica lake fresh water microbiota 16S rDNA chemoorganotrophs Microbacterium testaceum Microbacterium trichothecenolyticum Brevundimonas diminuta Sphingomonas oligophenolica Sphingomonas Sphingobium limneticum Dendryphion Cladosporium fusiforme Text 2022 ftmdpi https://doi.org/10.3390/ijerph19074025 2023-08-01T04:35:57Z Lake Vostok is the deepest lake of Antarctica but has poor accessibility for study due to a thick glacial cover, however, water samples of this lake have become available for study just recently. Previously, only the microbiome of the ice cover samples was characterized. Here we report results of bacteriological seeding with subsequent identification of the heterotrophic microorganisms (bacteria and micellar fungi) present by 16S rDNA sequencing as well as results of a direct molecular study of the water microbiome. Surprisingly, the data obtained gave evidence of a predominant occurrence of common chemoorganotrophs that were rather psychrotolerant than psychrophilic. We isolated and described strains belonging to eight heterotrophic microbial species able to grow in a rich medium: six bacterial strains belonging to the species Microbacterium testaceum and Microbacterium trichothecenolyticum, Brevundimonas diminuta, Sphingomonas oligophenolica, Sphingomonas sp. and Sphingobium limneticum; and two fungal strains belonging to Dendryphion sp. and Cladosporium fusiforme. Direct study of 16S rDNA purified water samples confirmed the predominance of the Brevundimonas, Microbacterium, Bradyrhizobium, and Bacillus (Bacillus cereus) genera. Text Antarc* Antarctica MDPI Open Access Publishing Lake Vostok ENVELOPE(106.000,106.000,-77.500,-77.500) International Journal of Environmental Research and Public Health 19 7 4025
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Antarctica
lake
fresh water
microbiota
16S rDNA
chemoorganotrophs
Microbacterium testaceum
Microbacterium trichothecenolyticum
Brevundimonas diminuta
Sphingomonas oligophenolica
Sphingomonas
Sphingobium limneticum
Dendryphion
Cladosporium fusiforme
spellingShingle Antarctica
lake
fresh water
microbiota
16S rDNA
chemoorganotrophs
Microbacterium testaceum
Microbacterium trichothecenolyticum
Brevundimonas diminuta
Sphingomonas oligophenolica
Sphingomonas
Sphingobium limneticum
Dendryphion
Cladosporium fusiforme
Ekaterina Y. Epova
Alexei B. Shevelev
Ramazan M. Akbayev
Yulia K. Biryukova
Marina V. Zylkova
Elena S. Bogdanova
Marina A. Guseva
Yaroslav Y. Tynio
Vladislav V. Egorov
Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica
topic_facet Antarctica
lake
fresh water
microbiota
16S rDNA
chemoorganotrophs
Microbacterium testaceum
Microbacterium trichothecenolyticum
Brevundimonas diminuta
Sphingomonas oligophenolica
Sphingomonas
Sphingobium limneticum
Dendryphion
Cladosporium fusiforme
description Lake Vostok is the deepest lake of Antarctica but has poor accessibility for study due to a thick glacial cover, however, water samples of this lake have become available for study just recently. Previously, only the microbiome of the ice cover samples was characterized. Here we report results of bacteriological seeding with subsequent identification of the heterotrophic microorganisms (bacteria and micellar fungi) present by 16S rDNA sequencing as well as results of a direct molecular study of the water microbiome. Surprisingly, the data obtained gave evidence of a predominant occurrence of common chemoorganotrophs that were rather psychrotolerant than psychrophilic. We isolated and described strains belonging to eight heterotrophic microbial species able to grow in a rich medium: six bacterial strains belonging to the species Microbacterium testaceum and Microbacterium trichothecenolyticum, Brevundimonas diminuta, Sphingomonas oligophenolica, Sphingomonas sp. and Sphingobium limneticum; and two fungal strains belonging to Dendryphion sp. and Cladosporium fusiforme. Direct study of 16S rDNA purified water samples confirmed the predominance of the Brevundimonas, Microbacterium, Bradyrhizobium, and Bacillus (Bacillus cereus) genera.
format Text
author Ekaterina Y. Epova
Alexei B. Shevelev
Ramazan M. Akbayev
Yulia K. Biryukova
Marina V. Zylkova
Elena S. Bogdanova
Marina A. Guseva
Yaroslav Y. Tynio
Vladislav V. Egorov
author_facet Ekaterina Y. Epova
Alexei B. Shevelev
Ramazan M. Akbayev
Yulia K. Biryukova
Marina V. Zylkova
Elena S. Bogdanova
Marina A. Guseva
Yaroslav Y. Tynio
Vladislav V. Egorov
author_sort Ekaterina Y. Epova
title Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica
title_short Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica
title_full Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica
title_fullStr Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica
title_full_unstemmed Heterotrophic Microbiota from the Oligotrophic Waters of Lake Vostok, Antarctica
title_sort heterotrophic microbiota from the oligotrophic waters of lake vostok, antarctica
publisher Multidisciplinary Digital Publishing Institute
publishDate 2022
url https://doi.org/10.3390/ijerph19074025
op_coverage agris
long_lat ENVELOPE(106.000,106.000,-77.500,-77.500)
geographic Lake Vostok
geographic_facet Lake Vostok
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_source International Journal of Environmental Research and Public Health; Volume 19; Issue 7; Pages: 4025
op_relation https://dx.doi.org/10.3390/ijerph19074025
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/ijerph19074025
container_title International Journal of Environmental Research and Public Health
container_volume 19
container_issue 7
container_start_page 4025
_version_ 1774718575488008192