Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides

The neuropeptides involved in the regulation of reproduction in the Pacific oyster (Crassostrea gigas) are quite diverse. To investigate this diversity, a transcriptomic survey of the visceral ganglia (VG) was carried out over an annual reproductive cycle. RNA-seq data from 26 samples corresponding...

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Published in:Marine Drugs
Main Authors: Emilie Réalis-Doyelle, Julie Schwartz, Cédric Cabau, Lorane Le Franc, Benoit Bernay, Guillaume Rivière, Christophe Klopp, Pascal Favrel
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2021
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Online Access:https://doi.org/10.3390/md19080452
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spelling ftmdpi:oai:mdpi.com:/1660-3397/19/8/452/ 2023-08-20T04:06:02+02:00 Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides Emilie Réalis-Doyelle Julie Schwartz Cédric Cabau Lorane Le Franc Benoit Bernay Guillaume Rivière Christophe Klopp Pascal Favrel agris 2021-08-07 application/pdf https://doi.org/10.3390/md19080452 EN eng Multidisciplinary Digital Publishing Institute https://dx.doi.org/10.3390/md19080452 https://creativecommons.org/licenses/by/4.0/ Marine Drugs; Volume 19; Issue 8; Pages: 452 nervous system transcriptome neuropeptides reproduction Text 2021 ftmdpi https://doi.org/10.3390/md19080452 2023-08-01T02:23:08Z The neuropeptides involved in the regulation of reproduction in the Pacific oyster (Crassostrea gigas) are quite diverse. To investigate this diversity, a transcriptomic survey of the visceral ganglia (VG) was carried out over an annual reproductive cycle. RNA-seq data from 26 samples corresponding to VG at different stages of reproduction were de novo assembled to generate a specific reference transcriptome of the oyster nervous system and used to identify differentially expressed transcripts. Transcriptome mining led to the identification of novel neuropeptide precursors (NPPs) related to the bilaterian Eclosion Hormone (EH), crustacean female sex hormone/Interleukin 17, Nesfatin, neuroparsin/IGFBP, prokineticins, and urotensin I; to the protostome GNQQN, pleurin, prohormones 3 and 4, prothoracotropic hormones (PTTH), and QSamide/PXXXamide; to the lophotrochozoan CCWamide, CLCCY, HFAamide, and LXRX; and to the mollusk-specific NPPs CCCGS, clionin, FYFY, GNamide, GRWRN, GSWN, GWE, IWMPxxGYxx, LXRYamide, RTLFamide, SLRFamide, and WGAGamide. Among the complete repertoire of NPPs, no sex-biased expression was observed. However, 25 NPPs displayed reproduction stage-specific expression, supporting their involvement in the control of gametogenesis or associated metabolisms. Text Crassostrea gigas Pacific oyster MDPI Open Access Publishing Pacific Marine Drugs 19 8 452
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic nervous system
transcriptome
neuropeptides
reproduction
spellingShingle nervous system
transcriptome
neuropeptides
reproduction
Emilie Réalis-Doyelle
Julie Schwartz
Cédric Cabau
Lorane Le Franc
Benoit Bernay
Guillaume Rivière
Christophe Klopp
Pascal Favrel
Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
topic_facet nervous system
transcriptome
neuropeptides
reproduction
description The neuropeptides involved in the regulation of reproduction in the Pacific oyster (Crassostrea gigas) are quite diverse. To investigate this diversity, a transcriptomic survey of the visceral ganglia (VG) was carried out over an annual reproductive cycle. RNA-seq data from 26 samples corresponding to VG at different stages of reproduction were de novo assembled to generate a specific reference transcriptome of the oyster nervous system and used to identify differentially expressed transcripts. Transcriptome mining led to the identification of novel neuropeptide precursors (NPPs) related to the bilaterian Eclosion Hormone (EH), crustacean female sex hormone/Interleukin 17, Nesfatin, neuroparsin/IGFBP, prokineticins, and urotensin I; to the protostome GNQQN, pleurin, prohormones 3 and 4, prothoracotropic hormones (PTTH), and QSamide/PXXXamide; to the lophotrochozoan CCWamide, CLCCY, HFAamide, and LXRX; and to the mollusk-specific NPPs CCCGS, clionin, FYFY, GNamide, GRWRN, GSWN, GWE, IWMPxxGYxx, LXRYamide, RTLFamide, SLRFamide, and WGAGamide. Among the complete repertoire of NPPs, no sex-biased expression was observed. However, 25 NPPs displayed reproduction stage-specific expression, supporting their involvement in the control of gametogenesis or associated metabolisms.
format Text
author Emilie Réalis-Doyelle
Julie Schwartz
Cédric Cabau
Lorane Le Franc
Benoit Bernay
Guillaume Rivière
Christophe Klopp
Pascal Favrel
author_facet Emilie Réalis-Doyelle
Julie Schwartz
Cédric Cabau
Lorane Le Franc
Benoit Bernay
Guillaume Rivière
Christophe Klopp
Pascal Favrel
author_sort Emilie Réalis-Doyelle
title Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_short Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_full Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_fullStr Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_full_unstemmed Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_sort transcriptome profiling of the pacific oyster crassostrea gigas visceral ganglia over a reproduction cycle identifies novel regulatory peptides
publisher Multidisciplinary Digital Publishing Institute
publishDate 2021
url https://doi.org/10.3390/md19080452
op_coverage agris
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_source Marine Drugs; Volume 19; Issue 8; Pages: 452
op_relation https://dx.doi.org/10.3390/md19080452
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/md19080452
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