A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178

l-tert-leucine and its derivatives are useful as pharmaceutical active ingredients, in which leucine dehydrogenase (LeuDH) is the key enzyme in their enzymatic conversions. In the present study, a novel cold-adapted LeuDH, psleudh, was cloned from psychrotrophic bacteria Pseudoalteromonas sp. ANT178...

Full description

Bibliographic Details
Published in:Marine Drugs
Main Authors: Yatong Wang, Yanhua Hou, Yifan Wang, Lu Zheng, Xianlei Xu, Kang Pan, Rongqi Li, Quanfu Wang
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2018
Subjects:
Online Access:https://doi.org/10.3390/md16100359
id ftmdpi:oai:mdpi.com:/1660-3397/16/10/359/
record_format openpolar
spelling ftmdpi:oai:mdpi.com:/1660-3397/16/10/359/ 2023-08-20T04:00:18+02:00 A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178 Yatong Wang Yanhua Hou Yifan Wang Lu Zheng Xianlei Xu Kang Pan Rongqi Li Quanfu Wang agris 2018-10-01 application/pdf https://doi.org/10.3390/md16100359 EN eng Multidisciplinary Digital Publishing Institute https://dx.doi.org/10.3390/md16100359 https://creativecommons.org/licenses/by/4.0/ Marine Drugs; Volume 16; Issue 10; Pages: 359 leucine dehydrogenase cold-adapted Antarctic bacterium sea-ice homology modeling Text 2018 ftmdpi https://doi.org/10.3390/md16100359 2023-07-31T21:45:29Z l-tert-leucine and its derivatives are useful as pharmaceutical active ingredients, in which leucine dehydrogenase (LeuDH) is the key enzyme in their enzymatic conversions. In the present study, a novel cold-adapted LeuDH, psleudh, was cloned from psychrotrophic bacteria Pseudoalteromonas sp. ANT178, which was isolated from Antarctic sea-ice. Bioinformatics analysis of the gene psleudh showed that the gene was 1209 bp in length and coded for a 42.6 kDa protein containing 402 amino acids. PsLeuDH had conserved Phe binding site and NAD+ binding site, and belonged to a member of the Glu/Leu/Phe/Val dehydrogenase family. Homology modeling analysis results suggested that PsLeuDH exhibited more glycine residues, reduced proline residues, and arginine residues, which might be responsible for its catalytic efficiency at low temperature. The recombinant PsLeuDH (rPsLeuDH) was purified a major band with the high specific activity of 275.13 U/mg using a Ni-NTA affinity chromatography. The optimum temperature and pH for rPsLeuDH activity were 30 °C and pH 9.0, respectively. Importantly, rPsLeuDH retained at least 40% of its maximum activity even at 0 °C. Moreover, the activity of rPsLeuDH was the highest in the presence of 2.0 M NaCl. Substrate specificity and kinetic studies of rPsLeuDH demonstrated that l-leucine was the most suitable substrate, and the catalytic activity at low temperatures was ensured by maintaining a high kcat value. The results of the current study would provide insight into Antarctic sea-ice bacterium LeuDH, and the unique properties of rPsLeuDH make it a promising candidate as a biocatalyst in medical and pharmaceutical industries. Text Antarc* Antarctic Sea ice MDPI Open Access Publishing Antarctic Marine Drugs 16 10 359
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic leucine dehydrogenase
cold-adapted
Antarctic bacterium
sea-ice
homology modeling
spellingShingle leucine dehydrogenase
cold-adapted
Antarctic bacterium
sea-ice
homology modeling
Yatong Wang
Yanhua Hou
Yifan Wang
Lu Zheng
Xianlei Xu
Kang Pan
Rongqi Li
Quanfu Wang
A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
topic_facet leucine dehydrogenase
cold-adapted
Antarctic bacterium
sea-ice
homology modeling
description l-tert-leucine and its derivatives are useful as pharmaceutical active ingredients, in which leucine dehydrogenase (LeuDH) is the key enzyme in their enzymatic conversions. In the present study, a novel cold-adapted LeuDH, psleudh, was cloned from psychrotrophic bacteria Pseudoalteromonas sp. ANT178, which was isolated from Antarctic sea-ice. Bioinformatics analysis of the gene psleudh showed that the gene was 1209 bp in length and coded for a 42.6 kDa protein containing 402 amino acids. PsLeuDH had conserved Phe binding site and NAD+ binding site, and belonged to a member of the Glu/Leu/Phe/Val dehydrogenase family. Homology modeling analysis results suggested that PsLeuDH exhibited more glycine residues, reduced proline residues, and arginine residues, which might be responsible for its catalytic efficiency at low temperature. The recombinant PsLeuDH (rPsLeuDH) was purified a major band with the high specific activity of 275.13 U/mg using a Ni-NTA affinity chromatography. The optimum temperature and pH for rPsLeuDH activity were 30 °C and pH 9.0, respectively. Importantly, rPsLeuDH retained at least 40% of its maximum activity even at 0 °C. Moreover, the activity of rPsLeuDH was the highest in the presence of 2.0 M NaCl. Substrate specificity and kinetic studies of rPsLeuDH demonstrated that l-leucine was the most suitable substrate, and the catalytic activity at low temperatures was ensured by maintaining a high kcat value. The results of the current study would provide insight into Antarctic sea-ice bacterium LeuDH, and the unique properties of rPsLeuDH make it a promising candidate as a biocatalyst in medical and pharmaceutical industries.
format Text
author Yatong Wang
Yanhua Hou
Yifan Wang
Lu Zheng
Xianlei Xu
Kang Pan
Rongqi Li
Quanfu Wang
author_facet Yatong Wang
Yanhua Hou
Yifan Wang
Lu Zheng
Xianlei Xu
Kang Pan
Rongqi Li
Quanfu Wang
author_sort Yatong Wang
title A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
title_short A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
title_full A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
title_fullStr A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
title_full_unstemmed A Novel Cold-Adapted Leucine Dehydrogenase from Antarctic Sea-Ice Bacterium Pseudoalteromonas sp. ANT178
title_sort novel cold-adapted leucine dehydrogenase from antarctic sea-ice bacterium pseudoalteromonas sp. ant178
publisher Multidisciplinary Digital Publishing Institute
publishDate 2018
url https://doi.org/10.3390/md16100359
op_coverage agris
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Sea ice
genre_facet Antarc*
Antarctic
Sea ice
op_source Marine Drugs; Volume 16; Issue 10; Pages: 359
op_relation https://dx.doi.org/10.3390/md16100359
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/md16100359
container_title Marine Drugs
container_volume 16
container_issue 10
container_start_page 359
_version_ 1774717440957087744