The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
Organellar genomes of bryophytes are poorly represented with chloroplast genomes of only four mosses, four liverworts and two hornworts having been sequenced and annotated. Moreover, while Antarctic vegetation is dominated by the bryophytes, there are few reports on the plastid genomes for the Antar...
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ftmdpi:oai:mdpi.com:/1422-0067/19/3/709/ 2023-08-20T04:02:31+02:00 The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske Mira Park Hyun Park Hyoungseok Lee Byeong-ha Lee Jungeun Lee agris 2018-03-01 application/pdf https://doi.org/10.3390/ijms19030709 EN eng Multidisciplinary Digital Publishing Institute Molecular Plant Sciences https://dx.doi.org/10.3390/ijms19030709 https://creativecommons.org/licenses/by/4.0/ International Journal of Molecular Sciences; Volume 19; Issue 3; Pages: 709 Sanionia uncinata chloroplast genome Antarctic bryophyte moss plastome Text 2018 ftmdpi https://doi.org/10.3390/ijms19030709 2023-07-31T21:24:48Z Organellar genomes of bryophytes are poorly represented with chloroplast genomes of only four mosses, four liverworts and two hornworts having been sequenced and annotated. Moreover, while Antarctic vegetation is dominated by the bryophytes, there are few reports on the plastid genomes for the Antarctic bryophytes. Sanionia uncinata (Hedw.) Loeske is one of the most dominant moss species in the maritime Antarctic. It has been researched as an important marker for ecological studies and as an extremophile plant for studies on stress tolerance. Here, we report the complete plastome sequence of S. uncinata, which can be exploited in comparative studies to identify the lineage-specific divergence across different species. The complete plastome of S. uncinata is 124,374 bp in length with a typical quadripartite structure of 114 unique genes including 82 unique protein-coding genes, 37 tRNA genes and four rRNA genes. However, two genes encoding the α subunit of RNA polymerase (rpoA) and encoding the cytochrome b6/f complex subunit VIII (petN) were absent. We could identify nuclear genes homologous to those genes, which suggests that rpoA and petN might have been relocated from the chloroplast genome to the nuclear genome. Text Antarc* Antarctic MDPI Open Access Publishing Antarctic The Antarctic International Journal of Molecular Sciences 19 3 709 |
institution |
Open Polar |
collection |
MDPI Open Access Publishing |
op_collection_id |
ftmdpi |
language |
English |
topic |
Sanionia uncinata chloroplast genome Antarctic bryophyte moss plastome |
spellingShingle |
Sanionia uncinata chloroplast genome Antarctic bryophyte moss plastome Mira Park Hyun Park Hyoungseok Lee Byeong-ha Lee Jungeun Lee The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske |
topic_facet |
Sanionia uncinata chloroplast genome Antarctic bryophyte moss plastome |
description |
Organellar genomes of bryophytes are poorly represented with chloroplast genomes of only four mosses, four liverworts and two hornworts having been sequenced and annotated. Moreover, while Antarctic vegetation is dominated by the bryophytes, there are few reports on the plastid genomes for the Antarctic bryophytes. Sanionia uncinata (Hedw.) Loeske is one of the most dominant moss species in the maritime Antarctic. It has been researched as an important marker for ecological studies and as an extremophile plant for studies on stress tolerance. Here, we report the complete plastome sequence of S. uncinata, which can be exploited in comparative studies to identify the lineage-specific divergence across different species. The complete plastome of S. uncinata is 124,374 bp in length with a typical quadripartite structure of 114 unique genes including 82 unique protein-coding genes, 37 tRNA genes and four rRNA genes. However, two genes encoding the α subunit of RNA polymerase (rpoA) and encoding the cytochrome b6/f complex subunit VIII (petN) were absent. We could identify nuclear genes homologous to those genes, which suggests that rpoA and petN might have been relocated from the chloroplast genome to the nuclear genome. |
format |
Text |
author |
Mira Park Hyun Park Hyoungseok Lee Byeong-ha Lee Jungeun Lee |
author_facet |
Mira Park Hyun Park Hyoungseok Lee Byeong-ha Lee Jungeun Lee |
author_sort |
Mira Park |
title |
The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske |
title_short |
The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske |
title_full |
The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske |
title_fullStr |
The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske |
title_full_unstemmed |
The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske |
title_sort |
complete plastome sequence of an antarctic bryophyte sanionia uncinata (hedw.) loeske |
publisher |
Multidisciplinary Digital Publishing Institute |
publishDate |
2018 |
url |
https://doi.org/10.3390/ijms19030709 |
op_coverage |
agris |
geographic |
Antarctic The Antarctic |
geographic_facet |
Antarctic The Antarctic |
genre |
Antarc* Antarctic |
genre_facet |
Antarc* Antarctic |
op_source |
International Journal of Molecular Sciences; Volume 19; Issue 3; Pages: 709 |
op_relation |
Molecular Plant Sciences https://dx.doi.org/10.3390/ijms19030709 |
op_rights |
https://creativecommons.org/licenses/by/4.0/ |
op_doi |
https://doi.org/10.3390/ijms19030709 |
container_title |
International Journal of Molecular Sciences |
container_volume |
19 |
container_issue |
3 |
container_start_page |
709 |
_version_ |
1774713019324956672 |