The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske

Organellar genomes of bryophytes are poorly represented with chloroplast genomes of only four mosses, four liverworts and two hornworts having been sequenced and annotated. Moreover, while Antarctic vegetation is dominated by the bryophytes, there are few reports on the plastid genomes for the Antar...

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Published in:International Journal of Molecular Sciences
Main Authors: Mira Park, Hyun Park, Hyoungseok Lee, Byeong-ha Lee, Jungeun Lee
Format: Text
Language:English
Published: Multidisciplinary Digital Publishing Institute 2018
Subjects:
Online Access:https://doi.org/10.3390/ijms19030709
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spelling ftmdpi:oai:mdpi.com:/1422-0067/19/3/709/ 2023-08-20T04:02:31+02:00 The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske Mira Park Hyun Park Hyoungseok Lee Byeong-ha Lee Jungeun Lee agris 2018-03-01 application/pdf https://doi.org/10.3390/ijms19030709 EN eng Multidisciplinary Digital Publishing Institute Molecular Plant Sciences https://dx.doi.org/10.3390/ijms19030709 https://creativecommons.org/licenses/by/4.0/ International Journal of Molecular Sciences; Volume 19; Issue 3; Pages: 709 Sanionia uncinata chloroplast genome Antarctic bryophyte moss plastome Text 2018 ftmdpi https://doi.org/10.3390/ijms19030709 2023-07-31T21:24:48Z Organellar genomes of bryophytes are poorly represented with chloroplast genomes of only four mosses, four liverworts and two hornworts having been sequenced and annotated. Moreover, while Antarctic vegetation is dominated by the bryophytes, there are few reports on the plastid genomes for the Antarctic bryophytes. Sanionia uncinata (Hedw.) Loeske is one of the most dominant moss species in the maritime Antarctic. It has been researched as an important marker for ecological studies and as an extremophile plant for studies on stress tolerance. Here, we report the complete plastome sequence of S. uncinata, which can be exploited in comparative studies to identify the lineage-specific divergence across different species. The complete plastome of S. uncinata is 124,374 bp in length with a typical quadripartite structure of 114 unique genes including 82 unique protein-coding genes, 37 tRNA genes and four rRNA genes. However, two genes encoding the α subunit of RNA polymerase (rpoA) and encoding the cytochrome b6/f complex subunit VIII (petN) were absent. We could identify nuclear genes homologous to those genes, which suggests that rpoA and petN might have been relocated from the chloroplast genome to the nuclear genome. Text Antarc* Antarctic MDPI Open Access Publishing Antarctic The Antarctic International Journal of Molecular Sciences 19 3 709
institution Open Polar
collection MDPI Open Access Publishing
op_collection_id ftmdpi
language English
topic Sanionia uncinata
chloroplast genome
Antarctic bryophyte
moss
plastome
spellingShingle Sanionia uncinata
chloroplast genome
Antarctic bryophyte
moss
plastome
Mira Park
Hyun Park
Hyoungseok Lee
Byeong-ha Lee
Jungeun Lee
The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
topic_facet Sanionia uncinata
chloroplast genome
Antarctic bryophyte
moss
plastome
description Organellar genomes of bryophytes are poorly represented with chloroplast genomes of only four mosses, four liverworts and two hornworts having been sequenced and annotated. Moreover, while Antarctic vegetation is dominated by the bryophytes, there are few reports on the plastid genomes for the Antarctic bryophytes. Sanionia uncinata (Hedw.) Loeske is one of the most dominant moss species in the maritime Antarctic. It has been researched as an important marker for ecological studies and as an extremophile plant for studies on stress tolerance. Here, we report the complete plastome sequence of S. uncinata, which can be exploited in comparative studies to identify the lineage-specific divergence across different species. The complete plastome of S. uncinata is 124,374 bp in length with a typical quadripartite structure of 114 unique genes including 82 unique protein-coding genes, 37 tRNA genes and four rRNA genes. However, two genes encoding the α subunit of RNA polymerase (rpoA) and encoding the cytochrome b6/f complex subunit VIII (petN) were absent. We could identify nuclear genes homologous to those genes, which suggests that rpoA and petN might have been relocated from the chloroplast genome to the nuclear genome.
format Text
author Mira Park
Hyun Park
Hyoungseok Lee
Byeong-ha Lee
Jungeun Lee
author_facet Mira Park
Hyun Park
Hyoungseok Lee
Byeong-ha Lee
Jungeun Lee
author_sort Mira Park
title The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
title_short The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
title_full The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
title_fullStr The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
title_full_unstemmed The Complete Plastome Sequence of an Antarctic Bryophyte Sanionia uncinata (Hedw.) Loeske
title_sort complete plastome sequence of an antarctic bryophyte sanionia uncinata (hedw.) loeske
publisher Multidisciplinary Digital Publishing Institute
publishDate 2018
url https://doi.org/10.3390/ijms19030709
op_coverage agris
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source International Journal of Molecular Sciences; Volume 19; Issue 3; Pages: 709
op_relation Molecular Plant Sciences
https://dx.doi.org/10.3390/ijms19030709
op_rights https://creativecommons.org/licenses/by/4.0/
op_doi https://doi.org/10.3390/ijms19030709
container_title International Journal of Molecular Sciences
container_volume 19
container_issue 3
container_start_page 709
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