Design and validation of a 63K genome-wide SNP-genotyping platform for caribou/reindeer (Rangifer tarandus)

• Main Authors: Carrier, Alexandra, Prunier, Julien, Poisson, William, Trottier-Lavoie, Mallorie, Gilbert, Isabelle, Cavedon, Maria, Pokharel, Kisun, Kantanen, Juha, Musiani, Marco, Côté, Steeve D., Albert, Vicky, Taillon, Joëlle, Bourret, Vincent, Droit, Arnaud, Robert, Claude
• Other Authors: orcid:0000-0002-4924-946X, orcid:0000-0001-6350-6373, 4100111010, 4100211610, Luonnonvarakeskus
• Format: Article in Journal/Newspaper
• Language: English
• Published: Springer Science and Business Media LLC
• Subjects: karibu; poro; perimä; SNP; caribou; reindeer; genome; single nucleotide polymorphisms; SNP chip; Rangifer tarandus; Genotyping; Next generation sequencing; Genomics; Canada; The ''Y''
• Online Access: https://jukuri.luke.fi/handle/10024/552326

Background Development of large single nucleotide polymorphism (SNP) arrays can make genomic data promptly available for conservation problematic. Medium and high-density panels can be designed with sufficient coverage to offer a genome-wide perspective and the generated genotypes can be used to ass...