Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry

© Author(s) 2017. Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which i...

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Published in:Geoscientific Model Development
Main Authors: Yakushev, Evgeniy V., Protsenko, Elizaveta A., Bruggeman, Jorn, Wallhead, Philip, Pakhomova, Svetlana V., Yakubov, Shamil Kh, Bellerby, Richard G.J., Couture, Raoul Marie
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Published: LSU Digital Commons 2017
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Online Access:https://digitalcommons.lsu.edu/biosci_pubs/2817
https://doi.org/10.5194/gmd-10-453-2017
https://digitalcommons.lsu.edu/context/biosci_pubs/article/3816/viewcontent/2817.pdf
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spelling ftlouisianastuir:oai:digitalcommons.lsu.edu:biosci_pubs-3816 2023-06-11T04:15:41+02:00 Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry Yakushev, Evgeniy V. Protsenko, Elizaveta A. Bruggeman, Jorn Wallhead, Philip Pakhomova, Svetlana V. Yakubov, Shamil Kh Bellerby, Richard G.J. Couture, Raoul Marie 2017-02-01T08:00:00Z application/pdf https://digitalcommons.lsu.edu/biosci_pubs/2817 https://doi.org/10.5194/gmd-10-453-2017 https://digitalcommons.lsu.edu/context/biosci_pubs/article/3816/viewcontent/2817.pdf unknown LSU Digital Commons https://digitalcommons.lsu.edu/biosci_pubs/2817 doi:10.5194/gmd-10-453-2017 https://digitalcommons.lsu.edu/context/biosci_pubs/article/3816/viewcontent/2817.pdf Faculty Publications text 2017 ftlouisianastuir https://doi.org/10.5194/gmd-10-453-2017 2023-05-28T18:20:04Z © Author(s) 2017. Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which in turn modulate the functioning of benthic and pelagic ecosystems. The redox state of the near-bottom layer in many regions can change with time, responding to the supply of organic matter, physical regime, and coastal discharge. We developed a model (BROM) to represent key biogeochemical processes in the water and sediments and to simulate changes occurring in the bottom boundary layer. BROM consists of a transport module (BROM-transport) and several biogeochemical modules that are fully compatible with the Framework for the Aquatic Biogeochemical Models, allowing independent coupling to hydrophysical models in 1-D, 2-D, or 3-D. We demonstrate that BROM is capable of simulating the seasonality in production and mineralization of organic matter as well as the mixing that leads to variations in redox conditions. BROM can be used for analyzing and interpreting data on sediment-water exchange, and for simulating the consequences of forcings such as climate change, external nutrient loading, ocean acidification, carbon storage leakage, and point-source metal pollution. Text Ocean acidification LSU Digital Commons (Louisiana State University) Geoscientific Model Development 10 1 453 482
institution Open Polar
collection LSU Digital Commons (Louisiana State University)
op_collection_id ftlouisianastuir
language unknown
description © Author(s) 2017. Interactions between seawater and benthic systems play an important role in global biogeochemical cycling. Benthic fluxes of some chemical elements (e.g., C, N, P, O, Si, Fe, Mn, S) alter the redox state and marine carbonate system (i.e., pH and carbonate saturation state), which in turn modulate the functioning of benthic and pelagic ecosystems. The redox state of the near-bottom layer in many regions can change with time, responding to the supply of organic matter, physical regime, and coastal discharge. We developed a model (BROM) to represent key biogeochemical processes in the water and sediments and to simulate changes occurring in the bottom boundary layer. BROM consists of a transport module (BROM-transport) and several biogeochemical modules that are fully compatible with the Framework for the Aquatic Biogeochemical Models, allowing independent coupling to hydrophysical models in 1-D, 2-D, or 3-D. We demonstrate that BROM is capable of simulating the seasonality in production and mineralization of organic matter as well as the mixing that leads to variations in redox conditions. BROM can be used for analyzing and interpreting data on sediment-water exchange, and for simulating the consequences of forcings such as climate change, external nutrient loading, ocean acidification, carbon storage leakage, and point-source metal pollution.
format Text
author Yakushev, Evgeniy V.
Protsenko, Elizaveta A.
Bruggeman, Jorn
Wallhead, Philip
Pakhomova, Svetlana V.
Yakubov, Shamil Kh
Bellerby, Richard G.J.
Couture, Raoul Marie
spellingShingle Yakushev, Evgeniy V.
Protsenko, Elizaveta A.
Bruggeman, Jorn
Wallhead, Philip
Pakhomova, Svetlana V.
Yakubov, Shamil Kh
Bellerby, Richard G.J.
Couture, Raoul Marie
Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
author_facet Yakushev, Evgeniy V.
Protsenko, Elizaveta A.
Bruggeman, Jorn
Wallhead, Philip
Pakhomova, Svetlana V.
Yakubov, Shamil Kh
Bellerby, Richard G.J.
Couture, Raoul Marie
author_sort Yakushev, Evgeniy V.
title Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
title_short Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
title_full Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
title_fullStr Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
title_full_unstemmed Bottom RedOx Model (BROM v.1.1): A coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
title_sort bottom redox model (brom v.1.1): a coupled benthic-pelagic model for simulation of water and sediment biogeochemistry
publisher LSU Digital Commons
publishDate 2017
url https://digitalcommons.lsu.edu/biosci_pubs/2817
https://doi.org/10.5194/gmd-10-453-2017
https://digitalcommons.lsu.edu/context/biosci_pubs/article/3816/viewcontent/2817.pdf
genre Ocean acidification
genre_facet Ocean acidification
op_source Faculty Publications
op_relation https://digitalcommons.lsu.edu/biosci_pubs/2817
doi:10.5194/gmd-10-453-2017
https://digitalcommons.lsu.edu/context/biosci_pubs/article/3816/viewcontent/2817.pdf
op_doi https://doi.org/10.5194/gmd-10-453-2017
container_title Geoscientific Model Development
container_volume 10
container_issue 1
container_start_page 453
op_container_end_page 482
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