The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.

To access publisher's full text version of this article, please click on the hyperlink in Additional Links field or click on the hyperlink at the top of the page marked Download Age-related hearing impairment (ARHI) is the most common sensory disorder in older adults. We conducted a genome-wide...

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Published in:Communications Biology
Main Authors: Ivarsdottir, Erna V, Holm, Hilma, Benonisdottir, Stefania, Olafsdottir, Thorhildur, Sveinbjornsson, Gardar, Thorleifsson, Gudmar, Eggertsson, Hannes P, Halldorsson, Gisli H, Hjorleifsson, Kristjan E, Melsted, Pall, Gylfason, Arnaldur, Arnadottir, Gudny A, Oddsson, Asmundur, Jensson, Brynjar O, Jonasdottir, Aslaug, Jonasdottir, Adalbjorg, Juliusdottir, Thorhildur, Stefansdottir, Lilja, Tragante, Vinicius, Halldorsson, Bjarni V, Petersen, Hannes, Thorgeirsson, Gudmundur, Thorsteinsdottir, Unnur, Sulem, Patrick, Hinriksdottir, Ingibjorg, Jonsdottir, Ingileif, Gudbjartsson, Daniel F, Stefansson, Kari
Other Authors: 1deCODE Genetics/Amgen, Reykjavik, Iceland. 2School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland. 3Department of Computing and Mathematical Sciences, California Institute of Technology, Pasadena, CA, USA. 4School of Technology, Reykjavik University, Reykjavik, Iceland. 5Faculty of Medicine, School of Health Sciences, University of Iceland, Reykjavik, Iceland. 6Akureyri Hospital, Akureyri, Iceland. 7Division of Cardiology, Department of Internal Medicine, Landspitali University Hospital, Reykjavik, Iceland. 8National Institute of Hearing and Speech in Iceland, Reykjavik, Iceland. 9Department of Immunology, Landspitali University Hospital, Reykjavik, Iceland. 10deCODE Genetics/Amgen, Reykjavik, Iceland. daniel.gudbjartsson@decode.is. 11School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland. daniel.gudbjartsson@decode.is. 12deCODE Genetics/Amgen, Reykjavik, Iceland. kari.stefansson@decode.is. 13Faculty of Medicine, School of Health Sciences, University of Iceland, Reykjavik, Iceland. kari.stefansson@decode.is.
Format: Article in Journal/Newspaper
Language:English
Published: Nature Publishing Group 2021
Subjects:
Gen
Online Access:http://hdl.handle.net/2336/621914
https://doi.org/10.1038/s42003-021-02224-9
id ftlandspitaliuni:oai:www.hirsla.lsh.is:2336/621914
record_format openpolar
institution Open Polar
collection Hirsla - Landspítali University Hospital research archive
op_collection_id ftlandspitaliuni
language English
topic Heyrnarskerðing
Aldraðir
Gen
Hearing Loss
Aging
Genes
spellingShingle Heyrnarskerðing
Aldraðir
Gen
Hearing Loss
Aging
Genes
Ivarsdottir, Erna V
Holm, Hilma
Benonisdottir, Stefania
Olafsdottir, Thorhildur
Sveinbjornsson, Gardar
Thorleifsson, Gudmar
Eggertsson, Hannes P
Halldorsson, Gisli H
Hjorleifsson, Kristjan E
Melsted, Pall
Gylfason, Arnaldur
Arnadottir, Gudny A
Oddsson, Asmundur
Jensson, Brynjar O
Jonasdottir, Aslaug
Jonasdottir, Adalbjorg
Juliusdottir, Thorhildur
Stefansdottir, Lilja
Tragante, Vinicius
Halldorsson, Bjarni V
Petersen, Hannes
Thorgeirsson, Gudmundur
Thorsteinsdottir, Unnur
Sulem, Patrick
Hinriksdottir, Ingibjorg
Jonsdottir, Ingileif
Gudbjartsson, Daniel F
Stefansson, Kari
The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
topic_facet Heyrnarskerðing
Aldraðir
Gen
Hearing Loss
Aging
Genes
description To access publisher's full text version of this article, please click on the hyperlink in Additional Links field or click on the hyperlink at the top of the page marked Download Age-related hearing impairment (ARHI) is the most common sensory disorder in older adults. We conducted a genome-wide association meta-analysis of 121,934 ARHI cases and 591,699 controls from Iceland and the UK. We identified 21 novel sequence variants, of which 13 are rare, under either additive or recessive models. Of special interest are a missense variant in LOXHD1 (MAF = 1.96%) and a tandem duplication in FBF1 covering 4 exons (MAF = 0.22%) associating with ARHI (OR = 3.7 for homozygotes, P = 1.7 × 10-22 and OR = 4.2 for heterozygotes, P = 5.7 × 10-27, respectively). We constructed an ARHI genetic risk score (GRS) using common variants and showed that a common variant GRS can identify individuals at risk comparable to carriers of rare high penetrance variants. Furthermore, we found that ARHI and tinnitus share genetic causes. This study sheds a new light on the genetic architecture of ARHI, through several rare variants in both Mendelian deafness genes and genes not previously linked to hearing.
author2 1deCODE Genetics/Amgen, Reykjavik, Iceland. 2School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland. 3Department of Computing and Mathematical Sciences, California Institute of Technology, Pasadena, CA, USA. 4School of Technology, Reykjavik University, Reykjavik, Iceland. 5Faculty of Medicine, School of Health Sciences, University of Iceland, Reykjavik, Iceland. 6Akureyri Hospital, Akureyri, Iceland. 7Division of Cardiology, Department of Internal Medicine, Landspitali University Hospital, Reykjavik, Iceland. 8National Institute of Hearing and Speech in Iceland, Reykjavik, Iceland. 9Department of Immunology, Landspitali University Hospital, Reykjavik, Iceland. 10deCODE Genetics/Amgen, Reykjavik, Iceland. daniel.gudbjartsson@decode.is. 11School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland. daniel.gudbjartsson@decode.is. 12deCODE Genetics/Amgen, Reykjavik, Iceland. kari.stefansson@decode.is. 13Faculty of Medicine, School of Health Sciences, University of Iceland, Reykjavik, Iceland. kari.stefansson@decode.is.
format Article in Journal/Newspaper
author Ivarsdottir, Erna V
Holm, Hilma
Benonisdottir, Stefania
Olafsdottir, Thorhildur
Sveinbjornsson, Gardar
Thorleifsson, Gudmar
Eggertsson, Hannes P
Halldorsson, Gisli H
Hjorleifsson, Kristjan E
Melsted, Pall
Gylfason, Arnaldur
Arnadottir, Gudny A
Oddsson, Asmundur
Jensson, Brynjar O
Jonasdottir, Aslaug
Jonasdottir, Adalbjorg
Juliusdottir, Thorhildur
Stefansdottir, Lilja
Tragante, Vinicius
Halldorsson, Bjarni V
Petersen, Hannes
Thorgeirsson, Gudmundur
Thorsteinsdottir, Unnur
Sulem, Patrick
Hinriksdottir, Ingibjorg
Jonsdottir, Ingileif
Gudbjartsson, Daniel F
Stefansson, Kari
author_facet Ivarsdottir, Erna V
Holm, Hilma
Benonisdottir, Stefania
Olafsdottir, Thorhildur
Sveinbjornsson, Gardar
Thorleifsson, Gudmar
Eggertsson, Hannes P
Halldorsson, Gisli H
Hjorleifsson, Kristjan E
Melsted, Pall
Gylfason, Arnaldur
Arnadottir, Gudny A
Oddsson, Asmundur
Jensson, Brynjar O
Jonasdottir, Aslaug
Jonasdottir, Adalbjorg
Juliusdottir, Thorhildur
Stefansdottir, Lilja
Tragante, Vinicius
Halldorsson, Bjarni V
Petersen, Hannes
Thorgeirsson, Gudmundur
Thorsteinsdottir, Unnur
Sulem, Patrick
Hinriksdottir, Ingibjorg
Jonsdottir, Ingileif
Gudbjartsson, Daniel F
Stefansson, Kari
author_sort Ivarsdottir, Erna V
title The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
title_short The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
title_full The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
title_fullStr The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
title_full_unstemmed The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
title_sort genetic architecture of age-related hearing impairment revealed by genome-wide association analysis.
publisher Nature Publishing Group
publishDate 2021
url http://hdl.handle.net/2336/621914
https://doi.org/10.1038/s42003-021-02224-9
genre Iceland
genre_facet Iceland
op_source Communications biology
4
1
706
England
op_relation https://www.nature.com/articles/s42003-021-02224-9
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190123/
Ivarsdottir EV, Holm H, Benonisdottir S, Olafsdottir T, Sveinbjornsson G, Thorleifsson G, Eggertsson HP, Halldorsson GH, Hjorleifsson KE, Melsted P, Gylfason A, Arnadottir GA, Oddsson A, Jensson BO, Jonasdottir A, Jonasdottir A, Juliusdottir T, Stefansdottir L, Tragante V, Halldorsson BV, Petersen H, Thorgeirsson G, Thorsteinsdottir U, Sulem P, Hinriksdottir I, Jonsdottir I, Gudbjartsson DF, Stefansson K. The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis. Commun Biol. 2021 Jun 9;4(1):706. doi:10.1038/s42003-021-02224-9.
34108613
doi:10.1038/s42003-021-02224-9
http://hdl.handle.net/2336/621914
2399-3642
Communications biology
op_rights Open Access - Opinn aðgangur
op_doi https://doi.org/10.1038/s42003-021-02224-9
container_title Communications Biology
container_volume 4
container_issue 1
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spelling ftlandspitaliuni:oai:www.hirsla.lsh.is:2336/621914 2023-05-15T16:50:23+02:00 The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis. Ivarsdottir, Erna V Holm, Hilma Benonisdottir, Stefania Olafsdottir, Thorhildur Sveinbjornsson, Gardar Thorleifsson, Gudmar Eggertsson, Hannes P Halldorsson, Gisli H Hjorleifsson, Kristjan E Melsted, Pall Gylfason, Arnaldur Arnadottir, Gudny A Oddsson, Asmundur Jensson, Brynjar O Jonasdottir, Aslaug Jonasdottir, Adalbjorg Juliusdottir, Thorhildur Stefansdottir, Lilja Tragante, Vinicius Halldorsson, Bjarni V Petersen, Hannes Thorgeirsson, Gudmundur Thorsteinsdottir, Unnur Sulem, Patrick Hinriksdottir, Ingibjorg Jonsdottir, Ingileif Gudbjartsson, Daniel F Stefansson, Kari 1deCODE Genetics/Amgen, Reykjavik, Iceland. 2School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland. 3Department of Computing and Mathematical Sciences, California Institute of Technology, Pasadena, CA, USA. 4School of Technology, Reykjavik University, Reykjavik, Iceland. 5Faculty of Medicine, School of Health Sciences, University of Iceland, Reykjavik, Iceland. 6Akureyri Hospital, Akureyri, Iceland. 7Division of Cardiology, Department of Internal Medicine, Landspitali University Hospital, Reykjavik, Iceland. 8National Institute of Hearing and Speech in Iceland, Reykjavik, Iceland. 9Department of Immunology, Landspitali University Hospital, Reykjavik, Iceland. 10deCODE Genetics/Amgen, Reykjavik, Iceland. daniel.gudbjartsson@decode.is. 11School of Engineering and Natural Sciences, University of Iceland, Reykjavik, Iceland. daniel.gudbjartsson@decode.is. 12deCODE Genetics/Amgen, Reykjavik, Iceland. kari.stefansson@decode.is. 13Faculty of Medicine, School of Health Sciences, University of Iceland, Reykjavik, Iceland. kari.stefansson@decode.is. 2021-10 http://hdl.handle.net/2336/621914 https://doi.org/10.1038/s42003-021-02224-9 en eng Nature Publishing Group https://www.nature.com/articles/s42003-021-02224-9 https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8190123/ Ivarsdottir EV, Holm H, Benonisdottir S, Olafsdottir T, Sveinbjornsson G, Thorleifsson G, Eggertsson HP, Halldorsson GH, Hjorleifsson KE, Melsted P, Gylfason A, Arnadottir GA, Oddsson A, Jensson BO, Jonasdottir A, Jonasdottir A, Juliusdottir T, Stefansdottir L, Tragante V, Halldorsson BV, Petersen H, Thorgeirsson G, Thorsteinsdottir U, Sulem P, Hinriksdottir I, Jonsdottir I, Gudbjartsson DF, Stefansson K. The genetic architecture of age-related hearing impairment revealed by genome-wide association analysis. Commun Biol. 2021 Jun 9;4(1):706. doi:10.1038/s42003-021-02224-9. 34108613 doi:10.1038/s42003-021-02224-9 http://hdl.handle.net/2336/621914 2399-3642 Communications biology Open Access - Opinn aðgangur Communications biology 4 1 706 England Heyrnarskerðing Aldraðir Gen Hearing Loss Aging Genes Article 2021 ftlandspitaliuni https://doi.org/10.1038/s42003-021-02224-9 2022-05-29T08:22:39Z To access publisher's full text version of this article, please click on the hyperlink in Additional Links field or click on the hyperlink at the top of the page marked Download Age-related hearing impairment (ARHI) is the most common sensory disorder in older adults. We conducted a genome-wide association meta-analysis of 121,934 ARHI cases and 591,699 controls from Iceland and the UK. We identified 21 novel sequence variants, of which 13 are rare, under either additive or recessive models. Of special interest are a missense variant in LOXHD1 (MAF = 1.96%) and a tandem duplication in FBF1 covering 4 exons (MAF = 0.22%) associating with ARHI (OR = 3.7 for homozygotes, P = 1.7 × 10-22 and OR = 4.2 for heterozygotes, P = 5.7 × 10-27, respectively). We constructed an ARHI genetic risk score (GRS) using common variants and showed that a common variant GRS can identify individuals at risk comparable to carriers of rare high penetrance variants. Furthermore, we found that ARHI and tinnitus share genetic causes. This study sheds a new light on the genetic architecture of ARHI, through several rare variants in both Mendelian deafness genes and genes not previously linked to hearing. Article in Journal/Newspaper Iceland Hirsla - Landspítali University Hospital research archive Communications Biology 4 1