Pan-Arctic plankton community structure and its global connectivity

The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the...

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Published in:Elementa: Science of the Anthropocene
Main Authors: Ibarbalz, Federico M., Henry, Nicolas, Mahé, Frédéric, Ardyna, Mathieu, Zingone, Adriana, Scalco, Eleonora, Lovejoy, Connie, Lombard, Fabien, Jaillon, Olivier, Iudicone, Daniele, Malviya, Shruti, Sullivan, Matthew B., Chaffron, Samuel, Karsenti, Eric, Babin, Marcel, Boss, Emmanuel, Wincker, Patrick, Zinger, Lucie, de Vargas, Colomban, Bowler, Chris, Karp-Boss, Lee, Tara Oceans Coordinators
Other Authors: 1Institut de biologie de l’École normale supérieure (IBENS), École normale supérieure, CNRS, INSERM, PSL Université Paris, Paris, France, 2Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Buenos Aires, Argentina, 3CONICET–Universidad de Buenos Aires, Centro de Investigaciones del Mar y la Atmósfera (CIMA), Buenos Aires, Argentina, 4CNRS–IRD–CONICET–UBA, Instituto Franco-Argentino para el Estudio del Clima y sus Impactos (IRL 3351 IFAECI), Buenos Aires, Argentina, 5Instituto Universitario de Seguridad Marítima (IUSM), Prefectura Naval Argentina, Buenos Aires, Argentina, 6Sorbonne Université, CNRS, Station Biologique de Roscoff, AD2M, UMR 7144, Roscoff, France, 7Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France, 8Current address: Sorbonne Université, CNRS, FR2424, ABiMS bioinformatic platform, Station Biologique de Roscoff, Roscoff, France, 9CIRAD, UMR PHIM, Montpellier, France, 10PHIM Plant Health Institute, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France, 11Takuvik Joint International Laboratory (UMI3376), Université Laval (Canada)–CNRS (France), Université Laval, Québec, Canada, 12Department of Earth System Science, Stanford University, Stanford, CA, USA, 13Sorbonne Université, CNRS, Laboratoire d’Océanographie de Villefranche, LOV, Paris, France, 14Stazione Zoologica Anton Dohrn, Villa Comunale, Naples, Italy, 15Département de Biologie, Québec Océan and Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, Canada, 16Génomique Métabolique, Genoscope, Institut de biologie François Jacob, Commissariat à l’Énergie Atomique (CEA), CNRS, Université Evry, Université Paris-Saclay, Evry, France, 17Department of Microbiology, Center of Microbiome Science, Byrd Polar and Climate Research Center, Ohio State University, Columbus, OH, USA, 18Department of Civil, Environmental and Geodetic Engineering, Center of Microbiome Science, Byrd Polar and Climate Research Center, Ohio State University, Columbus, OH, USA, 19Nantes University, CNRS UMR 6004, LS2N, Nantes, France, 20Directors’ Research, European Molecular Biology Laboratory, Heidelberg, Germany, 21School of Marine Sciences, University of Maine, Orono, ME, USA, 22Naturalis Biodiversity Center, Leiden, The Netherlands
Format: Article in Journal/Newspaper
Language:unknown
Published: University of California Press 2023
Subjects:
Online Access:http://hdl.handle.net/10754/691036
https://doi.org/10.1525/elementa.2022.00060
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institution Open Polar
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op_collection_id ftkingabdullahun
language unknown
description The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the biogeographic ranges of species that comprise the contemporary pool of unicellular eukaryotes in the AO as a first step toward understanding mechanisms that structure these communities and identifying potential target species for monitoring. Leveraging the Tara Oceans DNA metabarcoding data, we mapped the global distributions of operational taxonomic units (OTUs) found on Arctic shelves into five biogeographic categories, identified biogeographic indicators, and inferred the degree to which AO communities of unicellular eukaryotes share members with assemblages from lower latitudes. Arctic/Polar indicator OTUs, as well as some globally ubiquitous OTUs, dominated the detection and abundance of DNA reads in the Arctic samples. OTUs detected only in Arctic samples (Arctic-exclusives) showed restricted distribution with relatively low abundances, accounting for 10–16% of the total Arctic OTU pool. OTUs with high abundances in tropical and/or temperate latitudes (non-Polar indicators) were also found in the AO but mainly at its periphery. We observed a large change in community taxonomic composition across the Atlantic-Arctic continuum, supporting the idea that advection and environmental filtering are important processes that shape plankton assemblages in the AO. Altogether, this study highlights the connectivity between the AO and other oceans, and provides a framework for monitoring and assessing future changes in this vulnerable ecosystem. Tara Oceans (which includes both the Tara Oceans and Tara Oceans Polar Circle expeditions) would not exist without the leadership of the Tara Ocean Foundation and the continuous support of 23 institutes (http://oceans.taraexpeditions.org). We further thank the commitment of the ...
author2 1Institut de biologie de l’École normale supérieure (IBENS), École normale supérieure, CNRS, INSERM, PSL Université Paris, Paris, France
2Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Buenos Aires, Argentina
3CONICET–Universidad de Buenos Aires, Centro de Investigaciones del Mar y la Atmósfera (CIMA), Buenos Aires, Argentina
4CNRS–IRD–CONICET–UBA, Instituto Franco-Argentino para el Estudio del Clima y sus Impactos (IRL 3351 IFAECI), Buenos Aires, Argentina
5Instituto Universitario de Seguridad Marítima (IUSM), Prefectura Naval Argentina, Buenos Aires, Argentina
6Sorbonne Université, CNRS, Station Biologique de Roscoff, AD2M, UMR 7144, Roscoff, France
7Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France
8Current address: Sorbonne Université, CNRS, FR2424, ABiMS bioinformatic platform, Station Biologique de Roscoff, Roscoff, France
9CIRAD, UMR PHIM, Montpellier, France
10PHIM Plant Health Institute, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
11Takuvik Joint International Laboratory (UMI3376), Université Laval (Canada)–CNRS (France), Université Laval, Québec, Canada
12Department of Earth System Science, Stanford University, Stanford, CA, USA
13Sorbonne Université, CNRS, Laboratoire d’Océanographie de Villefranche, LOV, Paris, France
14Stazione Zoologica Anton Dohrn, Villa Comunale, Naples, Italy
15Département de Biologie, Québec Océan and Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, Canada
16Génomique Métabolique, Genoscope, Institut de biologie François Jacob, Commissariat à l’Énergie Atomique (CEA), CNRS, Université Evry, Université Paris-Saclay, Evry, France
17Department of Microbiology, Center of Microbiome Science, Byrd Polar and Climate Research Center, Ohio State University, Columbus, OH, USA
18Department of Civil, Environmental and Geodetic Engineering, Center of Microbiome Science, Byrd Polar and Climate Research Center, Ohio State University, Columbus, OH, USA
19Nantes University, CNRS UMR 6004, LS2N, Nantes, France
20Directors’ Research, European Molecular Biology Laboratory, Heidelberg, Germany
21School of Marine Sciences, University of Maine, Orono, ME, USA
22Naturalis Biodiversity Center, Leiden, The Netherlands
format Article in Journal/Newspaper
author Ibarbalz, Federico M.
Henry, Nicolas
Mahé, Frédéric
Ardyna, Mathieu
Zingone, Adriana
Scalco, Eleonora
Lovejoy, Connie
Lombard, Fabien
Jaillon, Olivier
Iudicone, Daniele
Malviya, Shruti
Sullivan, Matthew B.
Chaffron, Samuel
Karsenti, Eric
Babin, Marcel
Boss, Emmanuel
Wincker, Patrick
Zinger, Lucie
de Vargas, Colomban
Bowler, Chris
Karp-Boss, Lee
Tara Oceans Coordinators
spellingShingle Ibarbalz, Federico M.
Henry, Nicolas
Mahé, Frédéric
Ardyna, Mathieu
Zingone, Adriana
Scalco, Eleonora
Lovejoy, Connie
Lombard, Fabien
Jaillon, Olivier
Iudicone, Daniele
Malviya, Shruti
Sullivan, Matthew B.
Chaffron, Samuel
Karsenti, Eric
Babin, Marcel
Boss, Emmanuel
Wincker, Patrick
Zinger, Lucie
de Vargas, Colomban
Bowler, Chris
Karp-Boss, Lee
Tara Oceans Coordinators
Pan-Arctic plankton community structure and its global connectivity
author_facet Ibarbalz, Federico M.
Henry, Nicolas
Mahé, Frédéric
Ardyna, Mathieu
Zingone, Adriana
Scalco, Eleonora
Lovejoy, Connie
Lombard, Fabien
Jaillon, Olivier
Iudicone, Daniele
Malviya, Shruti
Sullivan, Matthew B.
Chaffron, Samuel
Karsenti, Eric
Babin, Marcel
Boss, Emmanuel
Wincker, Patrick
Zinger, Lucie
de Vargas, Colomban
Bowler, Chris
Karp-Boss, Lee
Tara Oceans Coordinators
author_sort Ibarbalz, Federico M.
title Pan-Arctic plankton community structure and its global connectivity
title_short Pan-Arctic plankton community structure and its global connectivity
title_full Pan-Arctic plankton community structure and its global connectivity
title_fullStr Pan-Arctic plankton community structure and its global connectivity
title_full_unstemmed Pan-Arctic plankton community structure and its global connectivity
title_sort pan-arctic plankton community structure and its global connectivity
publisher University of California Press
publishDate 2023
url http://hdl.handle.net/10754/691036
https://doi.org/10.1525/elementa.2022.00060
genre Arctic
Arctic
Arctic Ocean
Atlantic Arctic
Atlantic-Arctic
Global warming
genre_facet Arctic
Arctic
Arctic Ocean
Atlantic Arctic
Atlantic-Arctic
Global warming
op_relation https://online.ucpress.edu/elementa/article/11/1/00060/195862/Pan-Arctic-plankton-community-structure-and-its
Ibarbalz, F. M., Henry, N., Mahé, F., Ardyna, M., Zingone, A., Scalco, E., Lovejoy, C., Lombard, F., Jaillon, O., Iudicone, D., Malviya, S., Sullivan, M. B., Chaffron, S., Karsenti, E., Babin, M., Boss, E., Wincker, P., Zinger, L., … de Vargas, C. (2023). Pan-Arctic plankton community structure and its global connectivity. Elementa: Science of the Anthropocene, 11(1). https://doi.org/10.1525/elementa.2022.00060
doi:10.1525/elementa.2022.00060
2325-1026
1
Elementa: Science of the Anthropocene
http://hdl.handle.net/10754/691036
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op_doi https://doi.org/10.1525/elementa.2022.00060
container_title Elementa: Science of the Anthropocene
container_volume 11
container_issue 1
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spelling ftkingabdullahun:oai:repository.kaust.edu.sa:10754/691036 2023-12-31T10:01:57+01:00 Pan-Arctic plankton community structure and its global connectivity Ibarbalz, Federico M. Henry, Nicolas Mahé, Frédéric Ardyna, Mathieu Zingone, Adriana Scalco, Eleonora Lovejoy, Connie Lombard, Fabien Jaillon, Olivier Iudicone, Daniele Malviya, Shruti Sullivan, Matthew B. Chaffron, Samuel Karsenti, Eric Babin, Marcel Boss, Emmanuel Wincker, Patrick Zinger, Lucie de Vargas, Colomban Bowler, Chris Karp-Boss, Lee Tara Oceans Coordinators 1Institut de biologie de l’École normale supérieure (IBENS), École normale supérieure, CNRS, INSERM, PSL Université Paris, Paris, France 2Universidad de Buenos Aires, Facultad de Ciencias Exactas y Naturales, Buenos Aires, Argentina 3CONICET–Universidad de Buenos Aires, Centro de Investigaciones del Mar y la Atmósfera (CIMA), Buenos Aires, Argentina 4CNRS–IRD–CONICET–UBA, Instituto Franco-Argentino para el Estudio del Clima y sus Impactos (IRL 3351 IFAECI), Buenos Aires, Argentina 5Instituto Universitario de Seguridad Marítima (IUSM), Prefectura Naval Argentina, Buenos Aires, Argentina 6Sorbonne Université, CNRS, Station Biologique de Roscoff, AD2M, UMR 7144, Roscoff, France 7Research Federation for the Study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, Paris, France 8Current address: Sorbonne Université, CNRS, FR2424, ABiMS bioinformatic platform, Station Biologique de Roscoff, Roscoff, France 9CIRAD, UMR PHIM, Montpellier, France 10PHIM Plant Health Institute, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France 11Takuvik Joint International Laboratory (UMI3376), Université Laval (Canada)–CNRS (France), Université Laval, Québec, Canada 12Department of Earth System Science, Stanford University, Stanford, CA, USA 13Sorbonne Université, CNRS, Laboratoire d’Océanographie de Villefranche, LOV, Paris, France 14Stazione Zoologica Anton Dohrn, Villa Comunale, Naples, Italy 15Département de Biologie, Québec Océan and Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, Canada 16Génomique Métabolique, Genoscope, Institut de biologie François Jacob, Commissariat à l’Énergie Atomique (CEA), CNRS, Université Evry, Université Paris-Saclay, Evry, France 17Department of Microbiology, Center of Microbiome Science, Byrd Polar and Climate Research Center, Ohio State University, Columbus, OH, USA 18Department of Civil, Environmental and Geodetic Engineering, Center of Microbiome Science, Byrd Polar and Climate Research Center, Ohio State University, Columbus, OH, USA 19Nantes University, CNRS UMR 6004, LS2N, Nantes, France 20Directors’ Research, European Molecular Biology Laboratory, Heidelberg, Germany 21School of Marine Sciences, University of Maine, Orono, ME, USA 22Naturalis Biodiversity Center, Leiden, The Netherlands 2023-04-06 http://hdl.handle.net/10754/691036 https://doi.org/10.1525/elementa.2022.00060 unknown University of California Press https://online.ucpress.edu/elementa/article/11/1/00060/195862/Pan-Arctic-plankton-community-structure-and-its Ibarbalz, F. M., Henry, N., Mahé, F., Ardyna, M., Zingone, A., Scalco, E., Lovejoy, C., Lombard, F., Jaillon, O., Iudicone, D., Malviya, S., Sullivan, M. B., Chaffron, S., Karsenti, E., Babin, M., Boss, E., Wincker, P., Zinger, L., … de Vargas, C. (2023). Pan-Arctic plankton community structure and its global connectivity. Elementa: Science of the Anthropocene, 11(1). https://doi.org/10.1525/elementa.2022.00060 doi:10.1525/elementa.2022.00060 2325-1026 1 Elementa: Science of the Anthropocene http://hdl.handle.net/10754/691036 11 Article 2023 ftkingabdullahun https://doi.org/10.1525/elementa.2022.00060 2023-12-02T20:19:38Z The Arctic Ocean (AO) is being rapidly transformed by global warming, but its biodiversity remains understudied for many planktonic organisms, in particular for unicellular eukaryotes that play pivotal roles in marine food webs and biogeochemical cycles. The aim of this study was to characterize the biogeographic ranges of species that comprise the contemporary pool of unicellular eukaryotes in the AO as a first step toward understanding mechanisms that structure these communities and identifying potential target species for monitoring. Leveraging the Tara Oceans DNA metabarcoding data, we mapped the global distributions of operational taxonomic units (OTUs) found on Arctic shelves into five biogeographic categories, identified biogeographic indicators, and inferred the degree to which AO communities of unicellular eukaryotes share members with assemblages from lower latitudes. Arctic/Polar indicator OTUs, as well as some globally ubiquitous OTUs, dominated the detection and abundance of DNA reads in the Arctic samples. OTUs detected only in Arctic samples (Arctic-exclusives) showed restricted distribution with relatively low abundances, accounting for 10–16% of the total Arctic OTU pool. OTUs with high abundances in tropical and/or temperate latitudes (non-Polar indicators) were also found in the AO but mainly at its periphery. We observed a large change in community taxonomic composition across the Atlantic-Arctic continuum, supporting the idea that advection and environmental filtering are important processes that shape plankton assemblages in the AO. Altogether, this study highlights the connectivity between the AO and other oceans, and provides a framework for monitoring and assessing future changes in this vulnerable ecosystem. Tara Oceans (which includes both the Tara Oceans and Tara Oceans Polar Circle expeditions) would not exist without the leadership of the Tara Ocean Foundation and the continuous support of 23 institutes (http://oceans.taraexpeditions.org). We further thank the commitment of the ... Article in Journal/Newspaper Arctic Arctic Arctic Ocean Atlantic Arctic Atlantic-Arctic Global warming King Abdullah University of Science and Technology: KAUST Repository Elementa: Science of the Anthropocene 11 1