Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean.
We explored how changes of viral abundance and community composition among four contrasting regions in the Southern Ocean relied on physicochemical and microbiological traits. During January-February 2015, we visited areas north and south of the South Orkney Islands (NSO and SSO) characterized by lo...
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2020
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Online Access: | http://hdl.handle.net/10754/664250 https://doi.org/10.3390/life10070107 |
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ftkingabdullahun:oai:repository.kaust.edu.sa:10754/664250 2023-12-03T10:14:19+01:00 Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. Sotomayor-Garcia, Ana Montserrat Sala, Maria Ferrera, Isabel Estrada, Marta Vázquez-Domínguez, Evaristo Emelianov, Mikhail Cortés, Pau Marrasé, Cèlia Ortega-Retuerta, Eva Nunes, Sdena M Castillo, Yaiza Serrano Cuerva, Maria Sebastián, Marta Dall'Osto, Manuel Simó, Rafel Vaqué, Dolors Red Sea Research Center (RSRC) Institut de Ciències del Mar-Consejo Superior de Investigaciones Científicas (ICM-CSIC), Passeig Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain. Instituto Español de Oceanografía (IEO), Centro Oceanográfico de Málaga, 29640 Fuengirola, Spain. C/Condi de la Cañada s/n, 10857 Acebo (Cáceres), Spain. Laboratoire d’Océanographie Microbienne, (CNRS UMR7621), 66650 Banyuls sur Mer, France. Institute of Oceanography and Global Change (IOCAG), University of Las Palmas de Gran Canaria (ULPGC), 35214 Telde, Spain. 2020-07-19T09:16:42Z application/pdf http://hdl.handle.net/10754/664250 https://doi.org/10.3390/life10070107 unknown MDPI AG https://www.mdpi.com/2075-1729/10/7/107 https://www.mdpi.com/2075-1729/10/7/107/pdf Sotomayor-Garcia, A., Montserrat Sala, M., Ferrera, I., Estrada, M., Vázquez-Domínguez, E., Emelianov, M., … Vaqué, D. (2020). Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. Life, 10(7), 107. doi:10.3390/life10070107 doi:10.3390/life10070107 2075-1729 7 Life 107 32635627 http://hdl.handle.net/10754/664250 10 Archived with thanks to Life (Basel, Switzerland) https://creativecommons.org/licenses/by/4.0/ Article 2020 ftkingabdullahun https://doi.org/10.3390/life10070107 2023-11-04T20:19:19Z We explored how changes of viral abundance and community composition among four contrasting regions in the Southern Ocean relied on physicochemical and microbiological traits. During January-February 2015, we visited areas north and south of the South Orkney Islands (NSO and SSO) characterized by low temperature and salinity and high inorganic nutrient concentration, north of South Georgia Island (NSG) and west of Anvers Island (WA), which have relatively higher temperatures and lower inorganic nutrient concentrations. Surface viral abundance (VA) was highest in NSG (21.50 ± 10.70 × 106 viruses mL-1) and lowest in SSO (2.96 ± 1.48 × 106 viruses mL-1). VA was positively correlated with temperature, prokaryote abundance and prokaryotic heterotrophic production, chlorophyll a, diatoms, haptophytes, fluorescent organic matter, and isoprene concentration, and was negatively correlated with inorganic nutrients (NO3-, SiO42-, PO43-), and dimethyl sulfide (DMS) concentrations. Viral communities determined by randomly amplified polymorphic DNA-polymerase chain reaction (RAPD-PCR) were grouped according to the sampling location, being more similar within them than among regions. The first two axes of a canonical correspondence analysis, including physicochemical (temperature, salinity, inorganic nutrients-NO3-, SiO42-, and dimethyl sulfoniopropionate -DMSP- and isoprene concentrations) and microbiological (chlorophyll a, haptophytes and diatom, and prokaryote abundance and prokaryotic heterotrophic production) factors accounted for 62.9% of the variance. The first axis, temperature-related, accounted for 33.8%; the second one, salinity-related, accounted for 29.1%. Thus, different environmental situations likely select different hosts for viruses, leading to distinct viral communities. Article in Journal/Newspaper Anvers Island South Georgia Island South Orkney Islands Southern Ocean King Abdullah University of Science and Technology: KAUST Repository Anvers ENVELOPE(-63.500,-63.500,-64.600,-64.600) Anvers Island ENVELOPE(-63.500,-63.500,-64.600,-64.600) South Georgia Island ENVELOPE(-36.750,-36.750,-54.250,-54.250) South Orkney Islands ENVELOPE(-45.500,-45.500,-60.583,-60.583) Southern Ocean Life 10 7 107 |
institution |
Open Polar |
collection |
King Abdullah University of Science and Technology: KAUST Repository |
op_collection_id |
ftkingabdullahun |
language |
unknown |
description |
We explored how changes of viral abundance and community composition among four contrasting regions in the Southern Ocean relied on physicochemical and microbiological traits. During January-February 2015, we visited areas north and south of the South Orkney Islands (NSO and SSO) characterized by low temperature and salinity and high inorganic nutrient concentration, north of South Georgia Island (NSG) and west of Anvers Island (WA), which have relatively higher temperatures and lower inorganic nutrient concentrations. Surface viral abundance (VA) was highest in NSG (21.50 ± 10.70 × 106 viruses mL-1) and lowest in SSO (2.96 ± 1.48 × 106 viruses mL-1). VA was positively correlated with temperature, prokaryote abundance and prokaryotic heterotrophic production, chlorophyll a, diatoms, haptophytes, fluorescent organic matter, and isoprene concentration, and was negatively correlated with inorganic nutrients (NO3-, SiO42-, PO43-), and dimethyl sulfide (DMS) concentrations. Viral communities determined by randomly amplified polymorphic DNA-polymerase chain reaction (RAPD-PCR) were grouped according to the sampling location, being more similar within them than among regions. The first two axes of a canonical correspondence analysis, including physicochemical (temperature, salinity, inorganic nutrients-NO3-, SiO42-, and dimethyl sulfoniopropionate -DMSP- and isoprene concentrations) and microbiological (chlorophyll a, haptophytes and diatom, and prokaryote abundance and prokaryotic heterotrophic production) factors accounted for 62.9% of the variance. The first axis, temperature-related, accounted for 33.8%; the second one, salinity-related, accounted for 29.1%. Thus, different environmental situations likely select different hosts for viruses, leading to distinct viral communities. |
author2 |
Red Sea Research Center (RSRC) Institut de Ciències del Mar-Consejo Superior de Investigaciones Científicas (ICM-CSIC), Passeig Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain. Instituto Español de Oceanografía (IEO), Centro Oceanográfico de Málaga, 29640 Fuengirola, Spain. C/Condi de la Cañada s/n, 10857 Acebo (Cáceres), Spain. Laboratoire d’Océanographie Microbienne, (CNRS UMR7621), 66650 Banyuls sur Mer, France. Institute of Oceanography and Global Change (IOCAG), University of Las Palmas de Gran Canaria (ULPGC), 35214 Telde, Spain. |
format |
Article in Journal/Newspaper |
author |
Sotomayor-Garcia, Ana Montserrat Sala, Maria Ferrera, Isabel Estrada, Marta Vázquez-Domínguez, Evaristo Emelianov, Mikhail Cortés, Pau Marrasé, Cèlia Ortega-Retuerta, Eva Nunes, Sdena M Castillo, Yaiza Serrano Cuerva, Maria Sebastián, Marta Dall'Osto, Manuel Simó, Rafel Vaqué, Dolors |
spellingShingle |
Sotomayor-Garcia, Ana Montserrat Sala, Maria Ferrera, Isabel Estrada, Marta Vázquez-Domínguez, Evaristo Emelianov, Mikhail Cortés, Pau Marrasé, Cèlia Ortega-Retuerta, Eva Nunes, Sdena M Castillo, Yaiza Serrano Cuerva, Maria Sebastián, Marta Dall'Osto, Manuel Simó, Rafel Vaqué, Dolors Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. |
author_facet |
Sotomayor-Garcia, Ana Montserrat Sala, Maria Ferrera, Isabel Estrada, Marta Vázquez-Domínguez, Evaristo Emelianov, Mikhail Cortés, Pau Marrasé, Cèlia Ortega-Retuerta, Eva Nunes, Sdena M Castillo, Yaiza Serrano Cuerva, Maria Sebastián, Marta Dall'Osto, Manuel Simó, Rafel Vaqué, Dolors |
author_sort |
Sotomayor-Garcia, Ana |
title |
Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. |
title_short |
Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. |
title_full |
Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. |
title_fullStr |
Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. |
title_full_unstemmed |
Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. |
title_sort |
assessing viral abundance and community composition in four contrasting regions of the southern ocean. |
publisher |
MDPI AG |
publishDate |
2020 |
url |
http://hdl.handle.net/10754/664250 https://doi.org/10.3390/life10070107 |
long_lat |
ENVELOPE(-63.500,-63.500,-64.600,-64.600) ENVELOPE(-63.500,-63.500,-64.600,-64.600) ENVELOPE(-36.750,-36.750,-54.250,-54.250) ENVELOPE(-45.500,-45.500,-60.583,-60.583) |
geographic |
Anvers Anvers Island South Georgia Island South Orkney Islands Southern Ocean |
geographic_facet |
Anvers Anvers Island South Georgia Island South Orkney Islands Southern Ocean |
genre |
Anvers Island South Georgia Island South Orkney Islands Southern Ocean |
genre_facet |
Anvers Island South Georgia Island South Orkney Islands Southern Ocean |
op_relation |
https://www.mdpi.com/2075-1729/10/7/107 https://www.mdpi.com/2075-1729/10/7/107/pdf Sotomayor-Garcia, A., Montserrat Sala, M., Ferrera, I., Estrada, M., Vázquez-Domínguez, E., Emelianov, M., … Vaqué, D. (2020). Assessing Viral Abundance and Community Composition in Four Contrasting Regions of the Southern Ocean. Life, 10(7), 107. doi:10.3390/life10070107 doi:10.3390/life10070107 2075-1729 7 Life 107 32635627 http://hdl.handle.net/10754/664250 10 |
op_rights |
Archived with thanks to Life (Basel, Switzerland) https://creativecommons.org/licenses/by/4.0/ |
op_doi |
https://doi.org/10.3390/life10070107 |
container_title |
Life |
container_volume |
10 |
container_issue |
7 |
container_start_page |
107 |
_version_ |
1784261474474000384 |