Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342

The impacts of ocean acidification will depend on the ability of marine organisms to tolerate, acclimate and eventually adapt to changes in ocean chemistry. Here, we use a unique transgenerational experiment to determine the molecular response of a coral reef fish to short-term, developmental and tr...

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Main Authors: Schunter, Celia Marei, Welch, Megan J., Nilsson, Göran E., Rummer, Jodie L., Munday, Philip L., Ravasi, Timothy
Other Authors: Biological and Environmental Sciences and Engineering (BESE) Division, Bioscience Program, Integrative Systems Biology Lab, ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland, Australia., Section for Physiology and Cell Biology, Department of Biosciences, University of Oslo, Oslo, Norway.
Format: Dataset
Language:unknown
Published: PANGAEA - Data Publisher for Earth & Environmental Science 2019
Subjects:
pH
Online Access:http://hdl.handle.net/10754/663946
https://doi.org/10.1594/pangaea.900202
id ftkingabdullahun:oai:repository.kaust.edu.sa:10754/663946
record_format openpolar
spelling ftkingabdullahun:oai:repository.kaust.edu.sa:10754/663946 2023-12-03T10:28:24+01:00 Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342 Schunter, Celia Marei Welch, Megan J. Nilsson, Göran E. Rummer, Jodie L. Munday, Philip L. Ravasi, Timothy Biological and Environmental Sciences and Engineering (BESE) Division Bioscience Program Integrative Systems Biology Lab ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland, Australia. Section for Physiology and Cell Biology, Department of Biosciences, University of Oslo, Oslo, Norway. 2019 http://hdl.handle.net/10754/663946 https://doi.org/10.1594/pangaea.900202 unknown PANGAEA - Data Publisher for Earth & Environmental Science DOI:10.1038/s41559-017-0428-8 Schunter, C., Welch, M. J., Nilsson, G. E., Rummer, J. L., Munday, P. L., & Ravasi, T. (2019). Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342 [Data set]. PANGAEA - Data Publisher for Earth & Environmental Science. https://doi.org/10.1594/PANGAEA.900202 doi:10.1594/pangaea.900202 http://hdl.handle.net/10754/663946 Acanthochromis polyacanthus Animalia Chordata Coast and continental shelf Containers and aquaria (20- 1000 L or < 1 m**2) Gene expression (incl. proteomics) Laboratory experiment Nekton Pelagos Single species South Pacific Tropical Type Species Registration number of species Uniform resource locator/link to reference Figure Treatment Gene name Gene expression pH standard deviation Temperature water Salinity Alkalinity total Partial pressure of carbon dioxide (water) at sea surface temperature (wet air) Partial pressure of carbon dioxide Carbonate system computation flag Carbon dioxide Fugacity of carbon dioxide (water) at sea surface temperature (wet air) Bicarbonate ion Carbonate ion Carbon inorganic dissolved Aragonite saturation state Calcite saturation state Experiment Dataset 2019 ftkingabdullahun https://doi.org/10.1594/pangaea.90020210.1038/s41559-017-0428-8 2023-11-04T20:27:06Z The impacts of ocean acidification will depend on the ability of marine organisms to tolerate, acclimate and eventually adapt to changes in ocean chemistry. Here, we use a unique transgenerational experiment to determine the molecular response of a coral reef fish to short-term, developmental and transgenerational exposure to elevated CO2, and to test how these responses are influenced by variations in tolerance to elevated CO2 exhibited by the parents. Within-generation responses in gene expression to end-of-century predicted CO2 levels indicate that a self-amplifying cycle in GABAergic neurotransmission is triggered, explaining previously reported neurological and behavioural impairments. Furthermore, epigenetic regulator genes exhibited a within-generation specific response, but with some divergence due to parental phenotype. Importantly, we find that altered gene expression for the majority of within-generation responses returns to baseline levels following parental exposure to elevated CO2 conditions. Our results show that both parental variation in tolerance and cross-generation exposure to elevated CO2 are crucial factors in determining the response of reef fish to changing ocean chemistry. Dataset Ocean acidification King Abdullah University of Science and Technology: KAUST Repository Pacific
institution Open Polar
collection King Abdullah University of Science and Technology: KAUST Repository
op_collection_id ftkingabdullahun
language unknown
topic Acanthochromis polyacanthus
Animalia
Chordata
Coast and continental shelf
Containers and aquaria (20- 1000 L or < 1 m**2)
Gene expression (incl. proteomics)
Laboratory experiment
Nekton
Pelagos
Single species
South Pacific
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Figure
Treatment
Gene name
Gene expression
pH
standard deviation
Temperature
water
Salinity
Alkalinity
total
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Partial pressure of carbon dioxide
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Bicarbonate ion
Carbonate ion
Carbon
inorganic
dissolved
Aragonite saturation state
Calcite saturation state
Experiment
spellingShingle Acanthochromis polyacanthus
Animalia
Chordata
Coast and continental shelf
Containers and aquaria (20- 1000 L or < 1 m**2)
Gene expression (incl. proteomics)
Laboratory experiment
Nekton
Pelagos
Single species
South Pacific
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Figure
Treatment
Gene name
Gene expression
pH
standard deviation
Temperature
water
Salinity
Alkalinity
total
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Partial pressure of carbon dioxide
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Bicarbonate ion
Carbonate ion
Carbon
inorganic
dissolved
Aragonite saturation state
Calcite saturation state
Experiment
Schunter, Celia Marei
Welch, Megan J.
Nilsson, Göran E.
Rummer, Jodie L.
Munday, Philip L.
Ravasi, Timothy
Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342
topic_facet Acanthochromis polyacanthus
Animalia
Chordata
Coast and continental shelf
Containers and aquaria (20- 1000 L or < 1 m**2)
Gene expression (incl. proteomics)
Laboratory experiment
Nekton
Pelagos
Single species
South Pacific
Tropical
Type
Species
Registration number of species
Uniform resource locator/link to reference
Figure
Treatment
Gene name
Gene expression
pH
standard deviation
Temperature
water
Salinity
Alkalinity
total
Partial pressure of carbon dioxide (water) at sea surface temperature (wet air)
Partial pressure of carbon dioxide
Carbonate system computation flag
Carbon dioxide
Fugacity of carbon dioxide (water) at sea surface temperature (wet air)
Bicarbonate ion
Carbonate ion
Carbon
inorganic
dissolved
Aragonite saturation state
Calcite saturation state
Experiment
description The impacts of ocean acidification will depend on the ability of marine organisms to tolerate, acclimate and eventually adapt to changes in ocean chemistry. Here, we use a unique transgenerational experiment to determine the molecular response of a coral reef fish to short-term, developmental and transgenerational exposure to elevated CO2, and to test how these responses are influenced by variations in tolerance to elevated CO2 exhibited by the parents. Within-generation responses in gene expression to end-of-century predicted CO2 levels indicate that a self-amplifying cycle in GABAergic neurotransmission is triggered, explaining previously reported neurological and behavioural impairments. Furthermore, epigenetic regulator genes exhibited a within-generation specific response, but with some divergence due to parental phenotype. Importantly, we find that altered gene expression for the majority of within-generation responses returns to baseline levels following parental exposure to elevated CO2 conditions. Our results show that both parental variation in tolerance and cross-generation exposure to elevated CO2 are crucial factors in determining the response of reef fish to changing ocean chemistry.
author2 Biological and Environmental Sciences and Engineering (BESE) Division
Bioscience Program
Integrative Systems Biology Lab
ARC Centre of Excellence for Coral Reef Studies, James Cook University, Townsville, Queensland, Australia.
Section for Physiology and Cell Biology, Department of Biosciences, University of Oslo, Oslo, Norway.
format Dataset
author Schunter, Celia Marei
Welch, Megan J.
Nilsson, Göran E.
Rummer, Jodie L.
Munday, Philip L.
Ravasi, Timothy
author_facet Schunter, Celia Marei
Welch, Megan J.
Nilsson, Göran E.
Rummer, Jodie L.
Munday, Philip L.
Ravasi, Timothy
author_sort Schunter, Celia Marei
title Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342
title_short Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342
title_full Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342
title_fullStr Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342
title_full_unstemmed Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342
title_sort seawater carbonate chemistry and gene expression of a reef fish acanthochromis polyacanthus, supplement to: schunter, celia; welch, megan j; nilsson, göran e; rummer, jodie l; munday, philip l; ravasi, timothy (2018): an interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. nature ecology & evolution, 2(2), 334-342
publisher PANGAEA - Data Publisher for Earth & Environmental Science
publishDate 2019
url http://hdl.handle.net/10754/663946
https://doi.org/10.1594/pangaea.900202
geographic Pacific
geographic_facet Pacific
genre Ocean acidification
genre_facet Ocean acidification
op_relation DOI:10.1038/s41559-017-0428-8
Schunter, C., Welch, M. J., Nilsson, G. E., Rummer, J. L., Munday, P. L., & Ravasi, T. (2019). Seawater carbonate chemistry and gene expression of a reef fish Acanthochromis polyacanthus, supplement to: Schunter, Celia; Welch, Megan J; Nilsson, Göran E; Rummer, Jodie L; Munday, Philip L; Ravasi, Timothy (2018): An interplay between plasticity and parental phenotype determines impacts of ocean acidification on a reef fish. Nature Ecology & Evolution, 2(2), 334-342 [Data set]. PANGAEA - Data Publisher for Earth & Environmental Science. https://doi.org/10.1594/PANGAEA.900202
doi:10.1594/pangaea.900202
http://hdl.handle.net/10754/663946
op_doi https://doi.org/10.1594/pangaea.90020210.1038/s41559-017-0428-8
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