Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling
Marine algae represent an important source of novel natural products. While their bioactive potential has been studied to some extent, limited information is available on marine algae from the Red Sea. This study aimed at the broad discovery of new bioactivities from a collection of twelve macroalga...
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Online Access: | http://hdl.handle.net/10754/623072 https://doi.org/10.3390/md15030080 |
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ftkingabdullahun:oai:repository.kaust.edu.sa:10754/623072 2023-12-31T10:22:46+01:00 Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling Kremb, Stephan Georg Müller, Constanze Schmitt-Kopplin, Philippe Voolstra, Christian R. Biological and Environmental Sciences and Engineering (BESE) Division Marine Science Program Red Sea Research Center (RSRC) Research Unit Analytical Biogeochemistry, Helmholtz Zentrum München, Ingolstaedter Landstrasse 1, D-85764 Neuherberg, Germany Chair of Analytical Food Chemistry, Technische Universität München (TUM), 85354 Freising-Weihenstephan, Germany 2017-03-20 application/pdf http://hdl.handle.net/10754/623072 https://doi.org/10.3390/md15030080 unknown MDPI AG http://www.mdpi.com/1660-3397/15/3/80 Kremb S, Müller C, Schmitt-Kopplin P, Voolstra C (2017) Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling. Marine Drugs 15: 80. Available: http://dx.doi.org/10.3390/md15030080. doi:10.3390/md15030080 1660-3397 Marine Drugs http://hdl.handle.net/10754/623072 This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/). https://creativecommons.org/licenses/by/4.0/ bioprospecting natural products algae cytological profiling High-Content Screening HIV Article 2017 ftkingabdullahun https://doi.org/10.3390/md15030080 2023-12-02T20:20:19Z Marine algae represent an important source of novel natural products. While their bioactive potential has been studied to some extent, limited information is available on marine algae from the Red Sea. This study aimed at the broad discovery of new bioactivities from a collection of twelve macroalgal species from the Central Red Sea. We used imaging-based High-Content Screening (HCS) with a diverse spectrum of cellular markers for detailed cytological profiling of fractionated algal extracts. The cytological profiles for 3 out of 60 algal fractions clustered closely to reference inhibitors and showed strong inhibitory activities on the HIV-1 reverse transcriptase in a single-enzyme biochemical assay, validating the suggested biological target. Subsequent chemical profiling of the active fractions of two brown algal species by ultra-high resolution mass spectrometry (FT-ICR-MS) revealed possible candidate molecules. A database query of these molecules led us to groups of compounds with structural similarities, which are suggested to be responsible for the observed activity. Our work demonstrates the versatility and power of cytological profiling for the bioprospecting of unknown biological resources and highlights Red Sea algae as a source of bioactives that may serve as a starting point for further studies. The following reagents were obtained through the NIH AIDS Reagent Program, Division of AIDS, NIAID, NIH: HeLa cells, D4T, DDI, Emtricitabine, beta-D-N4hydroxycytidine, and ddC. Research reported in this publication was supported by the King Abdullah University of Science and Technology (KAUST). We thank Horst Wolff (Carl Zeiss Microscopy, Germany) and Birgit Kraus (University of Regensburg, Germany) for assistance in the setup of the screening panels and imaging software. We would also like to thank Sami Alqarawi and the KAUST Bioscience Core lab for assistance. Article in Journal/Newspaper sami King Abdullah University of Science and Technology: KAUST Repository Marine Drugs 15 3 80 |
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Open Polar |
collection |
King Abdullah University of Science and Technology: KAUST Repository |
op_collection_id |
ftkingabdullahun |
language |
unknown |
topic |
bioprospecting natural products algae cytological profiling High-Content Screening HIV |
spellingShingle |
bioprospecting natural products algae cytological profiling High-Content Screening HIV Kremb, Stephan Georg Müller, Constanze Schmitt-Kopplin, Philippe Voolstra, Christian R. Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling |
topic_facet |
bioprospecting natural products algae cytological profiling High-Content Screening HIV |
description |
Marine algae represent an important source of novel natural products. While their bioactive potential has been studied to some extent, limited information is available on marine algae from the Red Sea. This study aimed at the broad discovery of new bioactivities from a collection of twelve macroalgal species from the Central Red Sea. We used imaging-based High-Content Screening (HCS) with a diverse spectrum of cellular markers for detailed cytological profiling of fractionated algal extracts. The cytological profiles for 3 out of 60 algal fractions clustered closely to reference inhibitors and showed strong inhibitory activities on the HIV-1 reverse transcriptase in a single-enzyme biochemical assay, validating the suggested biological target. Subsequent chemical profiling of the active fractions of two brown algal species by ultra-high resolution mass spectrometry (FT-ICR-MS) revealed possible candidate molecules. A database query of these molecules led us to groups of compounds with structural similarities, which are suggested to be responsible for the observed activity. Our work demonstrates the versatility and power of cytological profiling for the bioprospecting of unknown biological resources and highlights Red Sea algae as a source of bioactives that may serve as a starting point for further studies. The following reagents were obtained through the NIH AIDS Reagent Program, Division of AIDS, NIAID, NIH: HeLa cells, D4T, DDI, Emtricitabine, beta-D-N4hydroxycytidine, and ddC. Research reported in this publication was supported by the King Abdullah University of Science and Technology (KAUST). We thank Horst Wolff (Carl Zeiss Microscopy, Germany) and Birgit Kraus (University of Regensburg, Germany) for assistance in the setup of the screening panels and imaging software. We would also like to thank Sami Alqarawi and the KAUST Bioscience Core lab for assistance. |
author2 |
Biological and Environmental Sciences and Engineering (BESE) Division Marine Science Program Red Sea Research Center (RSRC) Research Unit Analytical Biogeochemistry, Helmholtz Zentrum München, Ingolstaedter Landstrasse 1, D-85764 Neuherberg, Germany Chair of Analytical Food Chemistry, Technische Universität München (TUM), 85354 Freising-Weihenstephan, Germany |
format |
Article in Journal/Newspaper |
author |
Kremb, Stephan Georg Müller, Constanze Schmitt-Kopplin, Philippe Voolstra, Christian R. |
author_facet |
Kremb, Stephan Georg Müller, Constanze Schmitt-Kopplin, Philippe Voolstra, Christian R. |
author_sort |
Kremb, Stephan Georg |
title |
Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling |
title_short |
Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling |
title_full |
Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling |
title_fullStr |
Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling |
title_full_unstemmed |
Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling |
title_sort |
bioactive potential of marine macroalgae from the central red sea (saudi arabia) assessed by high-throughput imaging-based phenotypic profiling |
publisher |
MDPI AG |
publishDate |
2017 |
url |
http://hdl.handle.net/10754/623072 https://doi.org/10.3390/md15030080 |
genre |
sami |
genre_facet |
sami |
op_relation |
http://www.mdpi.com/1660-3397/15/3/80 Kremb S, Müller C, Schmitt-Kopplin P, Voolstra C (2017) Bioactive Potential of Marine Macroalgae from the Central Red Sea (Saudi Arabia) Assessed by High-Throughput Imaging-Based Phenotypic Profiling. Marine Drugs 15: 80. Available: http://dx.doi.org/10.3390/md15030080. doi:10.3390/md15030080 1660-3397 Marine Drugs http://hdl.handle.net/10754/623072 |
op_rights |
This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/). https://creativecommons.org/licenses/by/4.0/ |
op_doi |
https://doi.org/10.3390/md15030080 |
container_title |
Marine Drugs |
container_volume |
15 |
container_issue |
3 |
container_start_page |
80 |
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1786834026278944768 |