MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast
Evidence for a general lack of genetic differentiation of intertidal invertebrate assemblages in the North Atlantic, based on mtDNA sequence variation, has been interpreted as resulting from recent colonization following the Last Glacial Maximum. In the present study, the phylogeographic patterns of...
Published in: | Journal of Evolutionary Biology |
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Format: | Article in Journal/Newspaper |
Language: | English |
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Consejo Superior de Investigaciones Científicas
2012
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Online Access: | https://scientiamarina.revistas.csic.es/index.php/scientiamarina/article/view/1315 https://doi.org/10.3989/scimar.03373.29A |
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ftjscientiamarin:oai:scientiamarina.revistas.csic.es:article/1315 |
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openpolar |
institution |
Open Polar |
collection |
Scientia Marina (E-Journal) |
op_collection_id |
ftjscientiamarin |
language |
English |
topic |
phylogeography Stenosoma direct development glacial refugia Pleistocene Glaciations demographic expansion connectivity filogeografía desarrollo directo refugio glaciar glaciaciones del Pleistoceno expansión demográfica conectividad |
spellingShingle |
phylogeography Stenosoma direct development glacial refugia Pleistocene Glaciations demographic expansion connectivity filogeografía desarrollo directo refugio glaciar glaciaciones del Pleistoceno expansión demográfica conectividad Xavier, Raquel Murias Santos, António Branco, Madalena MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast |
topic_facet |
phylogeography Stenosoma direct development glacial refugia Pleistocene Glaciations demographic expansion connectivity filogeografía desarrollo directo refugio glaciar glaciaciones del Pleistoceno expansión demográfica conectividad |
description |
Evidence for a general lack of genetic differentiation of intertidal invertebrate assemblages in the North Atlantic, based on mtDNA sequence variation, has been interpreted as resulting from recent colonization following the Last Glacial Maximum. In the present study, the phylogeographic patterns of one nuclear and one mtDNA gene fragments of two isopods, Stenosoma lancifer (Miers, 1881) and Stenosoma acuminatum Leach, 1814, from the northeast Atlantic were investigated. These organisms have direct development, which makes them poor dispersers, and are therefore expected to maintain signatures of past historical events in their genomes. Lack of genetic structure, significant deviations from neutrality and star-like haplotype networks have been observed for both mtDNA and nuclear markers of S. lancifer, as well as for the mtDNA of S. acuminatum. No sequence variation was observed for the nuclear gene fragment of S. acuminatum. These results suggest a scenario of recent colonization and demographic expansion and/or high population connectivity driven by ocean currents and sporadic long-distance dispersal through rafting. Las evidencias sobre la falta general de diferenciación genética en invertebrados intermareales en el Atlántico Norte, basadas en la variación del ADN mitocondrial, se han interpretado como el resultado de una colonización reciente tras el último máximo glacial del Pleistoceno. En este trabajo se investigan los patrones filogeográficos de un gen nuclear y un gen mitocondrial en dos isópodos, Stenosoma lancifer (Miers, 1881) y Stenosoma acuminatum Leach, 1814, capturados en el Atlántico noroccidental. Estos organismos tienen desarrollo directo y, por lo tanto su potencial de dispersión es limitado, por lo que se espera que sus genomas mantengan señales de acontecimientos históricos. Se ha observado la falta de estructura genética, desviaciones significativas de la neutralidad y redes de haplotipos en forma de estrella para ambos fragmentos de ADN mitocondrial y nuclear de S. lancifer, así como para el ADN mitocondrial de S. acuminatum. En el fragmento del gen nuclear de S. acuminatum no se observó variación en las secuencias genómicas. Estos resultados sugieren un escenario de colonización reciente y expansión demográfica y/o de alta conectividad entre poblaciones impulsada por las corrientes oceánicas y la dispersión ocasional a grandes distancias mediante rafting. |
format |
Article in Journal/Newspaper |
author |
Xavier, Raquel Murias Santos, António Branco, Madalena |
author_facet |
Xavier, Raquel Murias Santos, António Branco, Madalena |
author_sort |
Xavier, Raquel |
title |
MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast |
title_short |
MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast |
title_full |
MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast |
title_fullStr |
MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast |
title_full_unstemmed |
MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast |
title_sort |
mtdna and nuclear data reveal patterns of low genetic differentiation for the isopods stenosoma lancifer and stenosoma acuminatum, with low dispersal ability along the northeast atlantic coast |
publisher |
Consejo Superior de Investigaciones Científicas |
publishDate |
2012 |
url |
https://scientiamarina.revistas.csic.es/index.php/scientiamarina/article/view/1315 https://doi.org/10.3989/scimar.03373.29A |
long_lat |
ENVELOPE(163.850,163.850,-78.100,-78.100) ENVELOPE(-66.867,-66.867,-68.167,-68.167) ENVELOPE(-67.167,-67.167,-68.367,-68.367) |
geographic |
Alta Baja Miers Nordeste Refugio |
geographic_facet |
Alta Baja Miers Nordeste Refugio |
genre |
North Atlantic Northeast Atlantic |
genre_facet |
North Atlantic Northeast Atlantic |
op_source |
Scientia Marina; Vol. 76 No. 1 (2012); 133-140 Scientia Marina; Vol. 76 Núm. 1 (2012); 133-140 1886-8134 0214-8358 10.3989/scimar.2012.76n1 |
op_relation |
https://scientiamarina.revistas.csic.es/index.php/scientiamarina/article/view/1315/1399 Anadón R. 1975. Aportación al conocimiento de la fauna bentónica de la ría de Vigo (NW de España) I. Pignogónidos y crustáceos de Panjón. Invest. Pesq. 39: 199-218. Andolfatto P. 2001. Adaptive hitchhiking effects on genome variability. Curr. Opin. Genet. Dev. 11: 635-641. http://dx.doi.org/10.1016/S0959-437X(00)00246-X Arrontes J., Anadón R. 1990a. Distribution of intertidal isopods in relation to geographical changes in macroalgal cover in the Bay of Biscay. J. Mar. Biol. Assoc. U. K. 70: 283-293. http://dx.doi.org/10.1017/S0025315400035402 Arrontes J., Anadón R. 1990b. Seasonal variation and population dynamics of isopods inhabiting intertidal macroalgae. Sci. Mar. 54: 231-240. Bamber R. 1992. Eastward progression of the Lusitanian isopod Synisoma lancifer (Dollfus). Porcupine Newsletter. 5: 140. Campo D., Molares J., Garcia L., Fernandez-Rueda P., Garcia-Gonzalez C., Garcia-Vazquez E. 2010. Phylogeography of the European stalked barnacle (Pollicipes pollicipes): identification of glacial refugia. Mar. Biol., 157: 147-156. http://dx.doi.org/10.1007/s00227-009-1305-z Castellanos C., Junoy J. 2005. Synisoma albertoi, a new species from the Strait of Gibraltar (southern Spain) with a key to known species of the genus (Crustacea: Isopoda: Idoteidae). J. Mar. Biol. Assoc. U. K. 85: 1-6. http://dx.doi.org/10.1017/S0025315405012646 Castro C.G., Alvarez-Salgado X. A., Figueiras F.G., Perez F.F., Fraga F. 1997. Transient hydrographic and chemical conditions affecting microplankton populations in the coastal transition zone of the Iberian upwelling system (NW Spain) in September 1986. J. Mar. Res. 55: 321-352. http://dx.doi.org/10.1357/0022240973224436 Clement M., Posada D., Crandall K. 2000. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9: 1657-1660. http://dx.doi.org/10.1046/j.1365-294x.2000.01020.x PMid:11050560 Corander J., Waldmann P., Marttinen P., Sillanpää M.J. 2004. BAPS 2: enhanced possibilities for the analysis of genetic population structure. Bioinformatics 20: 2363-2369. http://dx.doi.org/10.1093/bioinformatics/bth250 PMid:15073024 Corander J., Sirén J., Arjas E. 2008. Bayesian Spatial Modelling of Genetic Population Structure. Comp. Stat. 23: 111-129. http://dx.doi.org/10.1007/s00180-007-0072-x Couceiro L., Barreiro R., Ruiz J.M., Sotka E.E. 2007. Genetic isolation by distance among populations of the netted dog whelk Nassarius reticulatus (L.) along the European Atlantic coastline. J. Hered. 98: 603-610. http://dx.doi.org/10.1093/jhered/esm067 PMid:17728274 Coyer J.A., Diekmann O.E., Serrão E.A., Procaccini G., Milchakova N., Pearson G.A., Stam W.T., Olsen J.L. 2004. Population genetics of dwarf eelgrass Zostera noltii throughout its biogeographic range. Mar. Ecol. Prog. Ser. 281: 51-62. http://dx.doi.org/10.3354/meps281051 Coyer J.A., Peters A.F., Stam W.T., Olsen J.L. 2003. Post-ice age recolonization and differentiation of Fucus serratus L. (Phaeophyceae; Fucaceae) populations in Northern Europe. Mol. Ecol. 12: 1817-1829. http://dx.doi.org/10.1046/j.1365-294X.2003.01850.x PMid:12803634 Excoffier L., Laval G., Schneider S. 2005. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50. Flot J.-F. 2010. SEQPHASE: a web tool for interconverting PHASE input/output files and FASTA sequence alignments. Mol. Ecol. Res. 10: 162-166. http://dx.doi.org/10.1111/j.1755-0998.2009.02732.x PMid:21565002 Fransen C.H.J.M., De Grave S. 2009. Evolution and radiation of shrimp-like decapods: an overview. In: Martin J.W., Crandall K.A., Felder D.L. (eds.), Decapod Crustacean Phylogenetics. CRC Press, pp. 246-259. http://dx.doi.org/10.1201/9781420092592-c12 Fraser C.I., Nikula R., Waters J.M. 2010. 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ftjscientiamarin:oai:scientiamarina.revistas.csic.es:article/1315 2023-05-15T17:37:11+02:00 MtDNA and nuclear data reveal patterns of low genetic differentiation for the isopods Stenosoma lancifer and Stenosoma acuminatum, with low dispersal ability along the northeast Atlantic coast El ADN mitocondrial y nuclear revelan patrones de baja diferenciación genética en la costa del Atlántico nordeste para los isópodos, Stenosoma lancifer y StenoSoma acuminatum, con baja capacidad de dispersión Xavier, Raquel Murias Santos, António Branco, Madalena 2012-03-30 application/pdf https://scientiamarina.revistas.csic.es/index.php/scientiamarina/article/view/1315 https://doi.org/10.3989/scimar.03373.29A eng eng Consejo Superior de Investigaciones Científicas https://scientiamarina.revistas.csic.es/index.php/scientiamarina/article/view/1315/1399 Anadón R. 1975. Aportación al conocimiento de la fauna bentónica de la ría de Vigo (NW de España) I. Pignogónidos y crustáceos de Panjón. Invest. Pesq. 39: 199-218. Andolfatto P. 2001. Adaptive hitchhiking effects on genome variability. Curr. Opin. Genet. Dev. 11: 635-641. http://dx.doi.org/10.1016/S0959-437X(00)00246-X Arrontes J., Anadón R. 1990a. Distribution of intertidal isopods in relation to geographical changes in macroalgal cover in the Bay of Biscay. J. Mar. Biol. Assoc. U. K. 70: 283-293. http://dx.doi.org/10.1017/S0025315400035402 Arrontes J., Anadón R. 1990b. Seasonal variation and population dynamics of isopods inhabiting intertidal macroalgae. Sci. Mar. 54: 231-240. Bamber R. 1992. Eastward progression of the Lusitanian isopod Synisoma lancifer (Dollfus). Porcupine Newsletter. 5: 140. Campo D., Molares J., Garcia L., Fernandez-Rueda P., Garcia-Gonzalez C., Garcia-Vazquez E. 2010. Phylogeography of the European stalked barnacle (Pollicipes pollicipes): identification of glacial refugia. Mar. Biol., 157: 147-156. http://dx.doi.org/10.1007/s00227-009-1305-z Castellanos C., Junoy J. 2005. Synisoma albertoi, a new species from the Strait of Gibraltar (southern Spain) with a key to known species of the genus (Crustacea: Isopoda: Idoteidae). J. Mar. Biol. Assoc. U. K. 85: 1-6. http://dx.doi.org/10.1017/S0025315405012646 Castro C.G., Alvarez-Salgado X. A., Figueiras F.G., Perez F.F., Fraga F. 1997. Transient hydrographic and chemical conditions affecting microplankton populations in the coastal transition zone of the Iberian upwelling system (NW Spain) in September 1986. J. Mar. Res. 55: 321-352. http://dx.doi.org/10.1357/0022240973224436 Clement M., Posada D., Crandall K. 2000. TCS: a computer program to estimate gene genealogies. Mol. Ecol. 9: 1657-1660. http://dx.doi.org/10.1046/j.1365-294x.2000.01020.x PMid:11050560 Corander J., Waldmann P., Marttinen P., Sillanpää M.J. 2004. BAPS 2: enhanced possibilities for the analysis of genetic population structure. Bioinformatics 20: 2363-2369. http://dx.doi.org/10.1093/bioinformatics/bth250 PMid:15073024 Corander J., Sirén J., Arjas E. 2008. Bayesian Spatial Modelling of Genetic Population Structure. Comp. Stat. 23: 111-129. http://dx.doi.org/10.1007/s00180-007-0072-x Couceiro L., Barreiro R., Ruiz J.M., Sotka E.E. 2007. Genetic isolation by distance among populations of the netted dog whelk Nassarius reticulatus (L.) along the European Atlantic coastline. J. Hered. 98: 603-610. http://dx.doi.org/10.1093/jhered/esm067 PMid:17728274 Coyer J.A., Diekmann O.E., Serrão E.A., Procaccini G., Milchakova N., Pearson G.A., Stam W.T., Olsen J.L. 2004. Population genetics of dwarf eelgrass Zostera noltii throughout its biogeographic range. Mar. Ecol. Prog. Ser. 281: 51-62. http://dx.doi.org/10.3354/meps281051 Coyer J.A., Peters A.F., Stam W.T., Olsen J.L. 2003. Post-ice age recolonization and differentiation of Fucus serratus L. (Phaeophyceae; Fucaceae) populations in Northern Europe. Mol. Ecol. 12: 1817-1829. http://dx.doi.org/10.1046/j.1365-294X.2003.01850.x PMid:12803634 Excoffier L., Laval G., Schneider S. 2005. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50. Flot J.-F. 2010. SEQPHASE: a web tool for interconverting PHASE input/output files and FASTA sequence alignments. Mol. Ecol. Res. 10: 162-166. http://dx.doi.org/10.1111/j.1755-0998.2009.02732.x PMid:21565002 Fransen C.H.J.M., De Grave S. 2009. Evolution and radiation of shrimp-like decapods: an overview. In: Martin J.W., Crandall K.A., Felder D.L. (eds.), Decapod Crustacean Phylogenetics. CRC Press, pp. 246-259. http://dx.doi.org/10.1201/9781420092592-c12 Fraser C.I., Nikula R., Waters J.M. 2010. Oceanic rafting by a coastal community. Proc. R. Soc. Biol. Sci. Ser. B. doi:10.1098/rspb.2010.1117 Frouin R., Fuiza A.F., Ambar I., Boyd T.J. 1990. 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Copyright (c) 2012 Consejo Superior de Investigaciones Científicas (CSIC) https://creativecommons.org/licenses/by/4.0 CC-BY Scientia Marina; Vol. 76 No. 1 (2012); 133-140 Scientia Marina; Vol. 76 Núm. 1 (2012); 133-140 1886-8134 0214-8358 10.3989/scimar.2012.76n1 phylogeography Stenosoma direct development glacial refugia Pleistocene Glaciations demographic expansion connectivity filogeografía desarrollo directo refugio glaciar glaciaciones del Pleistoceno expansión demográfica conectividad info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Peer-reviewed article Artículo revisado por pares 2012 ftjscientiamarin https://doi.org/10.3989/scimar.03373.29A https://doi.org/10.3989/scimar.2012.76n1 https://doi.org/10.1016/S0959-437X(00)00246-X https://doi.org/10.1017/S0025315400035402 https://doi.org/10.1007/s00227-009-1305-z https://doi.org/10.1017/S00253154 2022-03-20T16:31:16Z Evidence for a general lack of genetic differentiation of intertidal invertebrate assemblages in the North Atlantic, based on mtDNA sequence variation, has been interpreted as resulting from recent colonization following the Last Glacial Maximum. In the present study, the phylogeographic patterns of one nuclear and one mtDNA gene fragments of two isopods, Stenosoma lancifer (Miers, 1881) and Stenosoma acuminatum Leach, 1814, from the northeast Atlantic were investigated. These organisms have direct development, which makes them poor dispersers, and are therefore expected to maintain signatures of past historical events in their genomes. Lack of genetic structure, significant deviations from neutrality and star-like haplotype networks have been observed for both mtDNA and nuclear markers of S. lancifer, as well as for the mtDNA of S. acuminatum. No sequence variation was observed for the nuclear gene fragment of S. acuminatum. These results suggest a scenario of recent colonization and demographic expansion and/or high population connectivity driven by ocean currents and sporadic long-distance dispersal through rafting. Las evidencias sobre la falta general de diferenciación genética en invertebrados intermareales en el Atlántico Norte, basadas en la variación del ADN mitocondrial, se han interpretado como el resultado de una colonización reciente tras el último máximo glacial del Pleistoceno. En este trabajo se investigan los patrones filogeográficos de un gen nuclear y un gen mitocondrial en dos isópodos, Stenosoma lancifer (Miers, 1881) y Stenosoma acuminatum Leach, 1814, capturados en el Atlántico noroccidental. Estos organismos tienen desarrollo directo y, por lo tanto su potencial de dispersión es limitado, por lo que se espera que sus genomas mantengan señales de acontecimientos históricos. Se ha observado la falta de estructura genética, desviaciones significativas de la neutralidad y redes de haplotipos en forma de estrella para ambos fragmentos de ADN mitocondrial y nuclear de S. lancifer, así como para el ADN mitocondrial de S. acuminatum. En el fragmento del gen nuclear de S. acuminatum no se observó variación en las secuencias genómicas. Estos resultados sugieren un escenario de colonización reciente y expansión demográfica y/o de alta conectividad entre poblaciones impulsada por las corrientes oceánicas y la dispersión ocasional a grandes distancias mediante rafting. Article in Journal/Newspaper North Atlantic Northeast Atlantic Scientia Marina (E-Journal) Alta Baja Miers ENVELOPE(163.850,163.850,-78.100,-78.100) Nordeste ENVELOPE(-66.867,-66.867,-68.167,-68.167) Refugio ENVELOPE(-67.167,-67.167,-68.367,-68.367) Journal of Evolutionary Biology 24 3 505 517 |