New Approaches in Taxonomy Representatives of Rickettsiales Order

Systematics and nomenclature of representatives Rickettsiales order has always been based on a limited number of available phenotypic characteristics, due to their obligate intracellular localization. Intensive use of «molecular» technology has led to the description of a large number of new species...

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Published in:Epidemiology and Vaccine Prevention
Main Authors: S. Shpynov N., С. Шпынов Н.
Format: Article in Journal/Newspaper
Language:Russian
Published: «Numicom» LLC 2016
Subjects:
риккетсии
порядок Rickettsiales
систематика
номенклатура
эволюция
Rickettsia
order Rickettsiales
taxonomy nomenclature
evolution
Sibirica
Online Access:https://www.epidemvac.ru/jour/article/view/215
https://doi.org/10.31631/2073-3046-2016-15-6-48-61
id ftjepidemvac:oai:oai.epidemiology.elpub.ru:article/215
record_format openpolar
institution Open Polar
collection Epidemiology and Vaccine Prevention (E-Journal)
op_collection_id ftjepidemvac
language Russian
topic риккетсии
порядок Rickettsiales
систематика
номенклатура
эволюция
Rickettsia
order Rickettsiales
taxonomy nomenclature
evolution
spellingShingle риккетсии
порядок Rickettsiales
систематика
номенклатура
эволюция
Rickettsia
order Rickettsiales
taxonomy nomenclature
evolution
S. Shpynov N.
С. Шпынов Н.
New Approaches in Taxonomy Representatives of Rickettsiales Order
topic_facet риккетсии
порядок Rickettsiales
систематика
номенклатура
эволюция
Rickettsia
order Rickettsiales
taxonomy nomenclature
evolution
description Systematics and nomenclature of representatives Rickettsiales order has always been based on a limited number of available phenotypic characteristics, due to their obligate intracellular localization. Intensive use of «molecular» technology has led to the description of a large number of new species of this taxonomic group, as well as to the reclassification of some of its representatives. Another symbol of the era of «molecular» technology is the emergence of species, genera and families with candidate status («Candidatus») due to the inability of cultivation and studying of biological properties that is required for a valid description of the new species. It should be a legitimate solution to this problem, based on the development and application of new high technologies. This review summarizes recent data on the taxonomy, nomenclature and evolution of representatives order Rickettsiales, new technologies, approaches and methods for the study of certain groups of prokaryotes. Published materials were obtained in the analysis of foreign and Russian scientific publications, as well as on the basis of its own published data. The paper contains a new understanding of the classification within the genus Rickettsia. Систематика и номенклатура представителей порядка Rickettsiales всегда основывалась на ограниченном количестве доступных фенотипических характеристик, что связано с их облигатной внутриклеточной локализацией. Интенсивное применение «молекулярных» технологий привело к описанию значительного количества новых видов в этой таксономической группе, а также к реклассификации некоторых её представителей. Другим символом эпохи «молекулярных» технологий стало появление видов, родов и семейств имеющих статус кандидатов («Candidatus») вследствие невозможности культивирования и изучения биологических свойств, что требуется при описании нового валидного вида. Необходимо разрешение этой проблемы, основанное на развитии и применении новых наукоёмких технологий. В обзоре представлены современные данные по систематике, номенклатуре и эволюции представителей порядка Rickettsiales, новых технологиях, подходах и методах изучения некоторых групп прокариот. Публикуемые материалы были получены при анализе зарубежных и отечественных научных публикаций, а также на основании собственных опубликованных данных. Дано новое представление о классификации и таксономии внутри рода Rickettsia.
format Article in Journal/Newspaper
author S. Shpynov N.
С. Шпынов Н.
author_facet S. Shpynov N.
С. Шпынов Н.
author_sort S. Shpynov N.
title New Approaches in Taxonomy Representatives of Rickettsiales Order
title_short New Approaches in Taxonomy Representatives of Rickettsiales Order
title_full New Approaches in Taxonomy Representatives of Rickettsiales Order
title_fullStr New Approaches in Taxonomy Representatives of Rickettsiales Order
title_full_unstemmed New Approaches in Taxonomy Representatives of Rickettsiales Order
title_sort new approaches in taxonomy representatives of rickettsiales order
publisher «Numicom» LLC
publishDate 2016
url https://www.epidemvac.ru/jour/article/view/215
https://doi.org/10.31631/2073-3046-2016-15-6-48-61
genre Sibirica
genre_facet Sibirica
op_source Epidemiology and Vaccinal Prevention; Том 15, № 6 (2016); 48-61
Эпидемиология и Вакцинопрофилактика; Том 15, № 6 (2016); 48-61
2619-0494
2073-3046
10.31631/2073-3046-2016-15-6
op_relation https://www.epidemvac.ru/jour/article/view/215/216
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La Rocha-Lima H. Zur Antiologie des Fleckfebers. Berlin. Klin. Wsch., 1916; 53: 567.
Yu X.J., Walker D.H. Family I. rickettsiaceae pinkerton 1936, 186AL in Bergey’s manual of systematic bacteriology, third edition. Springer. New York, 2005: 96 - 116.
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Brenner D.J., Connor S.P., Winkler H.H., Steigerwalt A.G. Proposals to unify the genera Bartonella and Rochalimaea, with descriptions of Bartonella Quintana comb. nov., Bartonella henselae comb. nov., Bartonella elizabethae comb; nov., and to remove family Bartonellaceae from the order Rickettsiales. Int J. Syst. Bacteriol. 1993; 43: 777 - 786.
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Sassera D., Beninati T., Bandi C., Bouman E.A., Sacchi L., Fabbi M., Lo N. Candidatus Midichloria mitochondrii, an endosymbiont of the tick Ixodes ricinus with a unique intramitochondrial lifestyle. Int. J. Syst. Evol. Microbiol. 2006; 56: 2535 - 2540.
Mariconti M., Epis S., Sacchi L., Biggiogera M., Sassera D., Genchi M. et al. A study on the presence of flagella in the order Rickettsiales: the case of Candidatus Midichloria mitochondrii. Microbiology. 2012; 158: 1677 - 1683.
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spelling ftjepidemvac:oai:oai.epidemiology.elpub.ru:article/215 2023-05-15T18:19:41+02:00 New Approaches in Taxonomy Representatives of Rickettsiales Order Новые подходы в систематике представителей порядка Rickettsiales S. Shpynov N. С. Шпынов Н. 2016-12-20 application/pdf https://www.epidemvac.ru/jour/article/view/215 https://doi.org/10.31631/2073-3046-2016-15-6-48-61 rus rus «Numicom» LLC https://www.epidemvac.ru/jour/article/view/215/216 Ricketts H.A. microorganism which apparently has a specific relationship to Rocky Mountain spotted fever. A preliminary report. JAMA, 1909; 52: 379. La Rocha-Lima H. Zur Antiologie des Fleckfebers. Berlin. Klin. Wsch., 1916; 53: 567. Yu X.J., Walker D.H. Family I. rickettsiaceae pinkerton 1936, 186AL in Bergey’s manual of systematic bacteriology, third edition. Springer. New York, 2005: 96 - 116. Truper H. G. Etymology in Nomenclature of Procaryotes. In: Bergey’s Manual of Sytematic Bacteriology, second edition. Vol. 2 (The Proteobacteria), part A (Introductory Essays), Springer. New York; 2005: 89 - 99. Raoult D., Berbis.P Roux V., Xu W., Maurin M. A new tick-transmitted disease due to Rickettsia slovaca. Lancet. 1997; 350 (9071): 112 - 113. Parola Fi, Paddock C.D., Socolovschi C., Labruna M.B., Mediannikov O., Kernif T. et al. Update on tick-borne rickettsioses around the world: a geographic approach. Clin. Microbiol. Rev. 2013; 26 (4): 657 - 702. Тарасевич И.В. О систематике и номенклатуре риккетсий. ЖМЭИ. 1979; 1: 39 - 42. Garrity G.M., Bell J.A., Lilburn T. The Revised Road Map to the Manual. In: Bergey’s Manual of Sytematic Bacteriology, second edition. Vol. 2 (The Proteobacteria), part A (Introductory Essays), Springer. New York; 2005: 159 - 187. Garrity G.M., Bell J.A., Lilburn G.V. Class I. Alphaproteobacteria class. nov. In Bergey’s Manual of Systematic Bacteriology, 2nd edn, vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), Springer. New York. 2005; 1 - 574. Dumler S., Walker D.H. Class I. Order II. Rickettsiales gieszczykiewicz 1939, 25AL. In: Bergey's Manual of Sytematic Bacteriology, second edition. Vol. 2 (The Proteobacteria), part C (The Alpha-, Beta-, Delta-, and Epsilonproteobacteria), Springer. New York. 2005; 96 - 160. Weisburg W.G., Dobson M.E., Samuel J.E., et al. Phylogenetic diversity of rickettsiae. J. Bacteriol. 1989; 171: 4202 - 4206. Roux V., Bergoin M., Lamaze N., Raoult D. Reassessment of the taxonomic position of Rickettsiella grylli. Int. J. Syst. Bacteriol. 1997; 47 (4): 1255 - 1257. Tan C.K., Owens L. Infectivity, transmission and 16S rRNA sequencing of a rickettsia, Coxiella cheraxi sp. nov., from the freshwater crayfish Cherax quadricarinatus. Dis. Aquat. Organ. 2000; 41 (2): 115 - 122. Brenner D.J., Connor S.P., Winkler H.H., Steigerwalt A.G. Proposals to unify the genera Bartonella and Rochalimaea, with descriptions of Bartonella Quintana comb. nov., Bartonella henselae comb. nov., Bartonella elizabethae comb; nov., and to remove family Bartonellaceae from the order Rickettsiales. Int J. Syst. Bacteriol. 1993; 43: 777 - 786. Birtles R.J., Harrison T.G., Saunders N.A., Molyneux D.H. Proposals to unify the genera Grahamella and Bartonella, with descriptions of Bartonella talpae comb. nov., Bartonella peromissci comb. nov., and three new species, Bartonella grahamii sp. nov., Bartonella taylorii sp. nov., and Bartonella doshiae sp. Nov. Int J. Syst. Bacteriol. 1995; 45: 1 - 8. Rikihisa Y., The tribe Ehrlichieae and ehrlichial diseases. Clin. Microbiol. Rev. 1991; 4: 286 - 308. Gromov B.V., Ossipov D.V. Holospora (ex Hafkine 1890) nom. rev., a genus of bacteria inhabiting the nuclei of paramecia. Int. J. Syst. Bacteriol. 1981; 31: 348 - 352. Gortz H.D., Schmidt H.J. Family III. Holosporaceae fam. nov. 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CC-BY Epidemiology and Vaccinal Prevention; Том 15, № 6 (2016); 48-61 Эпидемиология и Вакцинопрофилактика; Том 15, № 6 (2016); 48-61 2619-0494 2073-3046 10.31631/2073-3046-2016-15-6 риккетсии порядок Rickettsiales систематика номенклатура эволюция Rickettsia order Rickettsiales taxonomy nomenclature evolution info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2016 ftjepidemvac https://doi.org/10.31631/2073-3046-2016-15-6-48-61 https://doi.org/10.31631/2073-3046-2016-15-6 https://doi.org/10.1038/srep00013 https://doi.org/10.1016/j.ympev.2016.02.015 https://doi.org/10.1128/AEM.02680-15 https://doi.org/10.1186/1741-7007- 2021-09-30T19:53:26Z Systematics and nomenclature of representatives Rickettsiales order has always been based on a limited number of available phenotypic characteristics, due to their obligate intracellular localization. Intensive use of «molecular» technology has led to the description of a large number of new species of this taxonomic group, as well as to the reclassification of some of its representatives. Another symbol of the era of «molecular» technology is the emergence of species, genera and families with candidate status («Candidatus») due to the inability of cultivation and studying of biological properties that is required for a valid description of the new species. It should be a legitimate solution to this problem, based on the development and application of new high technologies. This review summarizes recent data on the taxonomy, nomenclature and evolution of representatives order Rickettsiales, new technologies, approaches and methods for the study of certain groups of prokaryotes. Published materials were obtained in the analysis of foreign and Russian scientific publications, as well as on the basis of its own published data. The paper contains a new understanding of the classification within the genus Rickettsia. Систематика и номенклатура представителей порядка Rickettsiales всегда основывалась на ограниченном количестве доступных фенотипических характеристик, что связано с их облигатной внутриклеточной локализацией. Интенсивное применение «молекулярных» технологий привело к описанию значительного количества новых видов в этой таксономической группе, а также к реклассификации некоторых её представителей. Другим символом эпохи «молекулярных» технологий стало появление видов, родов и семейств имеющих статус кандидатов («Candidatus») вследствие невозможности культивирования и изучения биологических свойств, что требуется при описании нового валидного вида. Необходимо разрешение этой проблемы, основанное на развитии и применении новых наукоёмких технологий. В обзоре представлены современные данные по систематике, номенклатуре и эволюции представителей порядка Rickettsiales, новых технологиях, подходах и методах изучения некоторых групп прокариот. Публикуемые материалы были получены при анализе зарубежных и отечественных научных публикаций, а также на основании собственных опубликованных данных. Дано новое представление о классификации и таксономии внутри рода Rickettsia. Article in Journal/Newspaper Sibirica Epidemiology and Vaccine Prevention (E-Journal) Epidemiology and Vaccine Prevention 15 6 48 61

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