DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey
The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during...
Published in: | Polar Science |
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Main Authors: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | unknown |
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Elsevier
2011
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Online Access: | https://researchonline.jcu.edu.au/46364/1/DNA%20barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf |
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ftjamescook:oai:researchonline.jcu.edu.au:46364 |
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Open Polar |
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James Cook University, Australia: ResearchOnline@JCU |
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ftjamescook |
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description |
The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007-2008. The Australian vessel RSV Aurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. |
format |
Article in Journal/Newspaper |
author |
Dettai, Agnes Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gael Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, K. Wadley, Victoria Améziane, Nadia |
spellingShingle |
Dettai, Agnes Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gael Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, K. Wadley, Victoria Améziane, Nadia DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey |
author_facet |
Dettai, Agnes Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gael Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, K. Wadley, Victoria Améziane, Nadia |
author_sort |
Dettai, Agnes |
title |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey |
title_short |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey |
title_full |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey |
title_fullStr |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey |
title_full_unstemmed |
DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey |
title_sort |
dna barcoding and molecular systematics of the benthic and demersal organisms of the ceamarc survey |
publisher |
Elsevier |
publishDate |
2011 |
url |
https://researchonline.jcu.edu.au/46364/1/DNA%20barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf |
long_lat |
ENVELOPE(140.000,140.000,-65.000,-65.000) ENVELOPE(140.017,140.017,-66.667,-66.667) ENVELOPE(140.013,140.013,-66.667,-66.667) |
geographic |
Antarctic Antarctic Peninsula Austral D'Urville Sea Dumont d'Urville Dumont-d'Urville Ross Sea Southern Ocean The Antarctic |
geographic_facet |
Antarctic Antarctic Peninsula Austral D'Urville Sea Dumont d'Urville Dumont-d'Urville Ross Sea Southern Ocean The Antarctic |
genre |
Antarc* Antarctic Antarctic Peninsula aurora australis D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean |
genre_facet |
Antarc* Antarctic Antarctic Peninsula aurora australis D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean |
op_relation |
http://dx.doi.org/10.1016/j.polar.2011.02.002 https://researchonline.jcu.edu.au/46364/ https://researchonline.jcu.edu.au/46364/1/DNA%20barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf Dettai, Agnes, Adamowizc, Sarah J. , Allcock, Louise, Arango, Claudia P., Barnes, David K.A., Barratt, Iain, Chenuil, Anne, Couloux, Arnaud, Cruaud, Corinne, David, Bruno, Denis, Françoise, Denys, Gael, Díaz, Angie, Eléaume, Marc, Féral, Jean-Pierre, Froger, Aurélie, Gallut, Cyril, Grant, Rachel, Griffiths, Huw J., Held, Christoph, Hemery, Lenaïg G., Hosie, Graham, Kuklinski, Piotr, Lecointre, Guillaume, Linse, Katrin, Lozouet, Pierre, Mah, Christopher, Monniot, Françoise, Norman, Mark D., O'Hara, Timothy, Ozouf-Costaz, Catherine, Piedallu, Claire, Pierrat, Benjamin, Poulin, Elie, Puillandre, Nicolas, Riddle, Martin, Samadi, Sarah, Saucède, Thomas, Schubart, Christoph, Smith, Peter J., Stevens, Darren W. , Steinke, Dirk, Strugnell, Jan M., Tarnowska, K., Wadley, Victoria, and Améziane, Nadia (2011) DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Polar Science, 5 (2). pp. 298-312. |
op_rights |
openpub |
op_doi |
https://doi.org/10.1016/j.polar.2011.02.002 |
container_title |
Polar Science |
container_volume |
5 |
container_issue |
2 |
container_start_page |
298 |
op_container_end_page |
312 |
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ftjamescook:oai:researchonline.jcu.edu.au:46364 2024-02-11T09:56:35+01:00 DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey Dettai, Agnes Adamowizc, Sarah J. Allcock, Louise Arango, Claudia P. Barnes, David K.A. Barratt, Iain Chenuil, Anne Couloux, Arnaud Cruaud, Corinne David, Bruno Denis, Françoise Denys, Gael Díaz, Angie Eléaume, Marc Féral, Jean-Pierre Froger, Aurélie Gallut, Cyril Grant, Rachel Griffiths, Huw J. Held, Christoph Hemery, Lenaïg G. Hosie, Graham Kuklinski, Piotr Lecointre, Guillaume Linse, Katrin Lozouet, Pierre Mah, Christopher Monniot, Françoise Norman, Mark D. O'Hara, Timothy Ozouf-Costaz, Catherine Piedallu, Claire Pierrat, Benjamin Poulin, Elie Puillandre, Nicolas Riddle, Martin Samadi, Sarah Saucède, Thomas Schubart, Christoph Smith, Peter J. Stevens, Darren W. Steinke, Dirk Strugnell, Jan M. Tarnowska, K. Wadley, Victoria Améziane, Nadia 2011 application/pdf https://researchonline.jcu.edu.au/46364/1/DNA%20barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf unknown Elsevier http://dx.doi.org/10.1016/j.polar.2011.02.002 https://researchonline.jcu.edu.au/46364/ https://researchonline.jcu.edu.au/46364/1/DNA%20barcoding%20and%20molecular%20systematics%20of%20the%20benthic%20and%20demersal%20organisms%20of%20the%20CEAMARC%20survey.pdf Dettai, Agnes, Adamowizc, Sarah J. , Allcock, Louise, Arango, Claudia P., Barnes, David K.A., Barratt, Iain, Chenuil, Anne, Couloux, Arnaud, Cruaud, Corinne, David, Bruno, Denis, Françoise, Denys, Gael, Díaz, Angie, Eléaume, Marc, Féral, Jean-Pierre, Froger, Aurélie, Gallut, Cyril, Grant, Rachel, Griffiths, Huw J., Held, Christoph, Hemery, Lenaïg G., Hosie, Graham, Kuklinski, Piotr, Lecointre, Guillaume, Linse, Katrin, Lozouet, Pierre, Mah, Christopher, Monniot, Françoise, Norman, Mark D., O'Hara, Timothy, Ozouf-Costaz, Catherine, Piedallu, Claire, Pierrat, Benjamin, Poulin, Elie, Puillandre, Nicolas, Riddle, Martin, Samadi, Sarah, Saucède, Thomas, Schubart, Christoph, Smith, Peter J., Stevens, Darren W. , Steinke, Dirk, Strugnell, Jan M., Tarnowska, K., Wadley, Victoria, and Améziane, Nadia (2011) DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Polar Science, 5 (2). pp. 298-312. openpub Article PeerReviewed 2011 ftjamescook https://doi.org/10.1016/j.polar.2011.02.002 2024-01-22T23:38:45Z The Dumont d'Urville Sea (East Antarctic region) has been less investigated for DNA barcoding and molecular taxonomy than other parts of the Southern Ocean, such as the Ross Sea and the Antarctic Peninsula. The Collaborative East Antarctic MARine Census (CEAMARC) took place in this area during the austral summer of 2007-2008. The Australian vessel RSV Aurora Australis collected very diverse samples of demersal and benthic organisms. The specimens were sorted centrally, and then distributed to taxonomic experts for molecular and morphological taxonomy and identification, especially barcoding. The COI sequences generated from CEAMARC material provide a sizeable proportion of the Census of Antarctic Marine Life barcodes although the studies are still ongoing, and represent the only source of sequences for a number of species. Barcoding appears to be a valuable method for identification within most groups, despite low divergences and haplotype sharing in a few species, and it is also useful as a preliminary taxonomic exploration method. Several new species are being described. CEAMARC samples have already provided new material for phylogeographic and phylogenetic studies in cephalopods, pycnogonids, teleost fish, crinoids and sea urchins, helping these studies to provide a better insight in the patterns of evolution in the Southern Ocean. Article in Journal/Newspaper Antarc* Antarctic Antarctic Peninsula aurora australis D'Urville Sea Dumont D'Urville Sea Polar Science Polar Science Ross Sea Southern Ocean James Cook University, Australia: ResearchOnline@JCU Antarctic Antarctic Peninsula Austral D'Urville Sea ENVELOPE(140.000,140.000,-65.000,-65.000) Dumont d'Urville ENVELOPE(140.017,140.017,-66.667,-66.667) Dumont-d'Urville ENVELOPE(140.013,140.013,-66.667,-66.667) Ross Sea Southern Ocean The Antarctic Polar Science 5 2 298 312 |