Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11

A psychrotrophic bacterium, Shewanella sp. AS-11 was isolated from a buccinid (shell) Neobuccinum living in the Antarctic ice-covered sea. An open reading frame of 1203 bp, coding for acetate kinase gene, called ack, was amplified, cloned into the expression vector, pETY-16b, and the enzyme was over...

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Main Authors: Tang, Md. Abul Kashem, Motoshima, Hiroyuki, Watanabe, Keiichi
Format: Article in Journal/Newspaper
Language:English
Published: Academic Journals (Kenya) 2014
Subjects:
Online Access:http://www.ajol.info/index.php/ajb/article/view/102392
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spelling ftjafricanj:oai:ojs.ajol.info:article/102392 2023-05-15T13:36:29+02:00 Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11 Tang, Md. Abul Kashem Motoshima, Hiroyuki Watanabe, Keiichi 2014-04-07 application/pdf http://www.ajol.info/index.php/ajb/article/view/102392 eng eng Academic Journals (Kenya) http://www.ajol.info/index.php/ajb/article/view/102392/92622 http://www.ajol.info/index.php/ajb/article/view/102392 10.4314/ajb.v11i29. Copyright for articles published in this journal is retained by the journal. African Journal of Biotechnology; Vol 11, No 29 (2012) 1684-5315 info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion Peer-reviewed Article 2014 ftjafricanj 2014-04-13T00:23:20Z A psychrotrophic bacterium, Shewanella sp. AS-11 was isolated from a buccinid (shell) Neobuccinum living in the Antarctic ice-covered sea. An open reading frame of 1203 bp, coding for acetate kinase gene, called ack, was amplified, cloned into the expression vector, pETY-16b, and the enzyme was overproduced by using T7 system in Escherichia coli BL21 (DE3). After extraction of crude recombinant acetate kinase, the desired enzyme was able to be purified on a Blue Sepharose CL-6B and Super-Q affinity column chromatography. The molecular mass of the enzyme is about 86 kDa, which is associated with two monomers. In respect of pH, the enzyme was stable between 6 to 8 and maximum activity was obtained at 7.5. The purified enzyme was stable at 30°C but ligand bound enzyme was stable at 40°C. The structural comparison to mesophilic and thermophilic acetate kinases demonstrates that the psychrophilic one contains lower number of salt bridges and cation-pi interaction. So, it can be suggested that the enzyme is cold adapted with thermolabile and flexible structure.Keywords: Acetate kinase, thermolabile, cold adapted, flexible, activityAfrican Journal of Biotechnology Vol. 11(29), pp. 7454-7463, 10 April, 2012 Article in Journal/Newspaper Antarc* Antarctic AJOL - African Journals Online Antarctic The Antarctic
institution Open Polar
collection AJOL - African Journals Online
op_collection_id ftjafricanj
language English
description A psychrotrophic bacterium, Shewanella sp. AS-11 was isolated from a buccinid (shell) Neobuccinum living in the Antarctic ice-covered sea. An open reading frame of 1203 bp, coding for acetate kinase gene, called ack, was amplified, cloned into the expression vector, pETY-16b, and the enzyme was overproduced by using T7 system in Escherichia coli BL21 (DE3). After extraction of crude recombinant acetate kinase, the desired enzyme was able to be purified on a Blue Sepharose CL-6B and Super-Q affinity column chromatography. The molecular mass of the enzyme is about 86 kDa, which is associated with two monomers. In respect of pH, the enzyme was stable between 6 to 8 and maximum activity was obtained at 7.5. The purified enzyme was stable at 30°C but ligand bound enzyme was stable at 40°C. The structural comparison to mesophilic and thermophilic acetate kinases demonstrates that the psychrophilic one contains lower number of salt bridges and cation-pi interaction. So, it can be suggested that the enzyme is cold adapted with thermolabile and flexible structure.Keywords: Acetate kinase, thermolabile, cold adapted, flexible, activityAfrican Journal of Biotechnology Vol. 11(29), pp. 7454-7463, 10 April, 2012
format Article in Journal/Newspaper
author Tang, Md. Abul Kashem
Motoshima, Hiroyuki
Watanabe, Keiichi
spellingShingle Tang, Md. Abul Kashem
Motoshima, Hiroyuki
Watanabe, Keiichi
Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11
author_facet Tang, Md. Abul Kashem
Motoshima, Hiroyuki
Watanabe, Keiichi
author_sort Tang, Md. Abul Kashem
title Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11
title_short Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11
title_full Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11
title_fullStr Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11
title_full_unstemmed Cloning, expression and purification of cold adapted acetate kinase from Shewanella species AS-11
title_sort cloning, expression and purification of cold adapted acetate kinase from shewanella species as-11
publisher Academic Journals (Kenya)
publishDate 2014
url http://www.ajol.info/index.php/ajb/article/view/102392
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
genre_facet Antarc*
Antarctic
op_source African Journal of Biotechnology; Vol 11, No 29 (2012)
1684-5315
op_relation http://www.ajol.info/index.php/ajb/article/view/102392/92622
http://www.ajol.info/index.php/ajb/article/view/102392
10.4314/ajb.v11i29.
op_rights Copyright for articles published in this journal is retained by the journal.
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