The Ectocarpus genome and brown algal genomics
Brown algae are important organisms both because of their key ecological roles in coastal ecosystems and because of the remarkable biological features that they have acquired during their unusual evolutionary history. The recent sequencing of the complete genome of the filamentous brown alga Ectocar...
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Language: | English |
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Academic Press - Elsevier Science
2012
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Online Access: | https://www.documentation.ird.fr/hor/fdi:010058980 |
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ftird:oai:ird.fr:fdi:010058980 |
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record_format |
openpolar |
institution |
Open Polar |
collection |
IRD (Institute de recherche pour le développement): Horizon |
op_collection_id |
ftird |
language |
English |
topic |
DIATOM THALASSIOSIRA-PSEUDONANA LAMINARIA-DIGITATA SILICULOSUS PHAEOPHYCEAE CHLAMYDOMONAS-REINHARDTII EVOLUTIONARY HISTORY TOPOISOMERASE-VI IRON-DEFICIENCY PLANT MICRORNAS NORTH-ATLANTIC PROTEIN FAMILY |
spellingShingle |
DIATOM THALASSIOSIRA-PSEUDONANA LAMINARIA-DIGITATA SILICULOSUS PHAEOPHYCEAE CHLAMYDOMONAS-REINHARDTII EVOLUTIONARY HISTORY TOPOISOMERASE-VI IRON-DEFICIENCY PLANT MICRORNAS NORTH-ATLANTIC PROTEIN FAMILY Cock, J.M. Sterck, L. Ahmed, S. Allen, A. E. Amoutzias, G. Anthouard, V. Artiguenave, F. Arun, A. Aury, J. M. Badger, J. H. Beszteri, B. Billiau, K. Bonnet, E. Bothwell, J. H. Bowler, C. Boyen, C. Brownlee, C. Carrano, C. J. Charrier, B. Cho, G. Y. Coelho, S. M. Collen, J. Le Corguille, G. Corre, E. Dartevelle, L. Da Silva, C. Delage, L. Delaroque, N. Dittami, S. M. /Doulbeau, Sylvie Elias, M. Farnham, G. Gachon, C. M. M. Godfroy, O. Gschloessl, B. Heesch, S. Jabbari, K. Jubin, C. Kawai, H. Kimura, K. Kloareg, B. Kuepper, F. C. Lang, D. Le Bail, A. Luthringer, R. Leblanc, C. Lerouge, P. Lohr, M. Lopez, P. J. Macaisne, N. Martens, C. Maumus, F. Michel, G. Miranda-Saavedra, D. Morales, J. Moreau, H. Motomura, T. Nagasato, C. Napoli, C. A. Nelson, D. R. Nyvall-Collen, P. Peters, A. F. Pommier, C. Potin, P. Poulain, J. Quesneville, H. Read, B. Rensing, S.A. Ritter, A. Rousvoal, S. Samanta, M. Samson, G. Schroeder, D.C. Scornet, D. Segurens, B. Strittmatter, M. Tonon, T. /Tregear, James Valentin, K. Von Dassow, P. Yamagishi, T. Rouze, P. Van de Peer, Y. Wincker, P. The Ectocarpus genome and brown algal genomics |
topic_facet |
DIATOM THALASSIOSIRA-PSEUDONANA LAMINARIA-DIGITATA SILICULOSUS PHAEOPHYCEAE CHLAMYDOMONAS-REINHARDTII EVOLUTIONARY HISTORY TOPOISOMERASE-VI IRON-DEFICIENCY PLANT MICRORNAS NORTH-ATLANTIC PROTEIN FAMILY |
description |
Brown algae are important organisms both because of their key ecological roles in coastal ecosystems and because of the remarkable biological features that they have acquired during their unusual evolutionary history. The recent sequencing of the complete genome of the filamentous brown alga Ectocarpus has provided unprecedented access to the molecular processes that underlie brown algal biology. Analysis of the genome sequence, which exhibits several unusual structural features, identified genes that are predicted to play key roles in several aspects of brown algal metabolism, in the construction of the multicellular bodyplan and in resistance to biotic and abiotic stresses. Information from the genome sequence is currently being used in combination with other genomic, genetic and biochemical tools to further investigate these and other aspects of brown algal biology at the molecular level. Here, we review some of the major discoveries that emerged from the analysis of the Ectocarpus genome sequence, with a particular focus on the unusual genome structure, inferences about brown algal evolution and novel aspects of brown algal metabolism. |
author2 |
Piganeau, G. (ed.) |
format |
Text |
author |
Cock, J.M. Sterck, L. Ahmed, S. Allen, A. E. Amoutzias, G. Anthouard, V. Artiguenave, F. Arun, A. Aury, J. M. Badger, J. H. Beszteri, B. Billiau, K. Bonnet, E. Bothwell, J. H. Bowler, C. Boyen, C. Brownlee, C. Carrano, C. J. Charrier, B. Cho, G. Y. Coelho, S. M. Collen, J. Le Corguille, G. Corre, E. Dartevelle, L. Da Silva, C. Delage, L. Delaroque, N. Dittami, S. M. /Doulbeau, Sylvie Elias, M. Farnham, G. Gachon, C. M. M. Godfroy, O. Gschloessl, B. Heesch, S. Jabbari, K. Jubin, C. Kawai, H. Kimura, K. Kloareg, B. Kuepper, F. C. Lang, D. Le Bail, A. Luthringer, R. Leblanc, C. Lerouge, P. Lohr, M. Lopez, P. J. Macaisne, N. Martens, C. Maumus, F. Michel, G. Miranda-Saavedra, D. Morales, J. Moreau, H. Motomura, T. Nagasato, C. Napoli, C. A. Nelson, D. R. Nyvall-Collen, P. Peters, A. F. Pommier, C. Potin, P. Poulain, J. Quesneville, H. Read, B. Rensing, S.A. Ritter, A. Rousvoal, S. Samanta, M. Samson, G. Schroeder, D.C. Scornet, D. Segurens, B. Strittmatter, M. Tonon, T. /Tregear, James Valentin, K. Von Dassow, P. Yamagishi, T. Rouze, P. Van de Peer, Y. Wincker, P. |
author_facet |
Cock, J.M. Sterck, L. Ahmed, S. Allen, A. E. Amoutzias, G. Anthouard, V. Artiguenave, F. Arun, A. Aury, J. M. Badger, J. H. Beszteri, B. Billiau, K. Bonnet, E. Bothwell, J. H. Bowler, C. Boyen, C. Brownlee, C. Carrano, C. J. Charrier, B. Cho, G. Y. Coelho, S. M. Collen, J. Le Corguille, G. Corre, E. Dartevelle, L. Da Silva, C. Delage, L. Delaroque, N. Dittami, S. M. /Doulbeau, Sylvie Elias, M. Farnham, G. Gachon, C. M. M. Godfroy, O. Gschloessl, B. Heesch, S. Jabbari, K. Jubin, C. Kawai, H. Kimura, K. Kloareg, B. Kuepper, F. C. Lang, D. Le Bail, A. Luthringer, R. Leblanc, C. Lerouge, P. Lohr, M. Lopez, P. J. Macaisne, N. Martens, C. Maumus, F. Michel, G. Miranda-Saavedra, D. Morales, J. Moreau, H. Motomura, T. Nagasato, C. Napoli, C. A. Nelson, D. R. Nyvall-Collen, P. Peters, A. F. Pommier, C. Potin, P. Poulain, J. Quesneville, H. Read, B. Rensing, S.A. Ritter, A. Rousvoal, S. Samanta, M. Samson, G. Schroeder, D.C. Scornet, D. Segurens, B. Strittmatter, M. Tonon, T. /Tregear, James Valentin, K. Von Dassow, P. Yamagishi, T. Rouze, P. Van de Peer, Y. Wincker, P. |
author_sort |
Cock, J.M. |
title |
The Ectocarpus genome and brown algal genomics |
title_short |
The Ectocarpus genome and brown algal genomics |
title_full |
The Ectocarpus genome and brown algal genomics |
title_fullStr |
The Ectocarpus genome and brown algal genomics |
title_full_unstemmed |
The Ectocarpus genome and brown algal genomics |
title_sort |
ectocarpus genome and brown algal genomics |
publisher |
Academic Press - Elsevier Science |
publishDate |
2012 |
url |
https://www.documentation.ird.fr/hor/fdi:010058980 |
genre |
North Atlantic |
genre_facet |
North Atlantic |
op_relation |
https://www.documentation.ird.fr/hor/fdi:010058980 oai:ird.fr:fdi:010058980 Cock J.M., Sterck L., Ahmed S., Allen A. E., Amoutzias G., Anthouard V., Artiguenave F., Arun A., Aury J. M., Badger J. H., Beszteri B., Billiau K., Bonnet E., Bothwell J. H., Bowler C., Boyen C., Brownlee C., Carrano C. J., Charrier B., Cho G. Y., Coelho S. M., Collen J., Le Corguille G., Corre E., Dartevelle L., Da Silva C., Delage L., Delaroque N., Dittami S. M., Doulbeau Sylvie, Elias M., Farnham G., Gachon C. M. M., Godfroy O., Gschloessl B., Heesch S., Jabbari K., Jubin C., Kawai H., Kimura K., Kloareg B., Kuepper F. C., Lang D., Le Bail A., Luthringer R., Leblanc C., Lerouge P., Lohr M., Lopez P. J., Macaisne N., Martens C., Maumus F., Michel G., Miranda-Saavedra D., Morales J., Moreau H., Motomura T., Nagasato C., Napoli C. A., Nelson D. R., Nyvall-Collen P., Peters A. F., Pommier C., Potin P., Poulain J., Quesneville H., Read B., Rensing S.A., Ritter A., Rousvoal S., Samanta M., Samson G., Schroeder D.C., Scornet D., Segurens B., Strittmatter M., Tonon T., Tregear James, Valentin K., Von Dassow P., Yamagishi T., Rouze P., Van de Peer Y., Wincker P. The Ectocarpus genome and brown algal genomics. In : Piganeau G. (ed.), . Genomic insights into the biology of algae Academic Press - Elsevier Science, ). 2012, p. 141-184 |
_version_ |
1810463685693407232 |
spelling |
ftird:oai:ird.fr:fdi:010058980 2024-09-15T18:23:28+00:00 The Ectocarpus genome and brown algal genomics Genomic insights into the biology of algae Cock, J.M. Sterck, L. Ahmed, S. Allen, A. E. Amoutzias, G. Anthouard, V. Artiguenave, F. Arun, A. Aury, J. M. Badger, J. H. Beszteri, B. Billiau, K. Bonnet, E. Bothwell, J. H. Bowler, C. Boyen, C. Brownlee, C. Carrano, C. J. Charrier, B. Cho, G. Y. Coelho, S. M. Collen, J. Le Corguille, G. Corre, E. Dartevelle, L. Da Silva, C. Delage, L. Delaroque, N. Dittami, S. M. /Doulbeau, Sylvie Elias, M. Farnham, G. Gachon, C. M. M. Godfroy, O. Gschloessl, B. Heesch, S. Jabbari, K. Jubin, C. Kawai, H. Kimura, K. Kloareg, B. Kuepper, F. C. Lang, D. Le Bail, A. Luthringer, R. Leblanc, C. Lerouge, P. Lohr, M. Lopez, P. J. Macaisne, N. Martens, C. Maumus, F. Michel, G. Miranda-Saavedra, D. Morales, J. Moreau, H. Motomura, T. Nagasato, C. Napoli, C. A. Nelson, D. R. Nyvall-Collen, P. Peters, A. F. Pommier, C. Potin, P. Poulain, J. Quesneville, H. Read, B. Rensing, S.A. Ritter, A. Rousvoal, S. Samanta, M. Samson, G. Schroeder, D.C. Scornet, D. Segurens, B. Strittmatter, M. Tonon, T. /Tregear, James Valentin, K. Von Dassow, P. Yamagishi, T. Rouze, P. Van de Peer, Y. Wincker, P. Piganeau, G. (ed.) 2012 https://www.documentation.ird.fr/hor/fdi:010058980 EN eng Academic Press - Elsevier Science https://www.documentation.ird.fr/hor/fdi:010058980 oai:ird.fr:fdi:010058980 Cock J.M., Sterck L., Ahmed S., Allen A. E., Amoutzias G., Anthouard V., Artiguenave F., Arun A., Aury J. M., Badger J. H., Beszteri B., Billiau K., Bonnet E., Bothwell J. H., Bowler C., Boyen C., Brownlee C., Carrano C. J., Charrier B., Cho G. Y., Coelho S. M., Collen J., Le Corguille G., Corre E., Dartevelle L., Da Silva C., Delage L., Delaroque N., Dittami S. M., Doulbeau Sylvie, Elias M., Farnham G., Gachon C. M. M., Godfroy O., Gschloessl B., Heesch S., Jabbari K., Jubin C., Kawai H., Kimura K., Kloareg B., Kuepper F. C., Lang D., Le Bail A., Luthringer R., Leblanc C., Lerouge P., Lohr M., Lopez P. J., Macaisne N., Martens C., Maumus F., Michel G., Miranda-Saavedra D., Morales J., Moreau H., Motomura T., Nagasato C., Napoli C. A., Nelson D. R., Nyvall-Collen P., Peters A. F., Pommier C., Potin P., Poulain J., Quesneville H., Read B., Rensing S.A., Ritter A., Rousvoal S., Samanta M., Samson G., Schroeder D.C., Scornet D., Segurens B., Strittmatter M., Tonon T., Tregear James, Valentin K., Von Dassow P., Yamagishi T., Rouze P., Van de Peer Y., Wincker P. The Ectocarpus genome and brown algal genomics. In : Piganeau G. (ed.), . Genomic insights into the biology of algae Academic Press - Elsevier Science, ). 2012, p. 141-184 DIATOM THALASSIOSIRA-PSEUDONANA LAMINARIA-DIGITATA SILICULOSUS PHAEOPHYCEAE CHLAMYDOMONAS-REINHARDTII EVOLUTIONARY HISTORY TOPOISOMERASE-VI IRON-DEFICIENCY PLANT MICRORNAS NORTH-ATLANTIC PROTEIN FAMILY text 2012 ftird 2024-08-15T05:57:42Z Brown algae are important organisms both because of their key ecological roles in coastal ecosystems and because of the remarkable biological features that they have acquired during their unusual evolutionary history. The recent sequencing of the complete genome of the filamentous brown alga Ectocarpus has provided unprecedented access to the molecular processes that underlie brown algal biology. Analysis of the genome sequence, which exhibits several unusual structural features, identified genes that are predicted to play key roles in several aspects of brown algal metabolism, in the construction of the multicellular bodyplan and in resistance to biotic and abiotic stresses. Information from the genome sequence is currently being used in combination with other genomic, genetic and biochemical tools to further investigate these and other aspects of brown algal biology at the molecular level. Here, we review some of the major discoveries that emerged from the analysis of the Ectocarpus genome sequence, with a particular focus on the unusual genome structure, inferences about brown algal evolution and novel aspects of brown algal metabolism. Text North Atlantic IRD (Institute de recherche pour le développement): Horizon |