Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]

"We present here the structural modeling and biochemical characterization of a recombinant superoxide dismutase (SOD) from Deschampsia antarctica E. Desv. [Poaceae] produced in Escherichia coli. The recombinant protein was purified by affinity chromatography nickel-nitrilotriacetic acid (Ni-NTA...

Full description

Bibliographic Details
Published in:Applied Biochemistry and Biotechnology
Main Authors: Rojas Contreras, Juan Antonio, Barba de la Rosa, Ana Paulina, De León Rodríguez, Antonio
Other Authors: Springer
Format: Article in Journal/Newspaper
Language:unknown
Published: 2015
Subjects:
Online Access:http://hdl.handle.net/11627/3894
https://doi.org/10.1007/s12010-015-1496-3
id ftipicytsanjose:oai:repositorio.ipicyt.edu.mx:11627/3894
record_format openpolar
spelling ftipicytsanjose:oai:repositorio.ipicyt.edu.mx:11627/3894 2023-05-15T13:54:02+02:00 Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae] Rojas Contreras, Juan Antonio Barba de la Rosa, Ana Paulina De León Rodríguez, Antonio Springer 2015-04 application/pdf http://hdl.handle.net/11627/3894 https://doi.org/10.1007/s12010-015-1496-3 unknown Rojas-Contreras, J.A., de la Rosa, A.P.B. & De León-Rodríguez, A. Appl Biochem Biotechnol (2015) 175: 3287. https://doi.org/10.1007/s12010-015-1496-3 http://hdl.handle.net/11627/3894 https://doi.org/10.1007/s12010-015-1496-3 Attribution-NonCommercial-NoDerivatives 4.0 Internacional http://creativecommons.org/licenses/by-nc-nd/4.0/ Acceso Abierto CC-BY-NC-ND Antioxidant Extremophile Oxidative stress Psychrophilic enzyme Superoxide ion BIOLOGÍA MOLECULAR article 2015 ftipicytsanjose https://doi.org/10.1007/s12010-015-1496-3 2020-05-03T16:26:04Z "We present here the structural modeling and biochemical characterization of a recombinant superoxide dismutase (SOD) from Deschampsia antarctica E. Desv. [Poaceae] produced in Escherichia coli. The recombinant protein was purified by affinity chromatography nickel-nitrilotriacetic acid (Ni-NTA), and its identity was demonstrated by immunoblotting and inhibition by H2O2 and KCN. Inductively coupled plasma optical emission spectroscopy (ICP-OES) analysis confirmed the presence of Cu and Zn. Modeling of the D. antarctica Cu/Zn-SOD (DaSOD) amino acid sequence using the SWISS-MODEL and 2Q2L_B monomer of the psychrophilic Cu/Zu-SOD from Potentilla atrosanguinea (PaSOD) as template produced a structure similar to that of the typical eukaryotic Cu/Zn-SODs. Activity assays using the p-nitro blue tetrazolium chloride (NBT) solution method showed that the purified DaSOD had a specific activity of 5818 U/mg at 25 °C and pH 7.2 and that it was active in a pH interval of 5–8 and a temperature interval of 0–40 °C. Furthermore, DaSOD was still active at −20 °C as observed by a zymogram assay. We found 100 % activity when it was heated at 80 °C for 60 min, indicating a high thermostability. DaSOD properties suggest that this enzyme could be useful for preventing the oxidation of refrigerated or frozen foods, as well as in the preparation of cosmetic and pharmaceutical products." Article in Journal/Newspaper Antarc* Antarctica Repository IPICYT (Instituto Potosino de Investigación Científica y Tecnológica) Applied Biochemistry and Biotechnology 175 7 3287 3296
institution Open Polar
collection Repository IPICYT (Instituto Potosino de Investigación Científica y Tecnológica)
op_collection_id ftipicytsanjose
language unknown
topic Antioxidant
Extremophile
Oxidative stress
Psychrophilic enzyme
Superoxide ion
BIOLOGÍA MOLECULAR
spellingShingle Antioxidant
Extremophile
Oxidative stress
Psychrophilic enzyme
Superoxide ion
BIOLOGÍA MOLECULAR
Rojas Contreras, Juan Antonio
Barba de la Rosa, Ana Paulina
De León Rodríguez, Antonio
Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]
topic_facet Antioxidant
Extremophile
Oxidative stress
Psychrophilic enzyme
Superoxide ion
BIOLOGÍA MOLECULAR
description "We present here the structural modeling and biochemical characterization of a recombinant superoxide dismutase (SOD) from Deschampsia antarctica E. Desv. [Poaceae] produced in Escherichia coli. The recombinant protein was purified by affinity chromatography nickel-nitrilotriacetic acid (Ni-NTA), and its identity was demonstrated by immunoblotting and inhibition by H2O2 and KCN. Inductively coupled plasma optical emission spectroscopy (ICP-OES) analysis confirmed the presence of Cu and Zn. Modeling of the D. antarctica Cu/Zn-SOD (DaSOD) amino acid sequence using the SWISS-MODEL and 2Q2L_B monomer of the psychrophilic Cu/Zu-SOD from Potentilla atrosanguinea (PaSOD) as template produced a structure similar to that of the typical eukaryotic Cu/Zn-SODs. Activity assays using the p-nitro blue tetrazolium chloride (NBT) solution method showed that the purified DaSOD had a specific activity of 5818 U/mg at 25 °C and pH 7.2 and that it was active in a pH interval of 5–8 and a temperature interval of 0–40 °C. Furthermore, DaSOD was still active at −20 °C as observed by a zymogram assay. We found 100 % activity when it was heated at 80 °C for 60 min, indicating a high thermostability. DaSOD properties suggest that this enzyme could be useful for preventing the oxidation of refrigerated or frozen foods, as well as in the preparation of cosmetic and pharmaceutical products."
author2 Springer
format Article in Journal/Newspaper
author Rojas Contreras, Juan Antonio
Barba de la Rosa, Ana Paulina
De León Rodríguez, Antonio
author_facet Rojas Contreras, Juan Antonio
Barba de la Rosa, Ana Paulina
De León Rodríguez, Antonio
author_sort Rojas Contreras, Juan Antonio
title Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]
title_short Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]
title_full Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]
title_fullStr Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]
title_full_unstemmed Expression and characterization of a recombinant psychrophilic Cu/Zn superoxide dismutase from deschampsia antarctica E. Desv. [Poaceae]
title_sort expression and characterization of a recombinant psychrophilic cu/zn superoxide dismutase from deschampsia antarctica e. desv. [poaceae]
publishDate 2015
url http://hdl.handle.net/11627/3894
https://doi.org/10.1007/s12010-015-1496-3
genre Antarc*
Antarctica
genre_facet Antarc*
Antarctica
op_relation Rojas-Contreras, J.A., de la Rosa, A.P.B. & De León-Rodríguez, A. Appl Biochem Biotechnol (2015) 175: 3287. https://doi.org/10.1007/s12010-015-1496-3
http://hdl.handle.net/11627/3894
https://doi.org/10.1007/s12010-015-1496-3
op_rights Attribution-NonCommercial-NoDerivatives 4.0 Internacional
http://creativecommons.org/licenses/by-nc-nd/4.0/
Acceso Abierto
op_rightsnorm CC-BY-NC-ND
op_doi https://doi.org/10.1007/s12010-015-1496-3
container_title Applied Biochemistry and Biotechnology
container_volume 175
container_issue 7
container_start_page 3287
op_container_end_page 3296
_version_ 1766259552282476544