Bacterial characterization of the snow cover at Spitzberg, Svalbard

International audience A sampling campaign was organized during spring 2004 in Spitzberg, Svalbard, in the area around the scientific base of Ny-Ålesund, to characterize the snow pack bacterial population. Total bacteria counts were established by 4',6-diamino-2-phenylindole (DAPI) in the seaso...

Full description

Bibliographic Details
Published in:FEMS Microbiology Ecology
Main Authors: Amato, Pierre, Hennebelle, Raphaëlle, Magand, Olivier, Sancelme, Martine, Delort, A.M., Barbante, Carlo, Boutron, Claude, F., Ferrari, Christophe, P.
Other Authors: Synthèse et étude de systèmes à intêret biologique (SEESIB), Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS), Laboratoire de glaciologie et géophysique de l'environnement (LGGE), Observatoire des Sciences de l'Univers de Grenoble (OSUG), Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Environmental Sciences Department, University of Ca’ Foscari Venice, Italy, Polytech Grenoble
Format: Article in Journal/Newspaper
Language:English
Published: HAL CCSD 2006
Subjects:
Online Access:https://insu.hal.science/insu-00375431
https://doi.org/10.1111/j.1574-6941.2006.00198.x
id ftinsu:oai:HAL:insu-00375431v1
record_format openpolar
spelling ftinsu:oai:HAL:insu-00375431v1 2024-04-28T08:09:26+00:00 Bacterial characterization of the snow cover at Spitzberg, Svalbard Amato, Pierre Hennebelle, Raphaëlle Magand, Olivier Sancelme, Martine Delort, A.M. Barbante, Carlo Boutron, Claude, F. Ferrari, Christophe, P. Synthèse et étude de systèmes à intêret biologique (SEESIB) Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS) Laboratoire de glaciologie et géophysique de l'environnement (LGGE) Observatoire des Sciences de l'Univers de Grenoble (OSUG) Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS) Environmental Sciences Department University of Ca’ Foscari Venice, Italy Polytech Grenoble 2006 https://insu.hal.science/insu-00375431 https://doi.org/10.1111/j.1574-6941.2006.00198.x en eng HAL CCSD Wiley-Blackwell info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1574-6941.2006.00198.x insu-00375431 https://insu.hal.science/insu-00375431 doi:10.1111/j.1574-6941.2006.00198.x ISSN: 0168-6496 EISSN: 1574-6941 FEMS Microbiology Ecology https://insu.hal.science/insu-00375431 FEMS Microbiology Ecology, 2006, 59 (2), pp.255 - 264. ⟨10.1111/j.1574-6941.2006.00198.x⟩ bacteria snow Arctic cold environment biodegradation [SDU.STU.GL]Sciences of the Universe [physics]/Earth Sciences/Glaciology info:eu-repo/semantics/article Journal articles 2006 ftinsu https://doi.org/10.1111/j.1574-6941.2006.00198.x 2024-04-05T00:31:43Z International audience A sampling campaign was organized during spring 2004 in Spitzberg, Svalbard, in the area around the scientific base of Ny-Ålesund, to characterize the snow pack bacterial population. Total bacteria counts were established by 4',6-diamino-2-phenylindole (DAPI) in the seasonal snow pack bordering the sea. On the sea shore, bacterial concentration was about 6 × 104 cells mL−1, without any significant variation according to depth. In the accumulation snow layer of the glacier, concentrations were about 2 × 104 cells mL−1, except in the 2003 summer layer, where it reached 2 × 105 cells mL−1, as the result of cell multiplication allowed by higher temperature and snow melting. Strains isolated from the seasonal snow pack were identified from their 16S rRNA gene sequences, and lodged in GenBank. They belong to the Alphaproteobacteria, Betaproteobacteria and Gammaproteobacteria, Firmicutes and Actinobacteria. They are closely related to cold environment bacteria, as revealed by phylogenetic tree constructions, and two appear to be of unknown affiliation. Using 1H nuclear magnetic resonance, it was shown that these isolates have the capacity to degrade organic compounds found in Arctic snow (propionate, acetate and formate), and this can allow them to develop when snow melts, and thus to be actively involved in snow chemistry. Article in Journal/Newspaper Arctic glacier Ny Ålesund Ny-Ålesund Spitzberg Svalbard Institut national des sciences de l'Univers: HAL-INSU FEMS Microbiology Ecology 59 2 255 264
institution Open Polar
collection Institut national des sciences de l'Univers: HAL-INSU
op_collection_id ftinsu
language English
topic bacteria
snow
Arctic
cold environment
biodegradation
[SDU.STU.GL]Sciences of the Universe [physics]/Earth Sciences/Glaciology
spellingShingle bacteria
snow
Arctic
cold environment
biodegradation
[SDU.STU.GL]Sciences of the Universe [physics]/Earth Sciences/Glaciology
Amato, Pierre
Hennebelle, Raphaëlle
Magand, Olivier
Sancelme, Martine
Delort, A.M.
Barbante, Carlo
Boutron, Claude, F.
Ferrari, Christophe, P.
Bacterial characterization of the snow cover at Spitzberg, Svalbard
topic_facet bacteria
snow
Arctic
cold environment
biodegradation
[SDU.STU.GL]Sciences of the Universe [physics]/Earth Sciences/Glaciology
description International audience A sampling campaign was organized during spring 2004 in Spitzberg, Svalbard, in the area around the scientific base of Ny-Ålesund, to characterize the snow pack bacterial population. Total bacteria counts were established by 4',6-diamino-2-phenylindole (DAPI) in the seasonal snow pack bordering the sea. On the sea shore, bacterial concentration was about 6 × 104 cells mL−1, without any significant variation according to depth. In the accumulation snow layer of the glacier, concentrations were about 2 × 104 cells mL−1, except in the 2003 summer layer, where it reached 2 × 105 cells mL−1, as the result of cell multiplication allowed by higher temperature and snow melting. Strains isolated from the seasonal snow pack were identified from their 16S rRNA gene sequences, and lodged in GenBank. They belong to the Alphaproteobacteria, Betaproteobacteria and Gammaproteobacteria, Firmicutes and Actinobacteria. They are closely related to cold environment bacteria, as revealed by phylogenetic tree constructions, and two appear to be of unknown affiliation. Using 1H nuclear magnetic resonance, it was shown that these isolates have the capacity to degrade organic compounds found in Arctic snow (propionate, acetate and formate), and this can allow them to develop when snow melts, and thus to be actively involved in snow chemistry.
author2 Synthèse et étude de systèmes à intêret biologique (SEESIB)
Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Institut de Chimie - CNRS Chimie (INC-CNRS)-Centre National de la Recherche Scientifique (CNRS)
Laboratoire de glaciologie et géophysique de l'environnement (LGGE)
Observatoire des Sciences de l'Univers de Grenoble (OSUG)
Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Université Joseph Fourier - Grenoble 1 (UJF)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut national des sciences de l'Univers (INSU - CNRS)-Institut national de recherche en sciences et technologies pour l'environnement et l'agriculture (IRSTEA)-Université Savoie Mont Blanc (USMB Université de Savoie Université de Chambéry )-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)
Environmental Sciences Department
University of Ca’ Foscari Venice, Italy
Polytech Grenoble
format Article in Journal/Newspaper
author Amato, Pierre
Hennebelle, Raphaëlle
Magand, Olivier
Sancelme, Martine
Delort, A.M.
Barbante, Carlo
Boutron, Claude, F.
Ferrari, Christophe, P.
author_facet Amato, Pierre
Hennebelle, Raphaëlle
Magand, Olivier
Sancelme, Martine
Delort, A.M.
Barbante, Carlo
Boutron, Claude, F.
Ferrari, Christophe, P.
author_sort Amato, Pierre
title Bacterial characterization of the snow cover at Spitzberg, Svalbard
title_short Bacterial characterization of the snow cover at Spitzberg, Svalbard
title_full Bacterial characterization of the snow cover at Spitzberg, Svalbard
title_fullStr Bacterial characterization of the snow cover at Spitzberg, Svalbard
title_full_unstemmed Bacterial characterization of the snow cover at Spitzberg, Svalbard
title_sort bacterial characterization of the snow cover at spitzberg, svalbard
publisher HAL CCSD
publishDate 2006
url https://insu.hal.science/insu-00375431
https://doi.org/10.1111/j.1574-6941.2006.00198.x
genre Arctic
glacier
Ny Ålesund
Ny-Ålesund
Spitzberg
Svalbard
genre_facet Arctic
glacier
Ny Ålesund
Ny-Ålesund
Spitzberg
Svalbard
op_source ISSN: 0168-6496
EISSN: 1574-6941
FEMS Microbiology Ecology
https://insu.hal.science/insu-00375431
FEMS Microbiology Ecology, 2006, 59 (2), pp.255 - 264. ⟨10.1111/j.1574-6941.2006.00198.x⟩
op_relation info:eu-repo/semantics/altIdentifier/doi/10.1111/j.1574-6941.2006.00198.x
insu-00375431
https://insu.hal.science/insu-00375431
doi:10.1111/j.1574-6941.2006.00198.x
op_doi https://doi.org/10.1111/j.1574-6941.2006.00198.x
container_title FEMS Microbiology Ecology
container_volume 59
container_issue 2
container_start_page 255
op_container_end_page 264
_version_ 1797577811224952832