Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments
International audience We compare the performance of the modern analog technique (MAT), the Imbrie and Kipp transfer function (IKTF), the generalized additive model (GAM) and weighted averaging partial least squares (WA PLS) on a southern hemisphere diatom relative abundance and winter sea ice conce...
Published in: | Progress in Oceanography |
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Format: | Article in Journal/Newspaper |
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Online Access: | https://hal.science/hal-02105563 https://doi.org/10.1016/j.pocean.2014.12.001 |
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ftinsu:oai:HAL:hal-02105563v1 2023-06-18T03:42:57+02:00 Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments Ferry, Alexander, Prvan, Tania Jersky, Brian Crosta, Xavier Armand, Leanne Department of Biological Sciences North Ryde Macquarie University Environnements et Paléoenvironnements OCéaniques (EPOC) Observatoire aquitain des sciences de l'univers (OASU) Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) 2015 https://hal.science/hal-02105563 https://doi.org/10.1016/j.pocean.2014.12.001 en eng HAL CCSD Elsevier info:eu-repo/semantics/altIdentifier/doi/10.1016/j.pocean.2014.12.001 hal-02105563 https://hal.science/hal-02105563 doi:10.1016/j.pocean.2014.12.001 ISSN: 0079-6611 Progress in Oceanography https://hal.science/hal-02105563 Progress in Oceanography, 2015, 131, pp.100-112. ⟨10.1016/j.pocean.2014.12.001⟩ [SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography [SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/Climatology info:eu-repo/semantics/article Journal articles 2015 ftinsu https://doi.org/10.1016/j.pocean.2014.12.001 2023-06-05T23:55:23Z International audience We compare the performance of the modern analog technique (MAT), the Imbrie and Kipp transfer function (IKTF), the generalized additive model (GAM) and weighted averaging partial least squares (WA PLS) on a southern hemisphere diatom relative abundance and winter sea ice concentration training data set. All relevant model assumptions are tested with a random 10-fold cross-validation, whilst a hold out cross-validation tested the explanatory power of each model on spatially independent validation data. We used auto correlograms on model residuals, variance partitioning, and principal coordinates analysis of neighbor matrices (PCNM) to investigate the importance of the spatial structure of our training database. A set of hierarchical logistic regression models (or Huisman–Olff–Fresco models) are used to infer the response of each diatom species along the winter sea ice gradient. Our analyses suggest that IKTF is an inappropriate sea ice estimation approach as its underlying statistical assumptions do not hold and the fit of IKTF to our data under cross-validation was poor. We conclude that MAT may be biased by spatial autocorrelation, and together with IKTF fails to provide unbiased estimates of winter sea ice. We find GAM and WA PLS are more appropriate than IKTF and MAT for the estimation of paleo winter sea ice cover throughout the Southern Ocean. However, as WA PLS is based on a unimodal species response, which is rarely exhibited by diatoms along the winter sea ice gradient, we ultimately advocate the application of GAM. GAM only uses diatoms with a statistically significant association, and ecologically based link, with sea ice. GAM outperformed all other models under cross-validation in terms of performance statistics, the fit of GAM to the training dataset and diagnostic tests for model assumptions. We also demonstrate that GAM provides a more detailed and potentially more accurate (based on a comparison with New Zealand and southeast Australian paleo climatic records) paleo winter ... Article in Journal/Newspaper Sea ice Southern Ocean Institut national des sciences de l'Univers: HAL-INSU Gam ENVELOPE(-57.955,-57.955,-61.923,-61.923) New Zealand Southern Ocean Progress in Oceanography 131 100 112 |
institution |
Open Polar |
collection |
Institut national des sciences de l'Univers: HAL-INSU |
op_collection_id |
ftinsu |
language |
English |
topic |
[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography [SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/Climatology |
spellingShingle |
[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography [SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/Climatology Ferry, Alexander, Prvan, Tania Jersky, Brian Crosta, Xavier Armand, Leanne Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments |
topic_facet |
[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography [SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/Climatology |
description |
International audience We compare the performance of the modern analog technique (MAT), the Imbrie and Kipp transfer function (IKTF), the generalized additive model (GAM) and weighted averaging partial least squares (WA PLS) on a southern hemisphere diatom relative abundance and winter sea ice concentration training data set. All relevant model assumptions are tested with a random 10-fold cross-validation, whilst a hold out cross-validation tested the explanatory power of each model on spatially independent validation data. We used auto correlograms on model residuals, variance partitioning, and principal coordinates analysis of neighbor matrices (PCNM) to investigate the importance of the spatial structure of our training database. A set of hierarchical logistic regression models (or Huisman–Olff–Fresco models) are used to infer the response of each diatom species along the winter sea ice gradient. Our analyses suggest that IKTF is an inappropriate sea ice estimation approach as its underlying statistical assumptions do not hold and the fit of IKTF to our data under cross-validation was poor. We conclude that MAT may be biased by spatial autocorrelation, and together with IKTF fails to provide unbiased estimates of winter sea ice. We find GAM and WA PLS are more appropriate than IKTF and MAT for the estimation of paleo winter sea ice cover throughout the Southern Ocean. However, as WA PLS is based on a unimodal species response, which is rarely exhibited by diatoms along the winter sea ice gradient, we ultimately advocate the application of GAM. GAM only uses diatoms with a statistically significant association, and ecologically based link, with sea ice. GAM outperformed all other models under cross-validation in terms of performance statistics, the fit of GAM to the training dataset and diagnostic tests for model assumptions. We also demonstrate that GAM provides a more detailed and potentially more accurate (based on a comparison with New Zealand and southeast Australian paleo climatic records) paleo winter ... |
author2 |
Department of Biological Sciences North Ryde Macquarie University Environnements et Paléoenvironnements OCéaniques (EPOC) Observatoire aquitain des sciences de l'univers (OASU) Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université Sciences et Technologies - Bordeaux 1 (UB)-Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-École Pratique des Hautes Études (EPHE) Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Centre National de la Recherche Scientifique (CNRS) |
format |
Article in Journal/Newspaper |
author |
Ferry, Alexander, Prvan, Tania Jersky, Brian Crosta, Xavier Armand, Leanne |
author_facet |
Ferry, Alexander, Prvan, Tania Jersky, Brian Crosta, Xavier Armand, Leanne |
author_sort |
Ferry, Alexander, |
title |
Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments |
title_short |
Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments |
title_full |
Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments |
title_fullStr |
Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments |
title_full_unstemmed |
Statistical modeling of Southern Ocean marine diatom proxy and winter sea ice data: Model comparison and developments |
title_sort |
statistical modeling of southern ocean marine diatom proxy and winter sea ice data: model comparison and developments |
publisher |
HAL CCSD |
publishDate |
2015 |
url |
https://hal.science/hal-02105563 https://doi.org/10.1016/j.pocean.2014.12.001 |
long_lat |
ENVELOPE(-57.955,-57.955,-61.923,-61.923) |
geographic |
Gam New Zealand Southern Ocean |
geographic_facet |
Gam New Zealand Southern Ocean |
genre |
Sea ice Southern Ocean |
genre_facet |
Sea ice Southern Ocean |
op_source |
ISSN: 0079-6611 Progress in Oceanography https://hal.science/hal-02105563 Progress in Oceanography, 2015, 131, pp.100-112. ⟨10.1016/j.pocean.2014.12.001⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1016/j.pocean.2014.12.001 hal-02105563 https://hal.science/hal-02105563 doi:10.1016/j.pocean.2014.12.001 |
op_doi |
https://doi.org/10.1016/j.pocean.2014.12.001 |
container_title |
Progress in Oceanography |
container_volume |
131 |
container_start_page |
100 |
op_container_end_page |
112 |
_version_ |
1769009146032553984 |