Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean
International audience The Southern Ocean is a productive and biodiverse region, but it is also threatened by anthropogenic pressures. Protecting the Southern Ocean should start with well-informed Marine Ecosystem Assessments of the Southern Ocean (MEASO) being performed, a process that will require...
Published in: | Frontiers in Marine Science |
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Language: | English |
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Online Access: | https://hal.science/hal-04142764 https://hal.science/hal-04142764/document https://hal.science/hal-04142764/file/BLFMS10_2023.pdf https://doi.org/10.3389/fmars.2023.1150603 |
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ftinraparis:oai:HAL:hal-04142764v1 2024-06-23T07:56:54+00:00 Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean Bonnet-Lebrun, Anne-Sophie Sweetlove, Maxime Griffiths, Huw, J Sumner, Michael Provoost, Pieter Raymond, Ben Ropert-Coudert, Yan van de Putte, Anton, P Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Institut Royal des Sciences Naturelles de Belgique = Royal Belgian Institute of Natural Sciences (IRSNB / RBINS) British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy Institute for Marine and Antarctic Studies Hobart (IMAS) University of Tasmania Hobart, Australia (UTAS) Intergovernmental Oceanographic Commission of UNESCO Université libre de Bruxelles (ULB) 2023 https://hal.science/hal-04142764 https://hal.science/hal-04142764/document https://hal.science/hal-04142764/file/BLFMS10_2023.pdf https://doi.org/10.3389/fmars.2023.1150603 en eng HAL CCSD Frontiers Media info:eu-repo/semantics/altIdentifier/doi/10.3389/fmars.2023.1150603 hal-04142764 https://hal.science/hal-04142764 https://hal.science/hal-04142764/document https://hal.science/hal-04142764/file/BLFMS10_2023.pdf doi:10.3389/fmars.2023.1150603 WOS: 001022931100001 info:eu-repo/semantics/OpenAccess ISSN: 2296-7745 Frontiers in Marine Science https://hal.science/hal-04142764 Frontiers in Marine Science, 2023, 10, pp.1150603. ⟨10.3389/fmars.2023.1150603⟩ OBIS GBIF sampling bias biodiversity data spatial bias temporal bias taxonomic bias [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography info:eu-repo/semantics/article Journal articles 2023 ftinraparis https://doi.org/10.3389/fmars.2023.1150603 2024-06-11T14:49:28Z International audience The Southern Ocean is a productive and biodiverse region, but it is also threatened by anthropogenic pressures. Protecting the Southern Ocean should start with well-informed Marine Ecosystem Assessments of the Southern Ocean (MEASO) being performed, a process that will require biodiversity data. In this context, open geospatial biodiversity databases such as OBIS and GBIF provide good avenues, through aggregated geo-referenced taxon locations. However, like most aggregated databases, these might suffer from sampling biases, which may hinder their usability for a MEASO. Here, we assess the quality and distribution of OBIS and GBIF data in the context of a MEASO. We found strong spatial, temporal and taxonomic biases in these data, with several biases likely emerging from the remoteness and inaccessibility of the Southern Ocean (e.g., lack of data in the dark and ice-covered winter, most data describing charismatic or well-known taxa, and most data along ship routes between research stations and neighboring continents). Our identification of sampling biases helps us provide practical recommendations for future data collection, mobilization, and analyses. Article in Journal/Newspaper Southern Ocean Institut National de la Recherche Agronomique: ProdINRA Southern Ocean Frontiers in Marine Science 10 |
institution |
Open Polar |
collection |
Institut National de la Recherche Agronomique: ProdINRA |
op_collection_id |
ftinraparis |
language |
English |
topic |
OBIS GBIF sampling bias biodiversity data spatial bias temporal bias taxonomic bias [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography |
spellingShingle |
OBIS GBIF sampling bias biodiversity data spatial bias temporal bias taxonomic bias [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography Bonnet-Lebrun, Anne-Sophie Sweetlove, Maxime Griffiths, Huw, J Sumner, Michael Provoost, Pieter Raymond, Ben Ropert-Coudert, Yan van de Putte, Anton, P Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean |
topic_facet |
OBIS GBIF sampling bias biodiversity data spatial bias temporal bias taxonomic bias [SDE.BE]Environmental Sciences/Biodiversity and Ecology [SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography |
description |
International audience The Southern Ocean is a productive and biodiverse region, but it is also threatened by anthropogenic pressures. Protecting the Southern Ocean should start with well-informed Marine Ecosystem Assessments of the Southern Ocean (MEASO) being performed, a process that will require biodiversity data. In this context, open geospatial biodiversity databases such as OBIS and GBIF provide good avenues, through aggregated geo-referenced taxon locations. However, like most aggregated databases, these might suffer from sampling biases, which may hinder their usability for a MEASO. Here, we assess the quality and distribution of OBIS and GBIF data in the context of a MEASO. We found strong spatial, temporal and taxonomic biases in these data, with several biases likely emerging from the remoteness and inaccessibility of the Southern Ocean (e.g., lack of data in the dark and ice-covered winter, most data describing charismatic or well-known taxa, and most data along ship routes between research stations and neighboring continents). Our identification of sampling biases helps us provide practical recommendations for future data collection, mobilization, and analyses. |
author2 |
Centre d'Études Biologiques de Chizé - UMR 7372 (CEBC) La Rochelle Université (ULR)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE) Institut Royal des Sciences Naturelles de Belgique = Royal Belgian Institute of Natural Sciences (IRSNB / RBINS) British Antarctic Survey (BAS) Natural Environment Research Council (NERC) Australian Antarctic Division (AAD) Australian Government, Department of the Environment and Energy Institute for Marine and Antarctic Studies Hobart (IMAS) University of Tasmania Hobart, Australia (UTAS) Intergovernmental Oceanographic Commission of UNESCO Université libre de Bruxelles (ULB) |
format |
Article in Journal/Newspaper |
author |
Bonnet-Lebrun, Anne-Sophie Sweetlove, Maxime Griffiths, Huw, J Sumner, Michael Provoost, Pieter Raymond, Ben Ropert-Coudert, Yan van de Putte, Anton, P |
author_facet |
Bonnet-Lebrun, Anne-Sophie Sweetlove, Maxime Griffiths, Huw, J Sumner, Michael Provoost, Pieter Raymond, Ben Ropert-Coudert, Yan van de Putte, Anton, P |
author_sort |
Bonnet-Lebrun, Anne-Sophie |
title |
Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean |
title_short |
Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean |
title_full |
Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean |
title_fullStr |
Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean |
title_full_unstemmed |
Opportunities and limitations of large open biodiversity occurrence databases in the context of a Marine Ecosystem Assessment of the Southern Ocean |
title_sort |
opportunities and limitations of large open biodiversity occurrence databases in the context of a marine ecosystem assessment of the southern ocean |
publisher |
HAL CCSD |
publishDate |
2023 |
url |
https://hal.science/hal-04142764 https://hal.science/hal-04142764/document https://hal.science/hal-04142764/file/BLFMS10_2023.pdf https://doi.org/10.3389/fmars.2023.1150603 |
geographic |
Southern Ocean |
geographic_facet |
Southern Ocean |
genre |
Southern Ocean |
genre_facet |
Southern Ocean |
op_source |
ISSN: 2296-7745 Frontiers in Marine Science https://hal.science/hal-04142764 Frontiers in Marine Science, 2023, 10, pp.1150603. ⟨10.3389/fmars.2023.1150603⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.3389/fmars.2023.1150603 hal-04142764 https://hal.science/hal-04142764 https://hal.science/hal-04142764/document https://hal.science/hal-04142764/file/BLFMS10_2023.pdf doi:10.3389/fmars.2023.1150603 WOS: 001022931100001 |
op_rights |
info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.3389/fmars.2023.1150603 |
container_title |
Frontiers in Marine Science |
container_volume |
10 |
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1802650271509118976 |