Phylogeography of Puumala orthohantavirus in Europe
International audience Puumala virus is an RNA virus hosted by the bank vole (Myodes glareolus) and is today present in most European countries. Whilst it is generally accepted that hantaviruses have been tightly co-evolving with their hosts, Puumala virus (PUUV) evolutionary history is still contro...
Published in: | Viruses |
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Main Authors: | , , , , , , , |
Other Authors: | , , , , , , , , , , , , , , , , , , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
HAL CCSD
2019
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Subjects: | |
Online Access: | https://hal.inrae.fr/hal-02619120 https://hal.inrae.fr/hal-02619120/document https://hal.inrae.fr/hal-02619120/file/Publis19-cbgp-027_castel_phylogeography_1.pdf https://doi.org/10.3390/v11080679 |
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openpolar |
institution |
Open Polar |
collection |
Institut National de la Recherche Agronomique: ProdINRA |
op_collection_id |
ftinraparis |
language |
English |
topic |
bank vole (myodes glareolus) co-evolution puumala orthohantavirus phylogeography [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology [SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology |
spellingShingle |
bank vole (myodes glareolus) co-evolution puumala orthohantavirus phylogeography [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology [SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology Castel, Guillaume Chevenet, François Razzauti, Maria Murri, Severine Marianneau, Philippe Cosson, Jean-Francois, J.-F. Tordo, Noel Plyusnin, Alexander Phylogeography of Puumala orthohantavirus in Europe |
topic_facet |
bank vole (myodes glareolus) co-evolution puumala orthohantavirus phylogeography [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology [SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology |
description |
International audience Puumala virus is an RNA virus hosted by the bank vole (Myodes glareolus) and is today present in most European countries. Whilst it is generally accepted that hantaviruses have been tightly co-evolving with their hosts, Puumala virus (PUUV) evolutionary history is still controversial and so far has not been studied at the whole European level. This study attempts to reconstruct the phylogeographical spread of modern PUUV throughout Europe during the last postglacial period in the light of an upgraded dataset of complete PUUV small (S) segment sequences and by using most recent computational approaches. Taking advantage of the knowledge on the past migrations of its host, we identified at least three potential independent dispersal routes of PUUV during postglacial recolonization of Europe by the bank vole. From the Alpe-Adrian region (Balkan, Austria, and Hungary) to Western European countries (Germany, France, Belgium, and Netherland), and South Scandinavia. From the vicinity of Carpathian Mountains to the Baltic countries and to Poland, Russia, and Finland. The dissemination towards Denmark and North Scandinavia is more hypothetical and probably involved several independent streams from south and north Fennoscandia. |
author2 |
Centre de Biologie pour la Gestion des Populations (UMR CBGP) Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD France-Sud )-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro) Du gène à l'écosystème (MIVEGEC-GeneSys) Pathogènes, Environnement, Santé Humaine (EPATH) Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC) Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )-Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC) Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud ) Unité Virologie Laboratoire de Lyon ANSES Université de Lyon-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Université de Lyon-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES) Biologie moléculaire et immunologie parasitaires et fongiques (BIPAR) École nationale vétérinaire d'Alfort (ENVA)-Institut National de la Recherche Agronomique (INRA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Normandie Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12) Institut Pasteur de Guinée Réseau International des Instituts Pasteur (RIIP) Stratégies antivirales Institut Pasteur Paris (IP) Department of Virology Helsinki Haartman Institute Helsinki Faculty of Medecine Helsinki Helsingin yliopisto = Helsingfors universitet = University of Helsinki-Helsingin yliopisto = Helsingfors universitet = University of Helsinki-Faculty of Medecine Helsinki Helsingin yliopisto = Helsingfors universitet = University of Helsinki-Helsingin yliopisto = Helsingfors universitet = University of Helsinki PALADIN project through French National Research Agency under the "Investissements d'avenir" program : ANR-10-LABX-04-01 European Project: 278976,EC:FP7:HEALTH,FP7-HEALTH-2011-two-stage,ANTIGONE(2011) |
format |
Article in Journal/Newspaper |
author |
Castel, Guillaume Chevenet, François Razzauti, Maria Murri, Severine Marianneau, Philippe Cosson, Jean-Francois, J.-F. Tordo, Noel Plyusnin, Alexander |
author_facet |
Castel, Guillaume Chevenet, François Razzauti, Maria Murri, Severine Marianneau, Philippe Cosson, Jean-Francois, J.-F. Tordo, Noel Plyusnin, Alexander |
author_sort |
Castel, Guillaume |
title |
Phylogeography of Puumala orthohantavirus in Europe |
title_short |
Phylogeography of Puumala orthohantavirus in Europe |
title_full |
Phylogeography of Puumala orthohantavirus in Europe |
title_fullStr |
Phylogeography of Puumala orthohantavirus in Europe |
title_full_unstemmed |
Phylogeography of Puumala orthohantavirus in Europe |
title_sort |
phylogeography of puumala orthohantavirus in europe |
publisher |
HAL CCSD |
publishDate |
2019 |
url |
https://hal.inrae.fr/hal-02619120 https://hal.inrae.fr/hal-02619120/document https://hal.inrae.fr/hal-02619120/file/Publis19-cbgp-027_castel_phylogeography_1.pdf https://doi.org/10.3390/v11080679 |
genre |
Fennoscandia |
genre_facet |
Fennoscandia |
op_source |
ISSN: 1999-4915 Viruses https://hal.inrae.fr/hal-02619120 Viruses, 2019, 11 (8), pp.1-16. ⟨10.3390/v11080679⟩ |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.3390/v11080679 info:eu-repo/semantics/altIdentifier/pmid/31344894 info:eu-repo/grantAgreement/EC/FP7/278976/EU/ANTIcipating the Global Onset of Novel Epidemics/ANTIGONE hal-02619120 https://hal.inrae.fr/hal-02619120 https://hal.inrae.fr/hal-02619120/document https://hal.inrae.fr/hal-02619120/file/Publis19-cbgp-027_castel_phylogeography_1.pdf doi:10.3390/v11080679 IRD: fdi:010076639 PRODINRA: 483548 PUBMED: 31344894 WOS: 000482993900077 |
op_rights |
http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess |
op_doi |
https://doi.org/10.3390/v11080679 |
container_title |
Viruses |
container_volume |
11 |
container_issue |
8 |
container_start_page |
679 |
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spelling |
ftinraparis:oai:HAL:hal-02619120v1 2024-06-23T07:52:42+00:00 Phylogeography of Puumala orthohantavirus in Europe Castel, Guillaume Chevenet, François Razzauti, Maria Murri, Severine Marianneau, Philippe Cosson, Jean-Francois, J.-F. Tordo, Noel Plyusnin, Alexander Centre de Biologie pour la Gestion des Populations (UMR CBGP) Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Université de Montpellier (UM)-Institut de Recherche pour le Développement (IRD France-Sud )-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro) Du gène à l'écosystème (MIVEGEC-GeneSys) Pathogènes, Environnement, Santé Humaine (EPATH) Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC) Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )-Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle (MIVEGEC) Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud )-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD France-Sud ) Unité Virologie Laboratoire de Lyon ANSES Université de Lyon-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Université de Lyon-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES) Biologie moléculaire et immunologie parasitaires et fongiques (BIPAR) École nationale vétérinaire d'Alfort (ENVA)-Institut National de la Recherche Agronomique (INRA)-Laboratoire de santé animale, sites de Maisons-Alfort et de Normandie Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12) Institut Pasteur de Guinée Réseau International des Instituts Pasteur (RIIP) Stratégies antivirales Institut Pasteur Paris (IP) Department of Virology Helsinki Haartman Institute Helsinki Faculty of Medecine Helsinki Helsingin yliopisto = Helsingfors universitet = University of Helsinki-Helsingin yliopisto = Helsingfors universitet = University of Helsinki-Faculty of Medecine Helsinki Helsingin yliopisto = Helsingfors universitet = University of Helsinki-Helsingin yliopisto = Helsingfors universitet = University of Helsinki PALADIN project through French National Research Agency under the "Investissements d'avenir" program : ANR-10-LABX-04-01 European Project: 278976,EC:FP7:HEALTH,FP7-HEALTH-2011-two-stage,ANTIGONE(2011) 2019 https://hal.inrae.fr/hal-02619120 https://hal.inrae.fr/hal-02619120/document https://hal.inrae.fr/hal-02619120/file/Publis19-cbgp-027_castel_phylogeography_1.pdf https://doi.org/10.3390/v11080679 en eng HAL CCSD MDPI info:eu-repo/semantics/altIdentifier/doi/10.3390/v11080679 info:eu-repo/semantics/altIdentifier/pmid/31344894 info:eu-repo/grantAgreement/EC/FP7/278976/EU/ANTIcipating the Global Onset of Novel Epidemics/ANTIGONE hal-02619120 https://hal.inrae.fr/hal-02619120 https://hal.inrae.fr/hal-02619120/document https://hal.inrae.fr/hal-02619120/file/Publis19-cbgp-027_castel_phylogeography_1.pdf doi:10.3390/v11080679 IRD: fdi:010076639 PRODINRA: 483548 PUBMED: 31344894 WOS: 000482993900077 http://creativecommons.org/licenses/by/ info:eu-repo/semantics/OpenAccess ISSN: 1999-4915 Viruses https://hal.inrae.fr/hal-02619120 Viruses, 2019, 11 (8), pp.1-16. ⟨10.3390/v11080679⟩ bank vole (myodes glareolus) co-evolution puumala orthohantavirus phylogeography [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology [SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE] [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology info:eu-repo/semantics/article Journal articles 2019 ftinraparis https://doi.org/10.3390/v11080679 2024-06-04T15:20:30Z International audience Puumala virus is an RNA virus hosted by the bank vole (Myodes glareolus) and is today present in most European countries. Whilst it is generally accepted that hantaviruses have been tightly co-evolving with their hosts, Puumala virus (PUUV) evolutionary history is still controversial and so far has not been studied at the whole European level. This study attempts to reconstruct the phylogeographical spread of modern PUUV throughout Europe during the last postglacial period in the light of an upgraded dataset of complete PUUV small (S) segment sequences and by using most recent computational approaches. Taking advantage of the knowledge on the past migrations of its host, we identified at least three potential independent dispersal routes of PUUV during postglacial recolonization of Europe by the bank vole. From the Alpe-Adrian region (Balkan, Austria, and Hungary) to Western European countries (Germany, France, Belgium, and Netherland), and South Scandinavia. From the vicinity of Carpathian Mountains to the Baltic countries and to Poland, Russia, and Finland. The dissemination towards Denmark and North Scandinavia is more hypothetical and probably involved several independent streams from south and north Fennoscandia. Article in Journal/Newspaper Fennoscandia Institut National de la Recherche Agronomique: ProdINRA Viruses 11 8 679 |