Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]

Background: Industrialised countries had varied responses to the COVID-19 pandemic, which may lead to different death tolls from COVID-19 and other diseases. Methods: We applied an ensemble of 16 Bayesian probabilistic models to vital statistics data to estimate the number of weekly deaths if the pa...

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Published in:Wellcome Open Research
Main Authors: Kontis, V, Bennett, JE, Parks, RM, Rashid, T, Pearson-Stuttard, J, Asaria, P, Zhou, B, Guillot, M, Mathers, CD, Khang, Y-H, McKee, M, Ezzati, M
Format: Article in Journal/Newspaper
Language:English
Published: F1000Research 2021
Subjects:
Online Access:http://hdl.handle.net/10044/1/95784
https://doi.org/10.12688/wellcomeopenres.17253.2
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spelling ftimperialcol:oai:spiral.imperial.ac.uk:10044/1/95784 2023-05-15T16:52:44+02:00 Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved] Kontis, V Bennett, JE Parks, RM Rashid, T Pearson-Stuttard, J Asaria, P Zhou, B Guillot, M Mathers, CD Khang, Y-H McKee, M Ezzati, M England 2021-10-01 http://hdl.handle.net/10044/1/95784 https://doi.org/10.12688/wellcomeopenres.17253.2 eng eng F1000Research Wellcome Open Research 2398-502X http://hdl.handle.net/10044/1/95784 doi:10.12688/wellcomeopenres.17253.2 © 2022 Kontis V et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. https://creativecommons.org/licenses/by/4.0/ CC-BY Bayesian ensemble modelling Covid-19 Excess mortality SARS-CoV-2 autoregressive models uncertainty Journal Article 2021 ftimperialcol https://doi.org/10.12688/wellcomeopenres.17253.2 2022-03-24T23:41:04Z Background: Industrialised countries had varied responses to the COVID-19 pandemic, which may lead to different death tolls from COVID-19 and other diseases. Methods: We applied an ensemble of 16 Bayesian probabilistic models to vital statistics data to estimate the number of weekly deaths if the pandemic had not occurred for 40 industrialised countries and US states from mid-February 2020 through mid-February 2021. We subtracted these estimates from the actual number of deaths to calculate the impacts of the pandemic on all-cause mortality. Results: Over this year, there were 1,410,300 (95% credible interval 1,267,600-1,579,200) excess deaths in these countries, equivalent to a 15% (14-17) increase, and 141 (127-158) additional deaths per 100,000 people. In Iceland, Australia and New Zealand, mortality was lower than would be expected in the absence of the pandemic, while South Korea and Norway experienced no detectable change. The USA, Czechia, Slovakia and Poland experienced >20% higher mortality. Within the USA, Hawaii experienced no detectable change in mortality and Maine a 5% increase, contrasting with New Jersey, Arizona, Mississippi, Texas, California, Louisiana and New York which experienced >25% higher mortality. Mid-February to the end of May 2020 accounted for over half of excess deaths in Scotland, Spain, England and Wales, Canada, Sweden, Belgium, the Netherlands and Cyprus, whereas mid-September 2020 to mid-February 2021 accounted for >90% of excess deaths in Bulgaria, Croatia, Czechia, Hungary, Latvia, Montenegro, Poland, Slovakia and Slovenia. In USA, excess deaths in the northeast were driven mainly by the first wave, in southern and southwestern states by the summer wave, and in the northern plains by the post-September period. Conclusions: Prior to widespread vaccine-acquired immunity, minimising the overall death toll of the pandemic requires policies and non-pharmaceutical interventions that delay and reduce infections, effective treatments for infected patients, and mechanisms to continue routine health care. Article in Journal/Newspaper Iceland Imperial College London: Spiral Canada New Zealand Norway Wellcome Open Research 6 279
institution Open Polar
collection Imperial College London: Spiral
op_collection_id ftimperialcol
language English
topic Bayesian ensemble modelling
Covid-19
Excess mortality
SARS-CoV-2
autoregressive models
uncertainty
spellingShingle Bayesian ensemble modelling
Covid-19
Excess mortality
SARS-CoV-2
autoregressive models
uncertainty
Kontis, V
Bennett, JE
Parks, RM
Rashid, T
Pearson-Stuttard, J
Asaria, P
Zhou, B
Guillot, M
Mathers, CD
Khang, Y-H
McKee, M
Ezzati, M
Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]
topic_facet Bayesian ensemble modelling
Covid-19
Excess mortality
SARS-CoV-2
autoregressive models
uncertainty
description Background: Industrialised countries had varied responses to the COVID-19 pandemic, which may lead to different death tolls from COVID-19 and other diseases. Methods: We applied an ensemble of 16 Bayesian probabilistic models to vital statistics data to estimate the number of weekly deaths if the pandemic had not occurred for 40 industrialised countries and US states from mid-February 2020 through mid-February 2021. We subtracted these estimates from the actual number of deaths to calculate the impacts of the pandemic on all-cause mortality. Results: Over this year, there were 1,410,300 (95% credible interval 1,267,600-1,579,200) excess deaths in these countries, equivalent to a 15% (14-17) increase, and 141 (127-158) additional deaths per 100,000 people. In Iceland, Australia and New Zealand, mortality was lower than would be expected in the absence of the pandemic, while South Korea and Norway experienced no detectable change. The USA, Czechia, Slovakia and Poland experienced >20% higher mortality. Within the USA, Hawaii experienced no detectable change in mortality and Maine a 5% increase, contrasting with New Jersey, Arizona, Mississippi, Texas, California, Louisiana and New York which experienced >25% higher mortality. Mid-February to the end of May 2020 accounted for over half of excess deaths in Scotland, Spain, England and Wales, Canada, Sweden, Belgium, the Netherlands and Cyprus, whereas mid-September 2020 to mid-February 2021 accounted for >90% of excess deaths in Bulgaria, Croatia, Czechia, Hungary, Latvia, Montenegro, Poland, Slovakia and Slovenia. In USA, excess deaths in the northeast were driven mainly by the first wave, in southern and southwestern states by the summer wave, and in the northern plains by the post-September period. Conclusions: Prior to widespread vaccine-acquired immunity, minimising the overall death toll of the pandemic requires policies and non-pharmaceutical interventions that delay and reduce infections, effective treatments for infected patients, and mechanisms to continue routine health care.
format Article in Journal/Newspaper
author Kontis, V
Bennett, JE
Parks, RM
Rashid, T
Pearson-Stuttard, J
Asaria, P
Zhou, B
Guillot, M
Mathers, CD
Khang, Y-H
McKee, M
Ezzati, M
author_facet Kontis, V
Bennett, JE
Parks, RM
Rashid, T
Pearson-Stuttard, J
Asaria, P
Zhou, B
Guillot, M
Mathers, CD
Khang, Y-H
McKee, M
Ezzati, M
author_sort Kontis, V
title Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]
title_short Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]
title_full Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]
title_fullStr Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]
title_full_unstemmed Lessons learned and lessons missed: impact of the coronavirus disease 2019 (COVID-19) pandemic on all-cause mortality in 40 industrialised countries and US states prior to mass vaccination [version 2; peer review: 2 approved]
title_sort lessons learned and lessons missed: impact of the coronavirus disease 2019 (covid-19) pandemic on all-cause mortality in 40 industrialised countries and us states prior to mass vaccination [version 2; peer review: 2 approved]
publisher F1000Research
publishDate 2021
url http://hdl.handle.net/10044/1/95784
https://doi.org/10.12688/wellcomeopenres.17253.2
op_coverage England
geographic Canada
New Zealand
Norway
geographic_facet Canada
New Zealand
Norway
genre Iceland
genre_facet Iceland
op_relation Wellcome Open Research
2398-502X
http://hdl.handle.net/10044/1/95784
doi:10.12688/wellcomeopenres.17253.2
op_rights © 2022 Kontis V et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
https://creativecommons.org/licenses/by/4.0/
op_rightsnorm CC-BY
op_doi https://doi.org/10.12688/wellcomeopenres.17253.2
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