Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas)
Hucho taimen (Pallas) is an indigenous and endangered cold-water fish in China. To access the genetic diversity of wild breeding parents of this species and promote its breeding selection program, 12 polymorphic EST-SSR markers were developed from its cDNA library by (CA)16 probe and were analyzed o...
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fticar:oai:ojs3.epubs.icar.org.in:article/4831 2023-05-15T16:34:57+02:00 Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) JUN, WANG YOU-YI, KUANG 2011-03-11 application/pdf https://epubs.icar.org.in/index.php/IJAnS/article/view/4831 eng eng Directorate of Knowledge Management in Agriculture https://epubs.icar.org.in/index.php/IJAnS/article/view/4831/2009 https://epubs.icar.org.in/index.php/IJAnS/article/view/4831 Copyright (c) 2014 The Indian Journal of Animal Sciences The Indian Journal of Animal Sciences; Vol. 81 No. 3 (2011) 0367-8318 cDNA library EST-SSR Genetic diversity Hucho taimen (Pallas) info:eu-repo/semantics/article info:eu-repo/semantics/publishedVersion 2011 fticar 2022-09-19T08:31:46Z Hucho taimen (Pallas) is an indigenous and endangered cold-water fish in China. To access the genetic diversity of wild breeding parents of this species and promote its breeding selection program, 12 polymorphic EST-SSR markers were developed from its cDNA library by (CA)16 probe and were analyzed on 66 wild breeding parents. The number of alleles per locus (Na), expected heterozygosity (He) and polymorphism information content (PIC) ranged from 2 to 9, 0.2019 to 0.8542 and 0.1802 to 0.8312 respectively. In total, a new and economical method for EST-SSR was established. The EST-SSR markers characterized in this study will strengthen our interpretation of Hucho taimen and facilitate its breeding selection program to improve the endangered statue of this species. Article in Journal/Newspaper Hucho taimen Indian Agricultural Research Journals ( Indian Council of Agricultural Research) |
institution |
Open Polar |
collection |
Indian Agricultural Research Journals ( Indian Council of Agricultural Research) |
op_collection_id |
fticar |
language |
English |
topic |
cDNA library EST-SSR Genetic diversity Hucho taimen (Pallas) |
spellingShingle |
cDNA library EST-SSR Genetic diversity Hucho taimen (Pallas) JUN, WANG YOU-YI, KUANG Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) |
topic_facet |
cDNA library EST-SSR Genetic diversity Hucho taimen (Pallas) |
description |
Hucho taimen (Pallas) is an indigenous and endangered cold-water fish in China. To access the genetic diversity of wild breeding parents of this species and promote its breeding selection program, 12 polymorphic EST-SSR markers were developed from its cDNA library by (CA)16 probe and were analyzed on 66 wild breeding parents. The number of alleles per locus (Na), expected heterozygosity (He) and polymorphism information content (PIC) ranged from 2 to 9, 0.2019 to 0.8542 and 0.1802 to 0.8312 respectively. In total, a new and economical method for EST-SSR was established. The EST-SSR markers characterized in this study will strengthen our interpretation of Hucho taimen and facilitate its breeding selection program to improve the endangered statue of this species. |
format |
Article in Journal/Newspaper |
author |
JUN, WANG YOU-YI, KUANG |
author_facet |
JUN, WANG YOU-YI, KUANG |
author_sort |
JUN, WANG |
title |
Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) |
title_short |
Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) |
title_full |
Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) |
title_fullStr |
Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) |
title_full_unstemmed |
Development of 12 polymorphic EST-SSR for endangered fish, Hucho taimen (Pallas) |
title_sort |
development of 12 polymorphic est-ssr for endangered fish, hucho taimen (pallas) |
publisher |
Directorate of Knowledge Management in Agriculture |
publishDate |
2011 |
url |
https://epubs.icar.org.in/index.php/IJAnS/article/view/4831 |
genre |
Hucho taimen |
genre_facet |
Hucho taimen |
op_source |
The Indian Journal of Animal Sciences; Vol. 81 No. 3 (2011) 0367-8318 |
op_relation |
https://epubs.icar.org.in/index.php/IJAnS/article/view/4831/2009 https://epubs.icar.org.in/index.php/IJAnS/article/view/4831 |
op_rights |
Copyright (c) 2014 The Indian Journal of Animal Sciences |
_version_ |
1766025070039269376 |