Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic.
Permafrost-affected soils are among the most obvious ecosystems in which current microbial controls on organic matter decomposition are changing as a result of global warming. Warmer conditions in polygonal tundra will lead to a deepening of the seasonal active layer, provoking changes in microbial...
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fthzmuenchen:oai:opus-zb.helmholtz-muenchen.de:32686 2023-05-15T14:52:35+02:00 Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. Frank-Fahle, B. Yergeau, E. Greer, C.W. Lantuit, H. Wagner, D.E. 2014-01-01 application/pdf https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=32686 https://doi.org/10.1371/journal.pone.0084761 eng eng info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0084761 info:eu-repo/semantics/altIdentifier/pmid/24416279 info:eu-repo/semantics/altIdentifier/wos/undefined info:eu-repo/semantics/altIdentifier/isbn/1932-6203 info:eu-repo/semantics/altIden https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=32686 doi:10.1371/journal.pone.0084761 urn:isbn:1932-6203 urn:issn:1932-6203 info:eu-repo/semantics/openAccess PLoS ONE 9:e84761 (2014) Text info:eu-repo/semantics/article 2014 fthzmuenchen https://doi.org/10.1371/journal.pone.0084761 2022-11-20T09:01:07Z Permafrost-affected soils are among the most obvious ecosystems in which current microbial controls on organic matter decomposition are changing as a result of global warming. Warmer conditions in polygonal tundra will lead to a deepening of the seasonal active layer, provoking changes in microbial processes and possibly resulting in exacerbated carbon degradation under increasing anoxic conditions. To identify current microbial assemblages in carbon rich, water saturated permafrost environments, four polygonal tundra sites were investigated on Herschel Island and the Yukon Coast, Western Canadian Arctic. Ion Torrent sequencing of bacterial and archaeal 16S rRNA amplicons revealed the presence of all major microbial soil groups and indicated a local, vertical heterogeneity of the polygonal tundra soil community with increasing depth. Microbial diversity was found to be highest in the surface layers, decreasing towards the permafrost table. Quantitative PCR analysis of functional genes involved in carbon and nitrogen-cycling revealed a high functional potential in the surface layers, decreasing with increasing active layer depth. We observed that soil properties driving microbial diversity and functional potential varied in each study site. These results highlight the small-scale heterogeneity of geomorphologically comparable sites, greatly restricting generalizations about the fate of permafrost-affected environments in a warming Arctic. Article in Journal/Newspaper Arctic Global warming Herschel Herschel Island permafrost Tundra Yukon PuSH - Publikationsserver des Helmholtz Zentrums München Arctic Herschel Island ENVELOPE(-139.089,-139.089,69.583,69.583) Yukon PLoS ONE 9 1 e84761 |
institution |
Open Polar |
collection |
PuSH - Publikationsserver des Helmholtz Zentrums München |
op_collection_id |
fthzmuenchen |
language |
English |
description |
Permafrost-affected soils are among the most obvious ecosystems in which current microbial controls on organic matter decomposition are changing as a result of global warming. Warmer conditions in polygonal tundra will lead to a deepening of the seasonal active layer, provoking changes in microbial processes and possibly resulting in exacerbated carbon degradation under increasing anoxic conditions. To identify current microbial assemblages in carbon rich, water saturated permafrost environments, four polygonal tundra sites were investigated on Herschel Island and the Yukon Coast, Western Canadian Arctic. Ion Torrent sequencing of bacterial and archaeal 16S rRNA amplicons revealed the presence of all major microbial soil groups and indicated a local, vertical heterogeneity of the polygonal tundra soil community with increasing depth. Microbial diversity was found to be highest in the surface layers, decreasing towards the permafrost table. Quantitative PCR analysis of functional genes involved in carbon and nitrogen-cycling revealed a high functional potential in the surface layers, decreasing with increasing active layer depth. We observed that soil properties driving microbial diversity and functional potential varied in each study site. These results highlight the small-scale heterogeneity of geomorphologically comparable sites, greatly restricting generalizations about the fate of permafrost-affected environments in a warming Arctic. |
format |
Article in Journal/Newspaper |
author |
Frank-Fahle, B. Yergeau, E. Greer, C.W. Lantuit, H. Wagner, D.E. |
spellingShingle |
Frank-Fahle, B. Yergeau, E. Greer, C.W. Lantuit, H. Wagner, D.E. Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. |
author_facet |
Frank-Fahle, B. Yergeau, E. Greer, C.W. Lantuit, H. Wagner, D.E. |
author_sort |
Frank-Fahle, B. |
title |
Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. |
title_short |
Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. |
title_full |
Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. |
title_fullStr |
Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. |
title_full_unstemmed |
Microbial functional potential and community composition in permafrost-affected soils of the NW Canadian Arctic. |
title_sort |
microbial functional potential and community composition in permafrost-affected soils of the nw canadian arctic. |
publishDate |
2014 |
url |
https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=32686 https://doi.org/10.1371/journal.pone.0084761 |
long_lat |
ENVELOPE(-139.089,-139.089,69.583,69.583) |
geographic |
Arctic Herschel Island Yukon |
geographic_facet |
Arctic Herschel Island Yukon |
genre |
Arctic Global warming Herschel Herschel Island permafrost Tundra Yukon |
genre_facet |
Arctic Global warming Herschel Herschel Island permafrost Tundra Yukon |
op_source |
PLoS ONE 9:e84761 (2014) |
op_relation |
info:eu-repo/semantics/altIdentifier/doi/10.1371/journal.pone.0084761 info:eu-repo/semantics/altIdentifier/pmid/24416279 info:eu-repo/semantics/altIdentifier/wos/undefined info:eu-repo/semantics/altIdentifier/isbn/1932-6203 info:eu-repo/semantics/altIden https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=32686 doi:10.1371/journal.pone.0084761 urn:isbn:1932-6203 urn:issn:1932-6203 |
op_rights |
info:eu-repo/semantics/openAccess |
op_doi |
https://doi.org/10.1371/journal.pone.0084761 |
container_title |
PLoS ONE |
container_volume |
9 |
container_issue |
1 |
container_start_page |
e84761 |
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1766323821816578048 |