Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)

We estimated phylogenetic relationships among shrews of the Sorex caecutiens/shinto group (Eulipotyphla, Soricidae) from various locations through its range, based on restriction fragment length polymorphism (RFLP) analysis of the nuclear ribosomal RNA gene (rDNA) spacer region. Seven rDNA-RFLP repe...

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Main Authors: Naitoh, Yukako, Iwasa, Masahiro A., Ohdachi, Satoshi D., Han, Sang-Hoon, Suzuki, Hitoshi
Format: Article in Journal/Newspaper
Language:English
Published: Mammalogical Society of Japan
Subjects:
489
Online Access:http://hdl.handle.net/2115/44410
https://doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2
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record_format openpolar
spelling fthokunivhus:oai:eprints.lib.hokudai.ac.jp:2115/44410 2023-05-15T18:08:59+02:00 Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae) Naitoh, Yukako Iwasa, Masahiro A. Ohdachi, Satoshi D. Han, Sang-Hoon Suzuki, Hitoshi http://hdl.handle.net/2115/44410 https://doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2 eng eng Mammalogical Society of Japan http://hdl.handle.net/2115/44410 Mammal Study, 30(2): 101-107 http://dx.doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2 Cheju Island nuclear rDNA RFLP Sorex caecutiens 489 article fthokunivhus https://doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2 2022-11-18T01:02:04Z We estimated phylogenetic relationships among shrews of the Sorex caecutiens/shinto group (Eulipotyphla, Soricidae) from various locations through its range, based on restriction fragment length polymorphism (RFLP) analysis of the nuclear ribosomal RNA gene (rDNA) spacer region. Seven rDNA-RFLP repetitive types (repetypes) were recognized among 15 shrews examined. Restriction patterns of Sorex caecutiens Laxmann, 1788 and S. shinto Thomas, 1905 were distinguishable from each other, but the separation was not statistically supported in the maximum parsimony analysis. The RFLP repetype from Cheju Island was close to that of S. caecutiens from the Eurasian continent, indicating that the shrew of Cheju should be classified as S. caecutiens. Within S. caecutiens, there were two alternative phylogenetic hypotheses. According to a parsimonious tree and a simple network, the Hokkaido population was regarded to be derived from the Sakhalin population, which in turn was derived from the continental population. Alternatively, it was inferred that the continent and Hokkaido populations were firstly separated from the ancestral population, and then shrews from both populations immigrated into Sakhalin and hybridization occurred there. The latter hypothesis seems to be more plausible because it is more congruent with a previous mitochondrial phylogeny. Article in Journal/Newspaper Sakhalin Hokkaido University Collection of Scholarly and Academic Papers (HUSCAP)
institution Open Polar
collection Hokkaido University Collection of Scholarly and Academic Papers (HUSCAP)
op_collection_id fthokunivhus
language English
topic Cheju Island
nuclear rDNA
RFLP
Sorex caecutiens
489
spellingShingle Cheju Island
nuclear rDNA
RFLP
Sorex caecutiens
489
Naitoh, Yukako
Iwasa, Masahiro A.
Ohdachi, Satoshi D.
Han, Sang-Hoon
Suzuki, Hitoshi
Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)
topic_facet Cheju Island
nuclear rDNA
RFLP
Sorex caecutiens
489
description We estimated phylogenetic relationships among shrews of the Sorex caecutiens/shinto group (Eulipotyphla, Soricidae) from various locations through its range, based on restriction fragment length polymorphism (RFLP) analysis of the nuclear ribosomal RNA gene (rDNA) spacer region. Seven rDNA-RFLP repetitive types (repetypes) were recognized among 15 shrews examined. Restriction patterns of Sorex caecutiens Laxmann, 1788 and S. shinto Thomas, 1905 were distinguishable from each other, but the separation was not statistically supported in the maximum parsimony analysis. The RFLP repetype from Cheju Island was close to that of S. caecutiens from the Eurasian continent, indicating that the shrew of Cheju should be classified as S. caecutiens. Within S. caecutiens, there were two alternative phylogenetic hypotheses. According to a parsimonious tree and a simple network, the Hokkaido population was regarded to be derived from the Sakhalin population, which in turn was derived from the continental population. Alternatively, it was inferred that the continent and Hokkaido populations were firstly separated from the ancestral population, and then shrews from both populations immigrated into Sakhalin and hybridization occurred there. The latter hypothesis seems to be more plausible because it is more congruent with a previous mitochondrial phylogeny.
format Article in Journal/Newspaper
author Naitoh, Yukako
Iwasa, Masahiro A.
Ohdachi, Satoshi D.
Han, Sang-Hoon
Suzuki, Hitoshi
author_facet Naitoh, Yukako
Iwasa, Masahiro A.
Ohdachi, Satoshi D.
Han, Sang-Hoon
Suzuki, Hitoshi
author_sort Naitoh, Yukako
title Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)
title_short Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)
title_full Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)
title_fullStr Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)
title_full_unstemmed Restriction fragment length polymorphism of nuclear rDNA in Sorex caecutiens/shinto group (Eulipotyphla, Soricidae)
title_sort restriction fragment length polymorphism of nuclear rdna in sorex caecutiens/shinto group (eulipotyphla, soricidae)
publisher Mammalogical Society of Japan
url http://hdl.handle.net/2115/44410
https://doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2
genre Sakhalin
genre_facet Sakhalin
op_relation http://hdl.handle.net/2115/44410
Mammal Study, 30(2): 101-107
http://dx.doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2
op_doi https://doi.org/10.3106/1348-6160(2005)30[101:RFLPON]2.0.CO;2
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