Comparison between automated analysis of zooplankton using ZooImage and traditional methodology

The objective of this study was to evaluate the accuracy of the ZooImage image analysis system for taxonomic classification of zooplankton samples. For this purpose, automated analysis with the ZooImage software was compared with traditional analysis, using zooplankton samples collected in the Icela...

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Published in:Journal of Plankton Research
Main Authors: Gislason, Astthor, Silva, Teresa
Format: Text
Language:English
Published: Oxford University Press 2009
Subjects:
Online Access:http://plankt.oxfordjournals.org/cgi/content/short/fbp094v1
https://doi.org/10.1093/plankt/fbp094
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spelling fthighwire:oai:open-archive.highwire.org:plankt:fbp094v1 2023-05-15T16:49:55+02:00 Comparison between automated analysis of zooplankton using ZooImage and traditional methodology Gislason, Astthor Silva, Teresa 2009-10-14 07:32:25.0 text/html http://plankt.oxfordjournals.org/cgi/content/short/fbp094v1 https://doi.org/10.1093/plankt/fbp094 en eng Oxford University Press http://plankt.oxfordjournals.org/cgi/content/short/fbp094v1 http://dx.doi.org/10.1093/plankt/fbp094 Copyright (C) 2009, Oxford University Press Article TEXT 2009 fthighwire https://doi.org/10.1093/plankt/fbp094 2016-11-16T18:35:43Z The objective of this study was to evaluate the accuracy of the ZooImage image analysis system for taxonomic classification of zooplankton samples. For this purpose, automated analysis with the ZooImage software was compared with traditional analysis, using zooplankton samples collected in the Iceland Sea in July 2006. When compared with the traditional methodology, ZooImage was able to classify zooplankton into main taxonomic entities (size classes and families or genera in some cases), while being less successful in identifying the zooplankton into species. Other important information, that is difficult and time consuming to obtain by traditional methods such as biomass and size distributions are, however, easily obtained with ZooImage. The automated analysis takes much less time than the traditional methods. While the study confirms that ZooImage is a promising tool for rapidly analysing zooplankton samples, it is also clear that the traditional approach will be needed in future investigations, particularly studies addressing zooplankton community structure, development and life history. Text Iceland HighWire Press (Stanford University) Journal of Plankton Research 31 12 1505 1516
institution Open Polar
collection HighWire Press (Stanford University)
op_collection_id fthighwire
language English
topic Article
spellingShingle Article
Gislason, Astthor
Silva, Teresa
Comparison between automated analysis of zooplankton using ZooImage and traditional methodology
topic_facet Article
description The objective of this study was to evaluate the accuracy of the ZooImage image analysis system for taxonomic classification of zooplankton samples. For this purpose, automated analysis with the ZooImage software was compared with traditional analysis, using zooplankton samples collected in the Iceland Sea in July 2006. When compared with the traditional methodology, ZooImage was able to classify zooplankton into main taxonomic entities (size classes and families or genera in some cases), while being less successful in identifying the zooplankton into species. Other important information, that is difficult and time consuming to obtain by traditional methods such as biomass and size distributions are, however, easily obtained with ZooImage. The automated analysis takes much less time than the traditional methods. While the study confirms that ZooImage is a promising tool for rapidly analysing zooplankton samples, it is also clear that the traditional approach will be needed in future investigations, particularly studies addressing zooplankton community structure, development and life history.
format Text
author Gislason, Astthor
Silva, Teresa
author_facet Gislason, Astthor
Silva, Teresa
author_sort Gislason, Astthor
title Comparison between automated analysis of zooplankton using ZooImage and traditional methodology
title_short Comparison between automated analysis of zooplankton using ZooImage and traditional methodology
title_full Comparison between automated analysis of zooplankton using ZooImage and traditional methodology
title_fullStr Comparison between automated analysis of zooplankton using ZooImage and traditional methodology
title_full_unstemmed Comparison between automated analysis of zooplankton using ZooImage and traditional methodology
title_sort comparison between automated analysis of zooplankton using zooimage and traditional methodology
publisher Oxford University Press
publishDate 2009
url http://plankt.oxfordjournals.org/cgi/content/short/fbp094v1
https://doi.org/10.1093/plankt/fbp094
genre Iceland
genre_facet Iceland
op_relation http://plankt.oxfordjournals.org/cgi/content/short/fbp094v1
http://dx.doi.org/10.1093/plankt/fbp094
op_rights Copyright (C) 2009, Oxford University Press
op_doi https://doi.org/10.1093/plankt/fbp094
container_title Journal of Plankton Research
container_volume 31
container_issue 12
container_start_page 1505
op_container_end_page 1516
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