Correcting density-dependent effects in abundance estimates from bottom-trawl surveys

Indices of abundance are important for estimating population trends in stock assessment and ideally should be based on fishery-independent surveys to avoid problems associated with the hyperstability of the commercial catch per unit effort (cpue) data. However, recent studies indicate that the effic...

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Published in:ICES Journal of Marine Science
Main Authors: Kotwicki, Stan, Ianelli, James N., Punt, André E.
Format: Text
Language:English
Published: Oxford University Press 2014
Subjects:
Online Access:http://icesjms.oxfordjournals.org/cgi/content/short/71/5/1107
https://doi.org/10.1093/icesjms/fst208
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spelling fthighwire:oai:open-archive.highwire.org:icesjms:71/5/1107 2023-05-15T15:43:56+02:00 Correcting density-dependent effects in abundance estimates from bottom-trawl surveys Kotwicki, Stan Ianelli, James N. Punt, André E. 2014-08-01 00:00:00.0 text/html http://icesjms.oxfordjournals.org/cgi/content/short/71/5/1107 https://doi.org/10.1093/icesjms/fst208 en eng Oxford University Press http://icesjms.oxfordjournals.org/cgi/content/short/71/5/1107 http://dx.doi.org/10.1093/icesjms/fst208 Copyright (C) 2014, International Council for the Exploration of the Sea/Conseil International pour l'Exploration de la Mer Original Articles TEXT 2014 fthighwire https://doi.org/10.1093/icesjms/fst208 2015-02-28T22:23:13Z Indices of abundance are important for estimating population trends in stock assessment and ideally should be based on fishery-independent surveys to avoid problems associated with the hyperstability of the commercial catch per unit effort (cpue) data. However, recent studies indicate that the efficiency of the survey bottom trawl (BT) for some species can be density-dependent, which could affect the reliability of survey-derived indices of abundance. A function q e ∼ f ( u ), where q e is the BT efficiency and u the catch rate, was derived using experimentally derived acoustic dead-zone correction and BT efficiency parameters obtained from combining a subset of BT catch data with synchronously collected acoustic data from walleye pollock ( Theragra chalcogramma ) in the eastern Bering Sea (EBS). We found that q e decreased with increasing BT catches resulting in hyperstability of the index of abundance derived from BT survey. Density-dependent q e resulted in spatially and temporarily variable bias in survey cpue and biased population age structure derived from survey data. We used the relationship q e ∼ f ( u ) to correct the EBS trawl survey index of abundance for density-dependence. We also obtained a variance–covariance matrix for a new index that accounted for sampling variability and the uncertainty associated with the q e . We found that incorporating estimates of the new index of abundance changed outputs from the walleye pollock stock assessment model. Although changes were minor, we advocate incorporating estimates of density-dependent q e into the walleye pollock stock assessment as a precautionary measure that should be undertaken to avoid negative consequences of the density-dependent q e . Text Bering Sea Theragra chalcogramma HighWire Press (Stanford University) Bering Sea ICES Journal of Marine Science 71 5 1107 1116
institution Open Polar
collection HighWire Press (Stanford University)
op_collection_id fthighwire
language English
topic Original Articles
spellingShingle Original Articles
Kotwicki, Stan
Ianelli, James N.
Punt, André E.
Correcting density-dependent effects in abundance estimates from bottom-trawl surveys
topic_facet Original Articles
description Indices of abundance are important for estimating population trends in stock assessment and ideally should be based on fishery-independent surveys to avoid problems associated with the hyperstability of the commercial catch per unit effort (cpue) data. However, recent studies indicate that the efficiency of the survey bottom trawl (BT) for some species can be density-dependent, which could affect the reliability of survey-derived indices of abundance. A function q e ∼ f ( u ), where q e is the BT efficiency and u the catch rate, was derived using experimentally derived acoustic dead-zone correction and BT efficiency parameters obtained from combining a subset of BT catch data with synchronously collected acoustic data from walleye pollock ( Theragra chalcogramma ) in the eastern Bering Sea (EBS). We found that q e decreased with increasing BT catches resulting in hyperstability of the index of abundance derived from BT survey. Density-dependent q e resulted in spatially and temporarily variable bias in survey cpue and biased population age structure derived from survey data. We used the relationship q e ∼ f ( u ) to correct the EBS trawl survey index of abundance for density-dependence. We also obtained a variance–covariance matrix for a new index that accounted for sampling variability and the uncertainty associated with the q e . We found that incorporating estimates of the new index of abundance changed outputs from the walleye pollock stock assessment model. Although changes were minor, we advocate incorporating estimates of density-dependent q e into the walleye pollock stock assessment as a precautionary measure that should be undertaken to avoid negative consequences of the density-dependent q e .
format Text
author Kotwicki, Stan
Ianelli, James N.
Punt, André E.
author_facet Kotwicki, Stan
Ianelli, James N.
Punt, André E.
author_sort Kotwicki, Stan
title Correcting density-dependent effects in abundance estimates from bottom-trawl surveys
title_short Correcting density-dependent effects in abundance estimates from bottom-trawl surveys
title_full Correcting density-dependent effects in abundance estimates from bottom-trawl surveys
title_fullStr Correcting density-dependent effects in abundance estimates from bottom-trawl surveys
title_full_unstemmed Correcting density-dependent effects in abundance estimates from bottom-trawl surveys
title_sort correcting density-dependent effects in abundance estimates from bottom-trawl surveys
publisher Oxford University Press
publishDate 2014
url http://icesjms.oxfordjournals.org/cgi/content/short/71/5/1107
https://doi.org/10.1093/icesjms/fst208
geographic Bering Sea
geographic_facet Bering Sea
genre Bering Sea
Theragra chalcogramma
genre_facet Bering Sea
Theragra chalcogramma
op_relation http://icesjms.oxfordjournals.org/cgi/content/short/71/5/1107
http://dx.doi.org/10.1093/icesjms/fst208
op_rights Copyright (C) 2014, International Council for the Exploration of the Sea/Conseil International pour l'Exploration de la Mer
op_doi https://doi.org/10.1093/icesjms/fst208
container_title ICES Journal of Marine Science
container_volume 71
container_issue 5
container_start_page 1107
op_container_end_page 1116
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